RNA–Protein interactions for RNA: ENST00000373380.5

CSMD2-204, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2 BASIC

Gene CSMD2, Length 4,379 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-204ENST00000373380 PCDHA8Q9Y5H6 950 aa11.75□□□□□ -0.53
CSMD2-204ENST00000373380 USH1CQ9Y6N9 552 aa11.75□□□□□ -0.53
CSMD2-204ENST00000373380 PNPLA7Q6ZV29 1317 aa11.75□□□□□ -0.53
CSMD2-204ENST00000373380 FER1L4A9Z1Z3 1794 aa11.75□□□□□ -0.53
CSMD2-204ENST00000373380 LOC102724159A0A0B4J2E5 919 aa11.75□□□□□ -0.53
CSMD2-204ENST00000373380 WDR91A4D1P6 747 aa11.75□□□□□ -0.53
CSMD2-204ENST00000373380 H0YCG3 227 aa11.75□□□□□ -0.53
CSMD2-204ENST00000373380 SAT1P21673 171 aa11.75□□□□□ -0.53
CSMD2-204ENST00000373380 ARHGAP4P98171 946 aa11.75□□□□□ -0.53
CSMD2-204ENST00000373380 TFAMQ00059 246 aaKnown RBP11.75□□□□□ -0.53
CSMD2-204ENST00000373380 PWP2Q15269 919 aaKnown RBP11.75□□□□□ -0.53
CSMD2-204ENST00000373380 ZNF746Q6NUN9 644 aaPredicted RBP11.75□□□□□ -0.53
CSMD2-204ENST00000373380 RAB3IPQ96QF0 476 aaPredicted RBP11.75□□□□□ -0.53
CSMD2-204ENST00000373380 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.75□□□□□ -0.53
CSMD2-204ENST00000373380 HESX1Q9UBX0 185 aa11.75□□□□□ -0.53
CSMD2-204ENST00000373380 CAPN11Q9UMQ6 739 aa11.75□□□□□ -0.53
CSMD2-204ENST00000373380 CACNA1FO60840 1977 aa11.75□□□□□ -0.53
CSMD2-204ENST00000373380 LRRD1A4D1F6 860 aa11.74□□□□□ -0.53
CSMD2-204ENST00000373380 RPS6KA4O75676 772 aa11.74□□□□□ -0.53
CSMD2-204ENST00000373380 INHBAP08476 426 aa11.74□□□□□ -0.53
CSMD2-204ENST00000373380 CUL1Q13616 776 aa11.74□□□□□ -0.53
CSMD2-204ENST00000373380 MTERF2Q49AM1 385 aa11.74□□□□□ -0.53
CSMD2-204ENST00000373380 ZNF710Q8N1W2 664 aa11.74□□□□□ -0.53
CSMD2-204ENST00000373380 LRRC1Q9BTT6 524 aa11.74□□□□□ -0.53
CSMD2-204ENST00000373380 TRIM4Q9C037 500 aa11.74□□□□□ -0.53
CSMD2-204ENST00000373380 BCS1LQ9Y276 419 aa11.74□□□□□ -0.53
CSMD2-204ENST00000373380 PXDNQ92626 1479 aa11.74□□□□□ -0.53
CSMD2-204ENST00000373380 A0A1W2PQC6 194 aa11.74□□□□□ -0.53
CSMD2-204ENST00000373380 HSPA6P17066 643 aa11.74□□□□□ -0.53
CSMD2-204ENST00000373380 OSTNP61366 133 aa11.74□□□□□ -0.53
CSMD2-204ENST00000373380 TBC1D1Q86TI0 1168 aaPredicted RBP11.74□□□□□ -0.53
CSMD2-204ENST00000373380 PROM2Q8N271 834 aa11.74□□□□□ -0.53
CSMD2-204ENST00000373380 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.74□□□□□ -0.53
CSMD2-204ENST00000373380 CALN1Q9BXU9 219 aa11.74□□□□□ -0.53
CSMD2-204ENST00000373380 SUDS3Q9H7L9 328 aaPredicted RBP11.74□□□□□ -0.53
CSMD2-204ENST00000373380 MLXIPLQ9NP71 852 aa11.74□□□□□ -0.53
CSMD2-204ENST00000373380 FMN2Q9NZ56 1722 aa11.74□□□□□ -0.53
CSMD2-204ENST00000373380 LIMA1Q9UHB6 759 aaKnown RBP11.74□□□□□ -0.53
CSMD2-204ENST00000373380 CTIFO43310 598 aaKnown RBP11.74□□□□□ -0.53
CSMD2-204ENST00000373380 COG7P83436 770 aa11.74□□□□□ -0.53
CSMD2-204ENST00000373380 TAF12Q16514 161 aa11.74□□□□□ -0.53
CSMD2-204ENST00000373380 EEPD1Q7L9B9 569 aa11.74□□□□□ -0.53
CSMD2-204ENST00000373380 NCAPG2Q86XI2 1143 aa11.74□□□□□ -0.53
CSMD2-204ENST00000373380 PHF20Q9BVI0 1012 aa11.74□□□□□ -0.53
CSMD2-204ENST00000373380 HEMGNQ9BXL5 484 aa11.74□□□□□ -0.53
CSMD2-204ENST00000373380 TFR2Q9UP52 801 aa11.74□□□□□ -0.53
CSMD2-204ENST00000373380 CRCPO75575 148 aa11.74□□□□□ -0.53
CSMD2-204ENST00000373380 KCNJ6P48051 423 aa11.74□□□□□ -0.53
CSMD2-204ENST00000373380 SLMAPQ14BN4 828 aa11.74□□□□□ -0.53
CSMD2-204ENST00000373380 GLE1Q53GS7 698 aaKnown RBP11.74□□□□□ -0.53
CSMD2-204ENST00000373380 TADA2BQ86TJ2 420 aa11.74□□□□□ -0.53
CSMD2-204ENST00000373380 CLEC10AQ8IUN9 316 aa11.74□□□□□ -0.53
CSMD2-204ENST00000373380 ADSSL1Q8N142 457 aa11.74□□□□□ -0.53
CSMD2-204ENST00000373380 NSUN4Q96CB9 384 aaKnown RBP11.74□□□□□ -0.53
CSMD2-204ENST00000373380 NALCNQ8IZF0 1738 aa11.73□□□□□ -0.53
CSMD2-204ENST00000373380 ORC4O43929 436 aa11.73□□□□□ -0.53
CSMD2-204ENST00000373380 CA4P22748 312 aa11.73□□□□□ -0.53
CSMD2-204ENST00000373380 MAGEA9P43362 315 aa11.73□□□□□ -0.53
CSMD2-204ENST00000373380 MAGOHP61326 146 aaKnown RBP11.73□□□□□ -0.53
CSMD2-204ENST00000373380 DPYDQ12882 1025 aa11.73□□□□□ -0.53
CSMD2-204ENST00000373380 MAP7Q14244 749 aa11.73□□□□□ -0.53
CSMD2-204ENST00000373380 RCN2Q14257 317 aa11.73□□□□□ -0.53
CSMD2-204ENST00000373380 NYAP1Q6ZVC0 841 aa11.73□□□□□ -0.53
CSMD2-204ENST00000373380 GLYCTKQ8IVS8 523 aa11.73□□□□□ -0.53
CSMD2-204ENST00000373380 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.73□□□□□ -0.53
CSMD2-204ENST00000373380 DDX23Q9BUQ8 820 aaKnown RBP11.73□□□□□ -0.53
CSMD2-204ENST00000373380 NRBP2Q9NSY0 501 aa11.73□□□□□ -0.53
CSMD2-204ENST00000373380 SEPT10Q9P0V9 454 aa11.73□□□□□ -0.53
CSMD2-204ENST00000373380 NARFQ9UHQ1 456 aa11.73□□□□□ -0.53
CSMD2-204ENST00000373380 NOD1Q9Y239 953 aa11.73□□□□□ -0.53
CSMD2-204ENST00000373380 RGPD1P0DJD0 1748 aa11.73□□□□□ -0.53
CSMD2-204ENST00000373380 EXOC1LA0A1B0GW35 172 aa11.73□□□□□ -0.53
CSMD2-204ENST00000373380 SLC12A2P55011 1212 aa11.73□□□□□ -0.53
CSMD2-204ENST00000373380 BASP1P80723 227 aaKnown RBP11.73□□□□□ -0.53
CSMD2-204ENST00000373380 LMNB2Q03252 620 aa11.73□□□□□ -0.53
CSMD2-204ENST00000373380 QRICH1Q2TAL8 776 aa11.73□□□□□ -0.53
CSMD2-204ENST00000373380 ZNF394Q53GI3 561 aa11.73□□□□□ -0.53
CSMD2-204ENST00000373380 PHLDB3Q6NSJ2 640 aa11.73□□□□□ -0.53
CSMD2-204ENST00000373380 ARHGEF18Q6ZSZ5 1173 aa11.73□□□□□ -0.53
CSMD2-204ENST00000373380 TRIM50Q86XT4 487 aa11.73□□□□□ -0.53
CSMD2-204ENST00000373380 RFX6Q8HWS3 928 aa11.73□□□□□ -0.53
CSMD2-204ENST00000373380 FOXP4Q8IVH2 680 aaPredicted RBP11.73□□□□□ -0.53
CSMD2-204ENST00000373380 NOA1Q8NC60 698 aaKnown RBP11.73□□□□□ -0.53
CSMD2-204ENST00000373380 GSDMBQ8TAX9 411 aa11.73□□□□□ -0.53
CSMD2-204ENST00000373380 CCT6BQ92526 530 aa11.73□□□□□ -0.53
CSMD2-204ENST00000373380 HAUS1Q96CS2 278 aa11.73□□□□□ -0.53
CSMD2-204ENST00000373380 FUCA2Q9BTY2 467 aa11.73□□□□□ -0.53
CSMD2-204ENST00000373380 CAPN9O14815 690 aa11.73□□□□□ -0.53
CSMD2-204ENST00000373380 KRT1P04264 644 aa11.73□□□□□ -0.53
CSMD2-204ENST00000373380 GYPCP04921 128 aa11.73□□□□□ -0.53
CSMD2-204ENST00000373380 CSF1RP07333 972 aa11.73□□□□□ -0.53
CSMD2-204ENST00000373380 TRIM49P0CI25 452 aa11.73□□□□□ -0.53
CSMD2-204ENST00000373380 TRIM49CP0CI26 452 aa11.73□□□□□ -0.53
CSMD2-204ENST00000373380 RWDD2BP57060 319 aa11.73□□□□□ -0.53
CSMD2-204ENST00000373380 KNOP1Q1ED39 458 aaKnown RBP11.73□□□□□ -0.53
CSMD2-204ENST00000373380 BBS9Q3SYG4 887 aa11.73□□□□□ -0.53
CSMD2-204ENST00000373380 C12orf60Q5U649 245 aa11.73□□□□□ -0.53
CSMD2-204ENST00000373380 RASGRP2Q7LDG7 609 aa11.73□□□□□ -0.53
CSMD2-204ENST00000373380 TDRD3Q9H7E2 651 aaKnown RBP11.73□□□□□ -0.53
CSMD2-204ENST00000373380 CNOT10Q9H9A5 744 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms