RNA–Protein interactions for RNA: ENST00000373243.6

NCDN-202, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-202ENST00000373243 SLFN13Q68D06 897 aa13.12□□□□□ -0.31
NCDN-202ENST00000373243 KCNK18Q7Z418 384 aa13.12□□□□□ -0.31
NCDN-202ENST00000373243 SPATS2Q86XZ4 545 aaKnown RBP13.12□□□□□ -0.31
NCDN-202ENST00000373243 FUKQ8N0W3 1084 aa13.12□□□□□ -0.31
NCDN-202ENST00000373243 ZNF507Q8TCN5 953 aa13.12□□□□□ -0.31
NCDN-202ENST00000373243 MAGOHBQ96A72 148 aaKnown RBP13.12□□□□□ -0.31
NCDN-202ENST00000373243 CELF4Q9BZC1 486 aaKnown RBP13.12□□□□□ -0.31
NCDN-202ENST00000373243 MLXIPLQ9NP71 852 aa13.12□□□□□ -0.31
NCDN-202ENST00000373243 MTRF1LQ9UGC7 380 aaKnown RBP13.12□□□□□ -0.31
NCDN-202ENST00000373243 ASIC3Q9UHC3 531 aa13.12□□□□□ -0.31
NCDN-202ENST00000373243 GNAT1P11488 350 aa13.12□□□□□ -0.31
NCDN-202ENST00000373243 CALCOCO2Q13137 446 aa13.12□□□□□ -0.31
NCDN-202ENST00000373243 DENND2CQ68D51 928 aa13.12□□□□□ -0.31
NCDN-202ENST00000373243 STXBP4Q6ZWJ1 553 aa13.12□□□□□ -0.31
NCDN-202ENST00000373243 ZNF473Q8WTR7 871 aaKnown RBP13.12□□□□□ -0.31
NCDN-202ENST00000373243 EZH1Q92800 747 aaPredicted RBP13.12□□□□□ -0.31
NCDN-202ENST00000373243 CCDC127Q96BQ5 260 aa13.12□□□□□ -0.31
NCDN-202ENST00000373243 CD209Q9NNX6 404 aa13.12□□□□□ -0.31
NCDN-202ENST00000373243 FBXL5Q9UKA1 691 aa13.12□□□□□ -0.31
NCDN-202ENST00000373243 TRPC6Q9Y210 931 aa13.12□□□□□ -0.31
NCDN-202ENST00000373243 ANKRD62A6NC57 917 aa13.12□□□□□ -0.31
NCDN-202ENST00000373243 ZNF263O14978 683 aa13.12□□□□□ -0.31
NCDN-202ENST00000373243 SART1O43290 800 aaKnown RBP13.12□□□□□ -0.31
NCDN-202ENST00000373243 ABCD1P33897 745 aa13.12□□□□□ -0.31
NCDN-202ENST00000373243 GKAP1Q5VSY0 366 aaPredicted RBP13.12□□□□□ -0.31
NCDN-202ENST00000373243 CAPN12Q6ZSI9 719 aa13.12□□□□□ -0.31
NCDN-202ENST00000373243 OTUD6AQ7L8S5 288 aa13.12□□□□□ -0.31
NCDN-202ENST00000373243 GLYCTKQ8IVS8 523 aa13.12□□□□□ -0.31
NCDN-202ENST00000373243 TNFRSF25Q93038 417 aa13.12□□□□□ -0.31
NCDN-202ENST00000373243 MXD3Q9BW11 206 aa13.12□□□□□ -0.31
NCDN-202ENST00000373243 ZMYND12Q9H0C1 365 aa13.12□□□□□ -0.31
NCDN-202ENST00000373243 KDM3AQ9Y4C1 1321 aa13.12□□□□□ -0.31
NCDN-202ENST00000373243 A0A1W2PRG0 241 aa13.11□□□□□ -0.31
NCDN-202ENST00000373243 ANKRD33BA6NCL7 494 aa13.11□□□□□ -0.31
NCDN-202ENST00000373243 TTLL1O95922 423 aa13.11□□□□□ -0.31
NCDN-202ENST00000373243 TPP2P29144 1249 aaPredicted RBP13.11□□□□□ -0.31
NCDN-202ENST00000373243 LSP1P33241 339 aa13.11□□□□□ -0.31
NCDN-202ENST00000373243 SLC8A3P57103 927 aa13.11□□□□□ -0.31
NCDN-202ENST00000373243 SF3B3Q15393 1217 aaKnown RBP13.11□□□□□ -0.31
NCDN-202ENST00000373243 ZNF746Q6NUN9 644 aaPredicted RBP13.11□□□□□ -0.31
NCDN-202ENST00000373243 CLEC4GQ6UXB4 293 aa13.11□□□□□ -0.31
NCDN-202ENST00000373243 SLC51AQ86UW1 340 aa13.11□□□□□ -0.31
NCDN-202ENST00000373243 ADGRF4Q8IZF3 695 aa13.11□□□□□ -0.31
NCDN-202ENST00000373243 SH2D3AQ9BRG2 576 aa13.11□□□□□ -0.31
NCDN-202ENST00000373243 PAPOLBQ9NRJ5 636 aaKnown RBP13.11□□□□□ -0.31
NCDN-202ENST00000373243 GGT7Q9UJ14 662 aa13.11□□□□□ -0.31
NCDN-202ENST00000373243 STK38LQ9Y2H1 464 aa13.11□□□□□ -0.31
NCDN-202ENST00000373243 AFDNP55196 1824 aaKnown RBP13.11□□□□□ -0.31
NCDN-202ENST00000373243 KRT5P13647 590 aa13.11□□□□□ -0.31
NCDN-202ENST00000373243 POLE2P56282 527 aa13.11□□□□□ -0.31
NCDN-202ENST00000373243 MXRA7P84157 204 aa13.11□□□□□ -0.31
NCDN-202ENST00000373243 TBC1D25Q3MII6 688 aa13.11□□□□□ -0.31
NCDN-202ENST00000373243 FAM178BQ8IXR5 827 aa13.11□□□□□ -0.31
NCDN-202ENST00000373243 NEDD1Q8NHV4 660 aa13.11□□□□□ -0.31
NCDN-202ENST00000373243 TLR10Q9BXR5 811 aa13.11□□□□□ -0.31
NCDN-202ENST00000373243 DCCP43146 1447 aa13.11□□□□□ -0.31
NCDN-202ENST00000373243 PYGBP11216 843 aa13.11□□□□□ -0.31
NCDN-202ENST00000373243 AARSP49588 968 aaKnown RBP eCLIP13.11□□□□□ -0.31
NCDN-202ENST00000373243 PAPOLAP51003 745 aaKnown RBP13.11□□□□□ -0.31
NCDN-202ENST00000373243 PTK2Q05397 1052 aa13.11□□□□□ -0.31
NCDN-202ENST00000373243 SBK1Q52WX2 424 aa13.11□□□□□ -0.31
NCDN-202ENST00000373243 ASPRV1Q53RT3 343 aa13.11□□□□□ -0.31
NCDN-202ENST00000373243 BZW1Q7L1Q6 419 aaKnown RBP13.11□□□□□ -0.31
NCDN-202ENST00000373243 FAM186BQ8IYM0 893 aa13.11□□□□□ -0.31
NCDN-202ENST00000373243 CPXCR1Q8N123 301 aa13.11□□□□□ -0.31
NCDN-202ENST00000373243 MMGT1Q8N4V1 131 aa13.11□□□□□ -0.31
NCDN-202ENST00000373243 CCT8L2Q96SF2 557 aa13.11□□□□□ -0.31
NCDN-202ENST00000373243 TRIM51Q9BSJ1 452 aa13.11□□□□□ -0.31
NCDN-202ENST00000373243 HOMER2Q9NSB8 354 aa13.11□□□□□ -0.31
NCDN-202ENST00000373243 LRRC37A3O60309 1634 aa13.1□□□□□ -0.31
NCDN-202ENST00000373243 ARHGEF35A5YM69 484 aa13.1□□□□□ -0.31
NCDN-202ENST00000373243 A6NNZ2 444 aa13.1□□□□□ -0.31
NCDN-202ENST00000373243 TTI1O43156 1089 aa13.1□□□□□ -0.31
NCDN-202ENST00000373243 DIAPH2O60879 1101 aa13.1□□□□□ -0.31
NCDN-202ENST00000373243 SHOX2O60902 331 aaPredicted RBP13.1□□□□□ -0.31
NCDN-202ENST00000373243 PPP1R37O75864 691 aa13.1□□□□□ -0.31
NCDN-202ENST00000373243 TRIM49P0CI25 452 aa13.1□□□□□ -0.31
NCDN-202ENST00000373243 TRIM49CP0CI26 452 aa13.1□□□□□ -0.31
NCDN-202ENST00000373243 TUBB8Q3ZCM7 444 aa13.1□□□□□ -0.31
NCDN-202ENST00000373243 FAM133BQ5BKY9 247 aaKnown RBP13.1□□□□□ -0.31
NCDN-202ENST00000373243 ODR4Q5SWX8 454 aa13.1□□□□□ -0.31
NCDN-202ENST00000373243 SEL1L2Q5TEA6 688 aa13.1□□□□□ -0.31
NCDN-202ENST00000373243 NLRP14Q86W24 1093 aa13.1□□□□□ -0.31
NCDN-202ENST00000373243 LINC00116Q8NCU8 138 aa13.1□□□□□ -0.31
NCDN-202ENST00000373243 WHAMMQ8TF30 809 aa13.1□□□□□ -0.31
NCDN-202ENST00000373243 CDCA7Q9BWT1 371 aaPredicted RBP13.1□□□□□ -0.31
NCDN-202ENST00000373243 BATF3Q9NR55 127 aa13.1□□□□□ -0.31
NCDN-202ENST00000373243 RGL1Q9NZL6 768 aa13.1□□□□□ -0.31
NCDN-202ENST00000373243 TMOD2Q9NZR1 351 aa13.1□□□□□ -0.31
NCDN-202ENST00000373243 RABGAP1Q9Y3P9 1069 aa13.1□□□□□ -0.31
NCDN-202ENST00000373243 DAAM1Q9Y4D1 1078 aa13.1□□□□□ -0.31
NCDN-202ENST00000373243 TAL1P17542 331 aaPredicted RBP13.1□□□□□ -0.31
NCDN-202ENST00000373243 TRIP13Q15645 432 aaPredicted RBP13.1□□□□□ -0.31
NCDN-202ENST00000373243 SLC18A3Q16572 532 aa13.1□□□□□ -0.31
NCDN-202ENST00000373243 CENPPQ6IPU0 288 aa13.1□□□□□ -0.31
NCDN-202ENST00000373243 GSTA5Q7RTV2 222 aa13.1□□□□□ -0.31
NCDN-202ENST00000373243 SYCE1Q8N0S2 351 aa13.1□□□□□ -0.31
NCDN-202ENST00000373243 PPM1KQ8N3J5 372 aa13.1□□□□□ -0.31
NCDN-202ENST00000373243 CASKIN2Q8WXE0 1202 aa13.1□□□□□ -0.31
NCDN-202ENST00000373243 ATP6V1G3Q96LB4 118 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms