RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 THOC1Q96FV9 657 aaKnown RBP14.9□□□□□ -0.02
USP49-201ENST00000373006 FMO2Q99518 471 aa14.9□□□□□ -0.02
USP49-201ENST00000373006 GGT7Q9UJ14 662 aa14.9□□□□□ -0.02
USP49-201ENST00000373006 CCDC188H7C350 402 aa14.89□□□□□ -0.03
USP49-201ENST00000373006 C21orf2O43822 256 aa14.89□□□□□ -0.03
USP49-201ENST00000373006 FLOT1O75955 427 aa14.89□□□□□ -0.03
USP49-201ENST00000373006 TRIM37O94972 964 aa14.89□□□□□ -0.03
USP49-201ENST00000373006 H2AFZP0C0S5 128 aa14.89□□□□□ -0.03
USP49-201ENST00000373006 ABCB4P21439 1286 aa14.89□□□□□ -0.03
USP49-201ENST00000373006 STAT3P40763 770 aa14.89□□□□□ -0.03
USP49-201ENST00000373006 ZNF211Q13398 564 aaPredicted RBP14.89□□□□□ -0.03
USP49-201ENST00000373006 H2AFVQ71UI9 128 aa14.89□□□□□ -0.03
USP49-201ENST00000373006 NT5DC3Q86UY8 548 aa14.89□□□□□ -0.03
USP49-201ENST00000373006 C3orf20Q8ND61 904 aa14.89□□□□□ -0.03
USP49-201ENST00000373006 MTFR1LQ9H019 292 aa14.89□□□□□ -0.03
USP49-201ENST00000373006 BCAS3Q9H6U6 928 aa14.89□□□□□ -0.03
USP49-201ENST00000373006 ARMCX3Q9UH62 379 aaPredicted RBP14.89□□□□□ -0.03
USP49-201ENST00000373006 SPDYE3A6NKU9 549 aa14.89□□□□□ -0.03
USP49-201ENST00000373006 IRF6O14896 467 aa14.89□□□□□ -0.03
USP49-201ENST00000373006 XRCC4Q13426 336 aa14.89□□□□□ -0.03
USP49-201ENST00000373006 ACCSLQ4AC99 568 aa14.89□□□□□ -0.03
USP49-201ENST00000373006 UBAP2Q5T6F2 1119 aaKnown RBP14.89□□□□□ -0.03
USP49-201ENST00000373006 PNMA8AQ86V59 439 aaPredicted RBP14.89□□□□□ -0.03
USP49-201ENST00000373006 NEDD1Q8NHV4 660 aa14.89□□□□□ -0.03
USP49-201ENST00000373006 MYH4Q9Y623 1939 aa14.89□□□□□ -0.03
USP49-201ENST00000373006 BTNL10A8MVZ5 291 aa14.89□□□□□ -0.03
USP49-201ENST00000373006 HGSO14964 777 aaPredicted RBP14.89□□□□□ -0.03
USP49-201ENST00000373006 GFPT2O94808 682 aa14.89□□□□□ -0.03
USP49-201ENST00000373006 MMEP08473 750 aa14.89□□□□□ -0.03
USP49-201ENST00000373006 PAEPP09466 180 aa14.89□□□□□ -0.03
USP49-201ENST00000373006 CLTAP09496 248 aa14.89□□□□□ -0.03
USP49-201ENST00000373006 CCNHP51946 323 aaPredicted RBP14.89□□□□□ -0.03
USP49-201ENST00000373006 PLTPP55058 493 aa14.89□□□□□ -0.03
USP49-201ENST00000373006 FAM133BQ5BKY9 247 aaKnown RBP14.89□□□□□ -0.03
USP49-201ENST00000373006 C10orf76Q5T2E6 689 aa14.89□□□□□ -0.03
USP49-201ENST00000373006 ERMARDQ5T6L9 678 aa14.89□□□□□ -0.03
USP49-201ENST00000373006 DPY19L2P1Q6NXN4 242 aa14.89□□□□□ -0.03
USP49-201ENST00000373006 ZBTB12Q9Y330 459 aaPredicted RBP14.89□□□□□ -0.03
USP49-201ENST00000373006 BHMG1C9JSJ3 638 aaPredicted RBP14.88□□□□□ -0.03
USP49-201ENST00000373006 MEIS1O00470 390 aa14.88□□□□□ -0.03
USP49-201ENST00000373006 DDX3XO00571 662 aaKnown RBP eCLIP14.88□□□□□ -0.03
USP49-201ENST00000373006 CYP11B2P19099 503 aa14.88□□□□□ -0.03
USP49-201ENST00000373006 IFNAR2P48551 515 aa14.88□□□□□ -0.03
USP49-201ENST00000373006 MARSP56192 900 aaKnown RBP14.88□□□□□ -0.03
USP49-201ENST00000373006 ELF3P78545 371 aaPredicted RBP14.88□□□□□ -0.03
USP49-201ENST00000373006 IFI35P80217 286 aaPredicted RBP14.88□□□□□ -0.03
USP49-201ENST00000373006 LACTB2Q53H82 288 aaPredicted RBP14.88□□□□□ -0.03
USP49-201ENST00000373006 PTF1AQ7RTS3 328 aa14.88□□□□□ -0.03
USP49-201ENST00000373006 CCDC197Q8NCU1 140 aa14.88□□□□□ -0.03
USP49-201ENST00000373006 SLITRK6Q9H5Y7 841 aa14.88□□□□□ -0.03
USP49-201ENST00000373006 RIOX1Q9H6W3 641 aa14.88□□□□□ -0.03
USP49-201ENST00000373006 PPP1R9AQ9ULJ8 1098 aa14.88□□□□□ -0.03
USP49-201ENST00000373006 CCT8L1PA6NM43 557 aa14.88□□□□□ -0.03
USP49-201ENST00000373006 AFPP02771 609 aaKnown RBP14.88□□□□□ -0.03
USP49-201ENST00000373006 SLC16A2P36021 539 aa14.88□□□□□ -0.03
USP49-201ENST00000373006 SLCO1A2P46721 670 aa14.88□□□□□ -0.03
USP49-201ENST00000373006 GALCP54803 685 aa14.88□□□□□ -0.03
USP49-201ENST00000373006 ORC2Q13416 577 aaPredicted RBP14.88□□□□□ -0.03
USP49-201ENST00000373006 FAM98CQ17RN3 349 aaKnown RBP14.88□□□□□ -0.03
USP49-201ENST00000373006 TBC1D1Q86TI0 1168 aaPredicted RBP14.88□□□□□ -0.03
USP49-201ENST00000373006 SETDB2Q96T68 719 aa14.88□□□□□ -0.03
USP49-201ENST00000373006 ELAC2Q9BQ52 826 aaKnown RBP14.88□□□□□ -0.03
USP49-201ENST00000373006 TACO1Q9BSH4 297 aaKnown RBP14.88□□□□□ -0.03
USP49-201ENST00000373006 KIF9Q9HAQ2 790 aa14.88□□□□□ -0.03
USP49-201ENST00000373006 SWAP70Q9UH65 585 aa14.88□□□□□ -0.03
USP49-201ENST00000373006 STXBP5LQ9Y2K9 1186 aa14.88□□□□□ -0.03
USP49-201ENST00000373006 SNX24Q9Y343 169 aa14.88□□□□□ -0.03
USP49-201ENST00000373006 LAMB1P07942 1786 aa14.88□□□□□ -0.03
USP49-201ENST00000373006 ESYT2A0FGR8 921 aa14.87□□□□□ -0.03
USP49-201ENST00000373006 POTEFA5A3E0 1075 aa14.87□□□□□ -0.03
USP49-201ENST00000373006 PPIP5K2O43314 1243 aa14.87□□□□□ -0.03
USP49-201ENST00000373006 RAD21O60216 631 aa14.87□□□□□ -0.03
USP49-201ENST00000373006 BUB1BO60566 1050 aaPredicted RBP14.87□□□□□ -0.03
USP49-201ENST00000373006 POTEIP0CG38 1075 aa14.87□□□□□ -0.03
USP49-201ENST00000373006 BTDP43251 543 aa14.87□□□□□ -0.03
USP49-201ENST00000373006 CASP4P49662 377 aa14.87□□□□□ -0.03
USP49-201ENST00000373006 GRIPAP1Q4V328 841 aa14.87□□□□□ -0.03
USP49-201ENST00000373006 ARSHQ5FYA8 562 aa14.87□□□□□ -0.03
USP49-201ENST00000373006 POTEGQ6S5H5 508 aa14.87□□□□□ -0.03
USP49-201ENST00000373006 POTEEQ6S8J3 1075 aa14.87□□□□□ -0.03
USP49-201ENST00000373006 ATP8B4Q8TF62 1192 aa14.87□□□□□ -0.03
USP49-201ENST00000373006 LMBR1Q8WVP7 490 aa14.87□□□□□ -0.03
USP49-201ENST00000373006 ANKRD2Q9GZV1 360 aa14.87□□□□□ -0.03
USP49-201ENST00000373006 KDM4CQ9H3R0 1056 aa14.87□□□□□ -0.03
USP49-201ENST00000373006 ZNF287Q9HBT7 754 aa14.87□□□□□ -0.03
USP49-201ENST00000373006 ERVK-5Q9HDB9 667 aa14.87□□□□□ -0.03
USP49-201ENST00000373006 FAM114A2Q9NRY5 505 aa14.87□□□□□ -0.03
USP49-201ENST00000373006 SUCLA2Q9P2R7 463 aaPredicted RBP14.87□□□□□ -0.03
USP49-201ENST00000373006 MYH7BA7E2Y1 1941 aa14.87□□□□□ -0.03
USP49-201ENST00000373006 CLIC2O15247 247 aa14.87□□□□□ -0.03
USP49-201ENST00000373006 MGRN1O60291 552 aa14.87□□□□□ -0.03
USP49-201ENST00000373006 AKAP3O75969 853 aa14.87□□□□□ -0.03
USP49-201ENST00000373006 XRCC5P13010 732 aaKnown RBP14.87□□□□□ -0.03
USP49-201ENST00000373006 AADACL2Q6P093 401 aa14.87□□□□□ -0.03
USP49-201ENST00000373006 ARMC9Q7Z3E5 817 aa14.87□□□□□ -0.03
USP49-201ENST00000373006 CCDC50Q8IVM0 306 aa14.87□□□□□ -0.03
USP49-201ENST00000373006 GLYCTKQ8IVS8 523 aa14.87□□□□□ -0.03
USP49-201ENST00000373006 LRRC34Q8IZ02 419 aa14.87□□□□□ -0.03
USP49-201ENST00000373006 RASGEF1CQ8N431 466 aa14.87□□□□□ -0.03
USP49-201ENST00000373006 TLCD1Q96CP7 247 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 130.4 ms