RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 UBE2SQ16763 222 aa5.91□□□□□ -1.46
ATG4A-204ENST00000372246 PNMA1Q8ND90 353 aa5.91□□□□□ -1.46
ATG4A-204ENST00000372246 GDAP1Q8TB36 358 aa5.91□□□□□ -1.46
ATG4A-204ENST00000372246 TBCKQ8TEA7 893 aa5.91□□□□□ -1.46
ATG4A-204ENST00000372246 COA7Q96BR5 231 aa5.91□□□□□ -1.46
ATG4A-204ENST00000372246 DHTKD1Q96HY7 919 aaPredicted RBP5.91□□□□□ -1.46
ATG4A-204ENST00000372246 CRAMP1Q96RY5 1269 aa5.91□□□□□ -1.46
ATG4A-204ENST00000372246 TRIM6Q9C030 488 aaPredicted RBP5.91□□□□□ -1.46
ATG4A-204ENST00000372246 ADAM7Q9H2U9 754 aa5.91□□□□□ -1.46
ATG4A-204ENST00000372246 MCM9Q9NXL9 1143 aa5.91□□□□□ -1.46
ATG4A-204ENST00000372246 TMOD4Q9NZQ9 345 aa5.91□□□□□ -1.46
ATG4A-204ENST00000372246 CTNNAL1Q9UBT7 734 aa5.91□□□□□ -1.46
ATG4A-204ENST00000372246 SNX24Q9Y343 169 aa5.91□□□□□ -1.46
ATG4A-204ENST00000372246 FRMPD2Q68DX3 1309 aaPredicted RBP5.91□□□□□ -1.46
ATG4A-204ENST00000372246 IGSF9BQ9UPX0 1349 aa5.91□□□□□ -1.46
ATG4A-204ENST00000372246 SPDYE3A6NKU9 549 aa5.91□□□□□ -1.46
ATG4A-204ENST00000372246 E9PMD0 336 aa5.91□□□□□ -1.46
ATG4A-204ENST00000372246 PPIP5K2O43314 1243 aa5.91□□□□□ -1.46
ATG4A-204ENST00000372246 EDIL3O43854 480 aa5.91□□□□□ -1.46
ATG4A-204ENST00000372246 TRIM37O94972 964 aa5.91□□□□□ -1.46
ATG4A-204ENST00000372246 GH1P01241 217 aa5.91□□□□□ -1.46
ATG4A-204ENST00000372246 KRT16P08779 473 aa5.91□□□□□ -1.46
ATG4A-204ENST00000372246 ALDH5A1P51649 535 aaPredicted RBP5.91□□□□□ -1.46
ATG4A-204ENST00000372246 MECOMQ03112 1051 aa5.91□□□□□ -1.46
ATG4A-204ENST00000372246 RPS6KA1Q15418 735 aa5.91□□□□□ -1.46
ATG4A-204ENST00000372246 DIXDC1Q155Q3 683 aa5.91□□□□□ -1.46
ATG4A-204ENST00000372246 GLE1Q53GS7 698 aaKnown RBP5.91□□□□□ -1.46
ATG4A-204ENST00000372246 SOGA3Q5TF21 947 aa5.91□□□□□ -1.46
ATG4A-204ENST00000372246 GKAP1Q5VSY0 366 aaPredicted RBP5.91□□□□□ -1.46
ATG4A-204ENST00000372246 SFMBT2Q5VUG0 894 aa5.91□□□□□ -1.46
ATG4A-204ENST00000372246 ZNF662Q6ZS27 426 aa5.91□□□□□ -1.46
ATG4A-204ENST00000372246 BZW1Q7L1Q6 419 aaKnown RBP5.91□□□□□ -1.46
ATG4A-204ENST00000372246 TMC3Q7Z5M5 1100 aa5.91□□□□□ -1.46
ATG4A-204ENST00000372246 DAAM2Q86T65 1068 aa5.91□□□□□ -1.46
ATG4A-204ENST00000372246 LMBR1Q8WVP7 490 aa5.91□□□□□ -1.46
ATG4A-204ENST00000372246 ANKS1AQ92625 1134 aa5.91□□□□□ -1.46
ATG4A-204ENST00000372246 BORCS6Q96GS4 357 aa5.91□□□□□ -1.46
ATG4A-204ENST00000372246 EPB41L4BQ9H329 900 aa5.91□□□□□ -1.46
ATG4A-204ENST00000372246 SEMA4AQ9H3S1 761 aa5.91□□□□□ -1.46
ATG4A-204ENST00000372246 PIDD1Q9HB75 910 aa5.91□□□□□ -1.46
ATG4A-204ENST00000372246 DCP1AQ9NPI6 582 aaPredicted RBP5.91□□□□□ -1.46
ATG4A-204ENST00000372246 PLCB1Q9NQ66 1216 aa5.91□□□□□ -1.46
ATG4A-204ENST00000372246 A1CFQ9NQ94 594 aaKnown RBP5.91□□□□□ -1.46
ATG4A-204ENST00000372246 PRDM11Q9NQV5 511 aa5.91□□□□□ -1.46
ATG4A-204ENST00000372246 MAD2L2Q9UI95 211 aa5.91□□□□□ -1.46
ATG4A-204ENST00000372246 SLIT3O75094 1523 aa5.91□□□□□ -1.46
ATG4A-204ENST00000372246 KCPQ6ZWJ8 1503 aa5.91□□□□□ -1.46
ATG4A-204ENST00000372246 TNS3Q68CZ2 1445 aa5.91□□□□□ -1.46
ATG4A-204ENST00000372246 NID2Q14112 1375 aa5.9□□□□□ -1.46
ATG4A-204ENST00000372246 CAMTA1Q9Y6Y1 1673 aa5.9□□□□□ -1.46
ATG4A-204ENST00000372246 PNPLA7Q6ZV29 1317 aa5.9□□□□□ -1.46
ATG4A-204ENST00000372246 A0A1W2PQJ5 194 aa5.9□□□□□ -1.46
ATG4A-204ENST00000372246 TMEM110-MUSTN1A8MSY1 372 aa5.9□□□□□ -1.46
ATG4A-204ENST00000372246 ANKRD63C9JTQ0 380 aa5.9□□□□□ -1.46
ATG4A-204ENST00000372246 F8VZ95 297 aa5.9□□□□□ -1.46
ATG4A-204ENST00000372246 M0R2N6 131 aa5.9□□□□□ -1.46
ATG4A-204ENST00000372246 STXBP3O00186 592 aa5.9□□□□□ -1.46
ATG4A-204ENST00000372246 IGF2BP3O00425 579 aaKnown RBP eCLIP5.9□□□□□ -1.46
ATG4A-204ENST00000372246 MGRN1O60291 552 aa5.9□□□□□ -1.46
ATG4A-204ENST00000372246 FGGP02679 453 aa5.9□□□□□ -1.46
ATG4A-204ENST00000372246 CFHP08603 1231 aa5.9□□□□□ -1.46
ATG4A-204ENST00000372246 OR52Z1P0C646 297 aa5.9□□□□□ -1.46
ATG4A-204ENST00000372246 PRLRP16471 622 aa5.9□□□□□ -1.46
ATG4A-204ENST00000372246 POLD1P28340 1107 aa5.9□□□□□ -1.46
ATG4A-204ENST00000372246 HNRNPH3P31942 346 aaKnown RBP5.9□□□□□ -1.46
ATG4A-204ENST00000372246 ABL2P42684 1182 aa5.9□□□□□ -1.46
ATG4A-204ENST00000372246 SSR1P43307 286 aaKnown RBP5.9□□□□□ -1.46
ATG4A-204ENST00000372246 MARCKSL1P49006 195 aa5.9□□□□□ -1.46
ATG4A-204ENST00000372246 NAPAP54920 295 aa5.9□□□□□ -1.46
ATG4A-204ENST00000372246 KCNA1Q09470 495 aa5.9□□□□□ -1.46
ATG4A-204ENST00000372246 MAN2A1Q16706 1144 aa5.9□□□□□ -1.46
ATG4A-204ENST00000372246 DCAF12L1Q5VU92 463 aa5.9□□□□□ -1.46
ATG4A-204ENST00000372246 PPP4R3AQ6IN85 833 aa5.9□□□□□ -1.46
ATG4A-204ENST00000372246 CENPPQ6IPU0 288 aa5.9□□□□□ -1.46
ATG4A-204ENST00000372246 YTHDF3Q7Z739 585 aaKnown RBP5.9□□□□□ -1.46
ATG4A-204ENST00000372246 PRUNE1Q86TP1 453 aa5.9□□□□□ -1.46
ATG4A-204ENST00000372246 CCDC25Q86WR0 208 aa5.9□□□□□ -1.46
ATG4A-204ENST00000372246 PALB2Q86YC2 1186 aa5.9□□□□□ -1.46
ATG4A-204ENST00000372246 ANKRD42Q8N9B4 389 aa5.9□□□□□ -1.46
ATG4A-204ENST00000372246 CUL5Q93034 780 aa5.9□□□□□ -1.46
ATG4A-204ENST00000372246 XPO6Q96QU8 1125 aaKnown RBP5.9□□□□□ -1.46
ATG4A-204ENST00000372246 ISCUQ9H1K1 167 aa5.9□□□□□ -1.46
ATG4A-204ENST00000372246 TCP11L1Q9NUJ3 509 aa5.9□□□□□ -1.46
ATG4A-204ENST00000372246 SLAIN2Q9P270 581 aa5.9□□□□□ -1.46
ATG4A-204ENST00000372246 NKX1-2Q9UD57 310 aaPredicted RBP5.9□□□□□ -1.46
ATG4A-204ENST00000372246 PTPN22Q9Y2R2 807 aa5.9□□□□□ -1.46
ATG4A-204ENST00000372246 NUP188Q5SRE5 1749 aa5.9□□□□□ -1.46
ATG4A-204ENST00000372246 DISP2A7MBM2 1401 aa5.9□□□□□ -1.46
ATG4A-204ENST00000372246 A0A1B0GVG6 124 aa5.9□□□□□ -1.47
ATG4A-204ENST00000372246 TCRBV7S2A1N4TA0A589 114 aa5.9□□□□□ -1.47
ATG4A-204ENST00000372246 BICDL2A1A5D9 508 aa5.9□□□□□ -1.47
ATG4A-204ENST00000372246 CCT8L1PA6NM43 557 aa5.9□□□□□ -1.47
ATG4A-204ENST00000372246 SFI1A8K8P3 1242 aa5.9□□□□□ -1.47
ATG4A-204ENST00000372246 MEIS1O00470 390 aa5.9□□□□□ -1.47
ATG4A-204ENST00000372246 KIF1CO43896 1103 aaKnown RBP5.9□□□□□ -1.47
ATG4A-204ENST00000372246 ORC4O43929 436 aa5.9□□□□□ -1.47
ATG4A-204ENST00000372246 LCA5LO95447 670 aa5.9□□□□□ -1.47
ATG4A-204ENST00000372246 BMP15O95972 392 aa5.9□□□□□ -1.47
ATG4A-204ENST00000372246 PDHA1P08559 390 aa5.9□□□□□ -1.47
ATG4A-204ENST00000372246 MYBP10242 640 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms