RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 MED10Q9BTT4 135 aa18.41■□□□□ 0.54
PTP4A1-201ENST00000370651 PPARGC1AQ9UBK2 798 aaKnown RBP18.41■□□□□ 0.54
PTP4A1-201ENST00000370651 ITIH6Q6UXX5 1313 aa18.41■□□□□ 0.54
PTP4A1-201ENST00000370651 SPAG7O75391 227 aa18.41■□□□□ 0.54
PTP4A1-201ENST00000370651 PDE6BP35913 854 aa18.41■□□□□ 0.54
PTP4A1-201ENST00000370651 PCGF5Q86SE9 256 aa18.41■□□□□ 0.54
PTP4A1-201ENST00000370651 SFR1Q86XK3 245 aa18.41■□□□□ 0.54
PTP4A1-201ENST00000370651 SH2D3CQ8N5H7 860 aa18.41■□□□□ 0.54
PTP4A1-201ENST00000370651 TTC17Q96AE7 1141 aa18.41■□□□□ 0.54
PTP4A1-201ENST00000370651 DRC3Q9H069 523 aa18.41■□□□□ 0.54
PTP4A1-201ENST00000370651 CNOT8Q9UFF9 292 aaKnown RBP18.41■□□□□ 0.54
PTP4A1-201ENST00000370651 ZFP69BQ9UJL9 534 aa18.41■□□□□ 0.54
PTP4A1-201ENST00000370651 MGEA5O60502 916 aa18.4■□□□□ 0.54
PTP4A1-201ENST00000370651 NCF2P19878 526 aaPredicted RBP18.4■□□□□ 0.54
PTP4A1-201ENST00000370651 KCNB1Q14721 858 aa18.4■□□□□ 0.54
PTP4A1-201ENST00000370651 KCTD6Q8NC69 237 aa18.4■□□□□ 0.54
PTP4A1-201ENST00000370651 SLC7A3Q8WY07 619 aa18.4■□□□□ 0.54
PTP4A1-201ENST00000370651 CEP170P1Q96L14 293 aa18.4■□□□□ 0.54
PTP4A1-201ENST00000370651 FAM167BQ9BTA0 163 aa18.4■□□□□ 0.54
PTP4A1-201ENST00000370651 PREX2Q70Z35 1606 aa18.4■□□□□ 0.54
PTP4A1-201ENST00000370651 SFI1A8K8P3 1242 aa18.4■□□□□ 0.54
PTP4A1-201ENST00000370651 CTTNQ14247 550 aaKnown RBP18.4■□□□□ 0.54
PTP4A1-201ENST00000370651 FBXW10Q5XX13 1052 aa18.4■□□□□ 0.54
PTP4A1-201ENST00000370651 PDXDC1Q6P996 788 aa18.4■□□□□ 0.54
PTP4A1-201ENST00000370651 TRAIPQ9BWF2 469 aa18.4■□□□□ 0.54
PTP4A1-201ENST00000370651 ZRANB2O95218 330 aaKnown RBP eCLIP18.4■□□□□ 0.54
PTP4A1-201ENST00000370651 STMN1P16949 149 aa18.4■□□□□ 0.54
PTP4A1-201ENST00000370651 STAG2Q8N3U4 1231 aa18.4■□□□□ 0.54
PTP4A1-201ENST00000370651 RIN2Q8WYP3 895 aaPredicted RBP18.4■□□□□ 0.54
PTP4A1-201ENST00000370651 CALR3Q96L12 384 aaKnown RBP18.4■□□□□ 0.54
PTP4A1-201ENST00000370651 SERPINI1Q99574 410 aa18.4■□□□□ 0.54
PTP4A1-201ENST00000370651 ECT2Q9H8V3 914 aa18.4■□□□□ 0.54
PTP4A1-201ENST00000370651 HPCAL4Q9UM19 191 aa18.4■□□□□ 0.54
PTP4A1-201ENST00000370651 SCINQ9Y6U3 715 aa18.4■□□□□ 0.54
PTP4A1-201ENST00000370651 PDHA1P08559 390 aa18.4■□□□□ 0.54
PTP4A1-201ENST00000370651 MUM1L1Q5H9M0 696 aa18.4■□□□□ 0.54
PTP4A1-201ENST00000370651 CRLF3Q8IUI8 442 aa18.4■□□□□ 0.54
PTP4A1-201ENST00000370651 ADCY10Q96PN6 1610 aa18.39■□□□□ 0.54
PTP4A1-201ENST00000370651 SYNJ2BP-COX16A0A087WUM0 186 aa18.39■□□□□ 0.53
PTP4A1-201ENST00000370651 KRT37O76014 449 aa18.39■□□□□ 0.53
PTP4A1-201ENST00000370651 TGS1Q96RS0 853 aaKnown RBP18.39■□□□□ 0.53
PTP4A1-201ENST00000370651 CCT8L2Q96SF2 557 aa18.39■□□□□ 0.53
PTP4A1-201ENST00000370651 HAUS8Q9BT25 410 aa18.39■□□□□ 0.53
PTP4A1-201ENST00000370651 COX16Q9P0S2 106 aa18.39■□□□□ 0.53
PTP4A1-201ENST00000370651 GOLGA8IPA6NC78 632 aa18.39■□□□□ 0.53
PTP4A1-201ENST00000370651 GOLGA8JA6NMD2 632 aa18.39■□□□□ 0.53
PTP4A1-201ENST00000370651 CYP2D6P10635 497 aa18.39■□□□□ 0.53
PTP4A1-201ENST00000370651 ZNF473Q8WTR7 871 aaKnown RBP18.39■□□□□ 0.53
PTP4A1-201ENST00000370651 CFAP36Q96G28 342 aa18.39■□□□□ 0.53
PTP4A1-201ENST00000370651 CLEC11AQ9Y240 323 aa18.39■□□□□ 0.53
PTP4A1-201ENST00000370651 ANKARQ7Z5J8 1434 aa18.39■□□□□ 0.53
PTP4A1-201ENST00000370651 TJP3O95049 919 aa18.39■□□□□ 0.53
PTP4A1-201ENST00000370651 PHEXP78562 749 aa18.39■□□□□ 0.53
PTP4A1-201ENST00000370651 TMPRSS15P98073 1019 aa18.39■□□□□ 0.53
PTP4A1-201ENST00000370651 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.39■□□□□ 0.534e-8■■□□□ 12.8
PTP4A1-201ENST00000370651 L2HGDHQ9H9P8 463 aa18.39■□□□□ 0.53
PTP4A1-201ENST00000370651 BAG5Q9UL15 447 aa18.39■□□□□ 0.53
PTP4A1-201ENST00000370651 IQGAP3Q86VI3 1631 aa18.39■□□□□ 0.53
PTP4A1-201ENST00000370651 E9PMD0 336 aa18.39■□□□□ 0.53
PTP4A1-201ENST00000370651 SYDE2Q5VT97 1194 aa18.39■□□□□ 0.53
PTP4A1-201ENST00000370651 TBC1D9BQ66K14 1250 aa18.39■□□□□ 0.53
PTP4A1-201ENST00000370651 TMEM47Q9BQJ4 181 aa18.39■□□□□ 0.53
PTP4A1-201ENST00000370651 NACA2Q9H009 215 aa18.39■□□□□ 0.53
PTP4A1-201ENST00000370651 CCDC68Q9H2F9 335 aa18.39■□□□□ 0.53
PTP4A1-201ENST00000370651 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.39■□□□□ 0.53
PTP4A1-201ENST00000370651 PALLDQ8WX93 1383 aa18.38■□□□□ 0.53
PTP4A1-201ENST00000370651 HAUS5O94927 633 aa18.38■□□□□ 0.53
PTP4A1-201ENST00000370651 ARL4CP56559 192 aa18.38■□□□□ 0.53
PTP4A1-201ENST00000370651 LRRC14Q15048 493 aa18.38■□□□□ 0.53
PTP4A1-201ENST00000370651 ANKRD36BP1Q96IX9 119 aa18.38■□□□□ 0.53
PTP4A1-201ENST00000370651 AS3MTQ9HBK9 375 aa18.38■□□□□ 0.53
PTP4A1-201ENST00000370651 XAB2Q9HCS7 855 aaKnown RBP18.38■□□□□ 0.53
PTP4A1-201ENST00000370651 AMACRQ9UHK6 382 aa18.38■□□□□ 0.53
PTP4A1-201ENST00000370651 TLK1Q9UKI8 766 aa18.38■□□□□ 0.53
PTP4A1-201ENST00000370651 GUCY1A2P33402 732 aa18.38■□□□□ 0.53
PTP4A1-201ENST00000370651 TNFAIP1Q13829 316 aa18.38■□□□□ 0.53
PTP4A1-201ENST00000370651 WDR75Q8IWA0 830 aaKnown RBP18.38■□□□□ 0.53
PTP4A1-201ENST00000370651 NCAPGQ9BPX3 1015 aa18.38■□□□□ 0.53
PTP4A1-201ENST00000370651 HEMGNQ9BXL5 484 aa18.38■□□□□ 0.53
PTP4A1-201ENST00000370651 TET3O43151 1660 aa18.38■□□□□ 0.53
PTP4A1-201ENST00000370651 COPEO14579 308 aa18.38■□□□□ 0.53
PTP4A1-201ENST00000370651 KIF1CO43896 1103 aaKnown RBP18.38■□□□□ 0.53
PTP4A1-201ENST00000370651 ORC2Q13416 577 aaPredicted RBP18.38■□□□□ 0.53
PTP4A1-201ENST00000370651 ART3Q13508 389 aa18.38■□□□□ 0.53
PTP4A1-201ENST00000370651 PRKG1Q13976 671 aa18.38■□□□□ 0.53
PTP4A1-201ENST00000370651 DCLK2Q8N568 766 aa18.38■□□□□ 0.53
PTP4A1-201ENST00000370651 DNAAF3Q8N9W5 541 aa18.38■□□□□ 0.53
PTP4A1-201ENST00000370651 MCUQ8NE86 351 aa18.38■□□□□ 0.53
PTP4A1-201ENST00000370651 CFLARO15519 480 aa18.38■□□□□ 0.53
PTP4A1-201ENST00000370651 CHGBP05060 677 aa18.38■□□□□ 0.53
PTP4A1-201ENST00000370651 PRPSAP1Q14558 356 aa18.38■□□□□ 0.53
PTP4A1-201ENST00000370651 CAPRIN2Q6IMN6 1127 aaKnown RBP18.38■□□□□ 0.53
PTP4A1-201ENST00000370651 CCNYQ8ND76 341 aa18.38■□□□□ 0.53
PTP4A1-201ENST00000370651 CXorf38Q8TB03 319 aa18.38■□□□□ 0.53
PTP4A1-201ENST00000370651 TTC25Q96NG3 672 aa18.38■□□□□ 0.53
PTP4A1-201ENST00000370651 G3BP2Q9UN86 482 aaKnown RBP18.38■□□□□ 0.53
PTP4A1-201ENST00000370651 ANKRD40Q6AI12 368 aa18.37■□□□□ 0.53
PTP4A1-201ENST00000370651 HIPK4Q8NE63 616 aa18.37■□□□□ 0.53
PTP4A1-201ENST00000370651 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.37■□□□□ 0.53
PTP4A1-201ENST00000370651 WDR17Q8IZU2 1322 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms