RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 HSPA4P34932 840 aa16.81■□□□□ 0.28
LMO4-201ENST00000370542 ARHGAP4P98171 946 aa16.81■□□□□ 0.28
LMO4-201ENST00000370542 CYP2W1Q8TAV3 490 aa16.81■□□□□ 0.28
LMO4-201ENST00000370542 CRYGNQ8WXF5 182 aa16.81■□□□□ 0.28
LMO4-201ENST00000370542 TCEANC2Q96MN5 208 aa16.81■□□□□ 0.28
LMO4-201ENST00000370542 AGXT2Q9BYV1 514 aa16.81■□□□□ 0.28
LMO4-201ENST00000370542 GLT8D2Q9H1C3 349 aa16.81■□□□□ 0.28
LMO4-201ENST00000370542 V9GY48 417 aaPredicted RBP16.81■□□□□ 0.28
LMO4-201ENST00000370542 POTEB3A0JP26 581 aa16.8■□□□□ 0.28
LMO4-201ENST00000370542 SMTNL1A8MU46 457 aa16.8■□□□□ 0.28
LMO4-201ENST00000370542 MEIS1O00470 390 aa16.8■□□□□ 0.28
LMO4-201ENST00000370542 RPLP2P05387 115 aaKnown RBP16.8■□□□□ 0.28
LMO4-201ENST00000370542 CTSHP09668 335 aa16.8■□□□□ 0.28
LMO4-201ENST00000370542 SREBF1P36956 1147 aa16.8■□□□□ 0.28
LMO4-201ENST00000370542 SP4Q02446 784 aa16.8■□□□□ 0.28
LMO4-201ENST00000370542 AP3B2Q13367 1082 aa16.8■□□□□ 0.28
LMO4-201ENST00000370542 GRIK4Q16099 956 aa16.8■□□□□ 0.28
LMO4-201ENST00000370542 CEP55Q53EZ4 464 aa16.8■□□□□ 0.28
LMO4-201ENST00000370542 POTEBQ6S5H4 581 aa16.8■□□□□ 0.28
LMO4-201ENST00000370542 RUFY4Q6ZNE9 571 aa16.8■□□□□ 0.28
LMO4-201ENST00000370542 PLPPR4Q7Z2D5 763 aa16.8■□□□□ 0.28
LMO4-201ENST00000370542 JPH1Q9HDC5 661 aaPredicted RBP16.8■□□□□ 0.28
LMO4-201ENST00000370542 SH2B1Q9NRF2 756 aaPredicted RBP16.8■□□□□ 0.28
LMO4-201ENST00000370542 SLC9A2Q9UBY0 812 aa16.8■□□□□ 0.28
LMO4-201ENST00000370542 IGKV6D-21A0A0A0MT36 114 aa16.79■□□□□ 0.28
LMO4-201ENST00000370542 KLF18A0A0U1RQI7 1052 aa16.79■□□□□ 0.28
LMO4-201ENST00000370542 NAPAP54920 295 aa16.79■□□□□ 0.28
LMO4-201ENST00000370542 PPFIA1Q13136 1202 aa16.79■□□□□ 0.28
LMO4-201ENST00000370542 NIPA1Q7RTP0 329 aa16.79■□□□□ 0.28
LMO4-201ENST00000370542 MYOCDQ8IZQ8 938 aa16.79■□□□□ 0.28
LMO4-201ENST00000370542 GDPD5Q8WTR4 605 aa16.79■□□□□ 0.28
LMO4-201ENST00000370542 SAMD11Q96NU1 681 aa16.79■□□□□ 0.28
LMO4-201ENST00000370542 FUCA2Q9BTY2 467 aa16.79■□□□□ 0.28
LMO4-201ENST00000370542 ANO3Q9BYT9 981 aa16.79■□□□□ 0.28
LMO4-201ENST00000370542 IFIH1Q9BYX4 1025 aaKnown RBP16.79■□□□□ 0.28
LMO4-201ENST00000370542 LIMCH1Q9UPQ0 1083 aa16.79■□□□□ 0.28
LMO4-201ENST00000370542 ESYT2A0FGR8 921 aa16.78■□□□□ 0.28
LMO4-201ENST00000370542 SMCO2A6NFE2 343 aa16.78■□□□□ 0.28
LMO4-201ENST00000370542 RRN3P2A6NIE6 340 aa16.78■□□□□ 0.28
LMO4-201ENST00000370542 STX6O43752 255 aa16.78■□□□□ 0.28
LMO4-201ENST00000370542 NEMFO60524 1076 aa16.78■□□□□ 0.28
LMO4-201ENST00000370542 CYP3A4P08684 503 aa16.78■□□□□ 0.28
LMO4-201ENST00000370542 ARP10275 920 aa16.78■□□□□ 0.28
LMO4-201ENST00000370542 ADD1P35611 737 aaKnown RBP16.78■□□□□ 0.28
LMO4-201ENST00000370542 ADCY7P51828 1080 aa16.78■□□□□ 0.28
LMO4-201ENST00000370542 ITGB3BPQ13352 177 aaPredicted RBP16.78■□□□□ 0.28
LMO4-201ENST00000370542 PFKFB3Q16875 520 aaPredicted RBP16.78■□□□□ 0.28
LMO4-201ENST00000370542 C17orf80Q9BSJ5 609 aa16.78■□□□□ 0.28
LMO4-201ENST00000370542 RC3H2Q9HBD1 1191 aaKnown RBP16.78■□□□□ 0.28
LMO4-201ENST00000370542 AGO4Q9HCK5 861 aaKnown RBP16.78■□□□□ 0.28
LMO4-201ENST00000370542 TUBE1Q9UJT0 475 aa16.78■□□□□ 0.28
LMO4-201ENST00000370542 SMC3Q9UQE7 1217 aa16.78■□□□□ 0.28
LMO4-201ENST00000370542 SQORQ9Y6N5 450 aa16.78■□□□□ 0.28
LMO4-201ENST00000370542 TTC3P53804 2025 aa16.78■□□□□ 0.28
LMO4-201ENST00000370542 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.77■□□□□ 0.28
LMO4-201ENST00000370542 GOLGA8AA7E2F4 631 aa16.77■□□□□ 0.28
LMO4-201ENST00000370542 GOLGA8BA8MQT2 603 aa16.77■□□□□ 0.28
LMO4-201ENST00000370542 F13A1P00488 732 aa16.77■□□□□ 0.28
LMO4-201ENST00000370542 LINC00271P0C7V0 271 aa16.77■□□□□ 0.28
LMO4-201ENST00000370542 INSRRP14616 1297 aa16.77■□□□□ 0.28
LMO4-201ENST00000370542 EVCP57679 992 aa16.77■□□□□ 0.28
LMO4-201ENST00000370542 ACTR2P61160 394 aa16.77■□□□□ 0.28
LMO4-201ENST00000370542 DHX8Q14562 1220 aaKnown RBP16.77■□□□□ 0.28
LMO4-201ENST00000370542 LPIN1Q14693 890 aa16.77■□□□□ 0.28
LMO4-201ENST00000370542 FBXO47Q5MNV8 452 aa16.77■□□□□ 0.28
LMO4-201ENST00000370542 FAM117BQ6P1L5 589 aa16.77■□□□□ 0.28
LMO4-201ENST00000370542 RSPH3Q86UC2 560 aa16.77■□□□□ 0.28
LMO4-201ENST00000370542 CRIPAKQ8N1N5 446 aa16.77■□□□□ 0.28
LMO4-201ENST00000370542 GLG1Q92896 1179 aa16.77■□□□□ 0.28
LMO4-201ENST00000370542 ZMYND12Q9H0C1 365 aa16.77■□□□□ 0.28
LMO4-201ENST00000370542 SNX14Q9Y5W7 946 aa16.77■□□□□ 0.28
LMO4-201ENST00000370542 IGLV3-22A0A075B6J6 115 aa16.76■□□□□ 0.27
LMO4-201ENST00000370542 CCDC196A0A1B0GTZ2 297 aa16.76■□□□□ 0.27
LMO4-201ENST00000370542 DHX15O43143 795 aaKnown RBP16.76■□□□□ 0.27
LMO4-201ENST00000370542 GADD45BO75293 160 aaPredicted RBP16.76■□□□□ 0.27
LMO4-201ENST00000370542 SLC26A2P50443 739 aa16.76■□□□□ 0.27
LMO4-201ENST00000370542 PLCB4Q15147 1175 aa16.76■□□□□ 0.27
LMO4-201ENST00000370542 PKN1Q16512 942 aa16.76■□□□□ 0.27
LMO4-201ENST00000370542 EPC2Q52LR7 807 aa16.76■□□□□ 0.27
LMO4-201ENST00000370542 FAM43BQ6ZT52 329 aaPredicted RBP16.76■□□□□ 0.27
LMO4-201ENST00000370542 FAM200AQ8TCP9 573 aa16.76■□□□□ 0.27
LMO4-201ENST00000370542 DNAJB3Q8WWF6 145 aa16.76■□□□□ 0.27
LMO4-201ENST00000370542 PGBD1Q96JS3 809 aa16.76■□□□□ 0.27
LMO4-201ENST00000370542 TTC12Q9H892 705 aaPredicted RBP16.76■□□□□ 0.27
LMO4-201ENST00000370542 PCDHA2Q9Y5H9 948 aa16.76■□□□□ 0.27
LMO4-201ENST00000370542 CCDC66A2RUB6 948 aa16.75■□□□□ 0.27
LMO4-201ENST00000370542 FAM86B1E9PN63 330 aa16.75■□□□□ 0.27
LMO4-201ENST00000370542 H3BNC9 293 aa16.75■□□□□ 0.27
LMO4-201ENST00000370542 ENPP3O14638 875 aa16.75■□□□□ 0.27
LMO4-201ENST00000370542 PRPF3O43395 683 aaKnown RBP16.75■□□□□ 0.27
LMO4-201ENST00000370542 DCXO43602 365 aa16.75■□□□□ 0.27
LMO4-201ENST00000370542 FAM86B2P0C5J1 330 aa16.75■□□□□ 0.27
LMO4-201ENST00000370542 SCG2P13521 617 aa16.75■□□□□ 0.27
LMO4-201ENST00000370542 CPA1P15085 419 aa16.75■□□□□ 0.27
LMO4-201ENST00000370542 MARK3P27448 753 aa16.75■□□□□ 0.27
LMO4-201ENST00000370542 METAP2P50579 478 aaKnown RBP eCLIP16.75■□□□□ 0.27
LMO4-201ENST00000370542 STAT5BP51692 787 aa16.75■□□□□ 0.27
LMO4-201ENST00000370542 CBX1P83916 185 aa16.75■□□□□ 0.27
LMO4-201ENST00000370542 NTRK3Q16288 839 aa16.75■□□□□ 0.27
LMO4-201ENST00000370542 LEXMQ3ZCV2 418 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms