RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 HERC4Q5GLZ8 1057 aaPredicted RBP10.97□□□□□ -0.65
PRPF38B-203ENST00000370025 MYOCDQ8IZQ8 938 aa10.97□□□□□ -0.65
PRPF38B-203ENST00000370025 FAM76AQ8TAV0 307 aa10.97□□□□□ -0.65
PRPF38B-203ENST00000370025 RPTORQ8N122 1335 aa10.96□□□□□ -0.65
PRPF38B-203ENST00000370025 EML1O00423 815 aa10.96□□□□□ -0.65
PRPF38B-203ENST00000370025 CHMP2AO43633 222 aa10.96□□□□□ -0.65
PRPF38B-203ENST00000370025 LRRC63Q05C16 580 aa10.96□□□□□ -0.65
PRPF38B-203ENST00000370025 NIPA1Q7RTP0 329 aa10.96□□□□□ -0.65
PRPF38B-203ENST00000370025 CAGE1Q8TC20 777 aa10.96□□□□□ -0.65
PRPF38B-203ENST00000370025 SYTL5Q8TDW5 730 aaPredicted RBP10.96□□□□□ -0.65
PRPF38B-203ENST00000370025 ZHX3Q9H4I2 956 aa10.96□□□□□ -0.65
PRPF38B-203ENST00000370025 GOLGA6L9A6NEM1 432 aa10.96□□□□□ -0.65
PRPF38B-203ENST00000370025 IPO5O00410 1097 aaKnown RBP10.96□□□□□ -0.65
PRPF38B-203ENST00000370025 NDUFAB1O14561 156 aa10.96□□□□□ -0.65
PRPF38B-203ENST00000370025 PPP1R12BO60237 982 aaPredicted RBP10.96□□□□□ -0.65
PRPF38B-203ENST00000370025 STX10O60499 249 aa10.96□□□□□ -0.65
PRPF38B-203ENST00000370025 KIAA0754O94854 1291 aa10.96□□□□□ -0.65
PRPF38B-203ENST00000370025 ARP10275 920 aa10.96□□□□□ -0.65
PRPF38B-203ENST00000370025 BCRP11274 1271 aa10.96□□□□□ -0.65
PRPF38B-203ENST00000370025 DSG3P32926 999 aa10.96□□□□□ -0.65
PRPF38B-203ENST00000370025 MTIF2P46199 727 aaKnown RBP10.96□□□□□ -0.65
PRPF38B-203ENST00000370025 NAP1L1P55209 391 aaKnown RBP10.96□□□□□ -0.65
PRPF38B-203ENST00000370025 BIRC2Q13490 618 aa10.96□□□□□ -0.65
PRPF38B-203ENST00000370025 TRIM14Q14142 442 aa10.96□□□□□ -0.65
PRPF38B-203ENST00000370025 NAIF1Q69YI7 327 aaPredicted RBP10.96□□□□□ -0.65
PRPF38B-203ENST00000370025 RNF207Q6ZRF8 634 aa10.96□□□□□ -0.65
PRPF38B-203ENST00000370025 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.96□□□□□ -0.65
PRPF38B-203ENST00000370025 RIT2Q99578 217 aa10.96□□□□□ -0.65
PRPF38B-203ENST00000370025 SEMA6BQ9H3T3 888 aa10.96□□□□□ -0.65
PRPF38B-203ENST00000370025 COL20A1Q9P218 1284 aa10.96□□□□□ -0.65
PRPF38B-203ENST00000370025 USP2O75604 605 aaPredicted RBP10.96□□□□□ -0.66
PRPF38B-203ENST00000370025 EYA4O95677 639 aa10.96□□□□□ -0.66
PRPF38B-203ENST00000370025 MUTP22033 750 aa10.96□□□□□ -0.66
PRPF38B-203ENST00000370025 OAZ1P54368 228 aa10.96□□□□□ -0.66
PRPF38B-203ENST00000370025 PSMC6P62333 389 aa10.96□□□□□ -0.66
PRPF38B-203ENST00000370025 RPS6P62753 249 aaKnown RBP10.96□□□□□ -0.66
PRPF38B-203ENST00000370025 RBL2Q08999 1139 aa10.96□□□□□ -0.66
PRPF38B-203ENST00000370025 PCNX4Q63HM2 1172 aa10.96□□□□□ -0.66
PRPF38B-203ENST00000370025 DPY19L2Q6NUT2 758 aa10.96□□□□□ -0.66
PRPF38B-203ENST00000370025 NSMFQ6X4W1 530 aa10.96□□□□□ -0.66
PRPF38B-203ENST00000370025 TPH2Q8IWU9 490 aa10.96□□□□□ -0.66
PRPF38B-203ENST00000370025 OTUD6BQ8N6M0 293 aa10.96□□□□□ -0.66
PRPF38B-203ENST00000370025 RBM46Q8TBY0 533 aaKnown RBP10.96□□□□□ -0.66
PRPF38B-203ENST00000370025 SCLT1Q96NL6 688 aa10.96□□□□□ -0.66
PRPF38B-203ENST00000370025 TUBGCP2Q9BSJ2 902 aa10.96□□□□□ -0.66
PRPF38B-203ENST00000370025 RGL1Q9NZL6 768 aa10.96□□□□□ -0.66
PRPF38B-203ENST00000370025 USP8P40818 1118 aa10.95□□□□□ -0.66
PRPF38B-203ENST00000370025 IRAK1P51617 712 aa10.95□□□□□ -0.66
PRPF38B-203ENST00000370025 GSCP56915 257 aaPredicted RBP10.95□□□□□ -0.66
PRPF38B-203ENST00000370025 PDCLQ13371 301 aa10.95□□□□□ -0.66
PRPF38B-203ENST00000370025 LRRC41Q15345 812 aa10.95□□□□□ -0.66
PRPF38B-203ENST00000370025 C9orf131Q5VYM1 1079 aa10.95□□□□□ -0.66
PRPF38B-203ENST00000370025 CNGA4Q8IV77 575 aa10.95□□□□□ -0.66
PRPF38B-203ENST00000370025 CNOT6LQ96LI5 555 aaKnown RBP10.95□□□□□ -0.66
PRPF38B-203ENST00000370025 PANX2Q96RD6 677 aa10.95□□□□□ -0.66
PRPF38B-203ENST00000370025 PSMB7Q99436 277 aa10.95□□□□□ -0.66
PRPF38B-203ENST00000370025 HSD17B14Q9BPX1 270 aa10.95□□□□□ -0.66
PRPF38B-203ENST00000370025 RNF146Q9NTX7 359 aa10.95□□□□□ -0.66
PRPF38B-203ENST00000370025 HOXC10Q9NYD6 342 aa10.95□□□□□ -0.66
PRPF38B-203ENST00000370025 AFG3L2Q9Y4W6 797 aa10.95□□□□□ -0.66
PRPF38B-203ENST00000370025 NPHP3-ACAD11A0A0J9YXS1 232 aa10.95□□□□□ -0.66
PRPF38B-203ENST00000370025 LGALS16A8MUM7 142 aa10.95□□□□□ -0.66
PRPF38B-203ENST00000370025 NF2P35240 595 aa10.95□□□□□ -0.66
PRPF38B-203ENST00000370025 PEX19P40855 299 aa10.95□□□□□ -0.66
PRPF38B-203ENST00000370025 DNM2P50570 870 aa10.95□□□□□ -0.66
PRPF38B-203ENST00000370025 CTTNQ14247 550 aaKnown RBP10.95□□□□□ -0.66
PRPF38B-203ENST00000370025 EPHA7Q15375 998 aa10.95□□□□□ -0.66
PRPF38B-203ENST00000370025 FOXR2Q6PJQ5 311 aa10.95□□□□□ -0.66
PRPF38B-203ENST00000370025 CATSPERGQ6ZRH7 1159 aa10.95□□□□□ -0.66
PRPF38B-203ENST00000370025 DYDC2Q96IM9 177 aa10.95□□□□□ -0.66
PRPF38B-203ENST00000370025 TAAR1Q96RJ0 339 aa10.95□□□□□ -0.66
PRPF38B-203ENST00000370025 BHMT2Q9H2M3 363 aa10.95□□□□□ -0.66
PRPF38B-203ENST00000370025 CSADQ9Y600 493 aa10.95□□□□□ -0.66
PRPF38B-203ENST00000370025 CACNB1Q02641 598 aaPredicted RBP10.95□□□□□ -0.66
PRPF38B-203ENST00000370025 KCTD19Q17RG1 926 aaPredicted RBP10.95□□□□□ -0.66
PRPF38B-203ENST00000370025 ARSHQ5FYA8 562 aa10.95□□□□□ -0.66
PRPF38B-203ENST00000370025 SWT1Q5T5J6 900 aaKnown RBP10.95□□□□□ -0.66
PRPF38B-203ENST00000370025 SNRNP48Q6IEG0 339 aaKnown RBP10.95□□□□□ -0.66
PRPF38B-203ENST00000370025 MB21D1Q8N884 522 aa10.95□□□□□ -0.66
PRPF38B-203ENST00000370025 CCDC51Q96ER9 411 aa10.95□□□□□ -0.66
PRPF38B-203ENST00000370025 TBC1D7Q9P0N9 293 aa10.95□□□□□ -0.66
PRPF38B-203ENST00000370025 SLITRK3O94933 977 aa10.94□□□□□ -0.66
PRPF38B-203ENST00000370025 ITGB5P18084 799 aa10.94□□□□□ -0.66
PRPF38B-203ENST00000370025 EIF2AK2P19525 551 aaKnown RBP10.94□□□□□ -0.66
PRPF38B-203ENST00000370025 GIT2Q14161 759 aa10.94□□□□□ -0.66
PRPF38B-203ENST00000370025 ARHGEF16Q5VV41 709 aa10.94□□□□□ -0.66
PRPF38B-203ENST00000370025 NACC1Q96RE7 527 aa10.94□□□□□ -0.66
PRPF38B-203ENST00000370025 RMDN3Q96TC7 470 aa10.94□□□□□ -0.66
PRPF38B-203ENST00000370025 NAA15Q9BXJ9 866 aaKnown RBP10.94□□□□□ -0.66
PRPF38B-203ENST00000370025 GBP3Q9H0R5 595 aa10.94□□□□□ -0.66
PRPF38B-203ENST00000370025 UNC45AQ9H3U1 944 aa10.94□□□□□ -0.66
PRPF38B-203ENST00000370025 KCNH7Q9NS40 1196 aa10.94□□□□□ -0.66
PRPF38B-203ENST00000370025 UBIAD1Q9Y5Z9 338 aa10.94□□□□□ -0.66
PRPF38B-203ENST00000370025 ADGRG1Q9Y653 693 aa10.94□□□□□ -0.66
PRPF38B-203ENST00000370025 SSC5DA1L4H1 1573 aa10.94□□□□□ -0.66
PRPF38B-203ENST00000370025 A0A1W2PQC6 194 aa10.94□□□□□ -0.66
PRPF38B-203ENST00000370025 TBCAO75347 108 aaKnown RBP10.94□□□□□ -0.66
PRPF38B-203ENST00000370025 MYBL2P10244 700 aa10.94□□□□□ -0.66
PRPF38B-203ENST00000370025 CASP14P31944 242 aa10.94□□□□□ -0.66
PRPF38B-203ENST00000370025 TKFCQ3LXA3 575 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms