RNA–Protein interactions for RNA: ENST00000369846.8

LCA5-201, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-201ENST00000369846 LRRC41Q15345 812 aa9.17□□□□□ -0.94
LCA5-201ENST00000369846 MAN2A1Q16706 1144 aa9.17□□□□□ -0.94
LCA5-201ENST00000369846 KRT25Q7Z3Z0 450 aa9.17□□□□□ -0.94
LCA5-201ENST00000369846 P2RX5Q93086 422 aa9.17□□□□□ -0.94
LCA5-201ENST00000369846 METTL14Q9HCE5 456 aaKnown RBP9.17□□□□□ -0.94
LCA5-201ENST00000369846 COL3A1P02461 1466 aaPredicted RBP9.17□□□□□ -0.94
LCA5-201ENST00000369846 IQANK1A0A1B0GTG1 560 aa9.17□□□□□ -0.94
LCA5-201ENST00000369846 CCDC195A0A1B0GUA6 201 aa9.17□□□□□ -0.94
LCA5-201ENST00000369846 CAPN9O14815 690 aa9.17□□□□□ -0.94
LCA5-201ENST00000369846 TEX33O43247 280 aa9.17□□□□□ -0.94
LCA5-201ENST00000369846 CCDC22O60826 627 aa9.17□□□□□ -0.94
LCA5-201ENST00000369846 GFPT2O94808 682 aa9.17□□□□□ -0.94
LCA5-201ENST00000369846 DLGAP3O95886 979 aa9.17□□□□□ -0.94
LCA5-201ENST00000369846 SNRPA1P09661 255 aaKnown RBP9.17□□□□□ -0.94
LCA5-201ENST00000369846 H2AFXP16104 143 aaPredicted RBP9.17□□□□□ -0.94
LCA5-201ENST00000369846 SCTRP47872 440 aa9.17□□□□□ -0.94
LCA5-201ENST00000369846 C16orf72Q14CZ0 275 aa9.17□□□□□ -0.94
LCA5-201ENST00000369846 RCN1Q15293 331 aa9.17□□□□□ -0.94
LCA5-201ENST00000369846 NSUN7Q8NE18 718 aaKnown RBP9.17□□□□□ -0.94
LCA5-201ENST00000369846 PARD3BQ8TEW8 1205 aa9.17□□□□□ -0.94
LCA5-201ENST00000369846 PGBD1Q96JS3 809 aa9.17□□□□□ -0.94
LCA5-201ENST00000369846 CACYBPQ9HB71 228 aaKnown RBP9.17□□□□□ -0.94
LCA5-201ENST00000369846 LRRC7Q96NW7 1537 aa9.17□□□□□ -0.94
LCA5-201ENST00000369846 POGZQ7Z3K3 1410 aa9.17□□□□□ -0.94
LCA5-201ENST00000369846 ABCC1P33527 1531 aa9.17□□□□□ -0.94
LCA5-201ENST00000369846 TARSL2A2RTX5 802 aaKnown RBP9.17□□□□□ -0.94
LCA5-201ENST00000369846 H3BQF6 201 aa9.17□□□□□ -0.94
LCA5-201ENST00000369846 PODXLO00592 558 aa9.17□□□□□ -0.94
LCA5-201ENST00000369846 RAPGEF3O95398 923 aa9.17□□□□□ -0.94
LCA5-201ENST00000369846 SLC4A1P02730 911 aa9.17□□□□□ -0.94
LCA5-201ENST00000369846 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.17□□□□□ -0.94
LCA5-201ENST00000369846 MARCH10Q8NA82 808 aaPredicted RBP9.17□□□□□ -0.94
LCA5-201ENST00000369846 FAM81BQ96LP2 452 aa9.17□□□□□ -0.94
LCA5-201ENST00000369846 ZIM3Q96PE6 472 aa9.17□□□□□ -0.94
LCA5-201ENST00000369846 VCPKMTQ9H867 229 aa9.17□□□□□ -0.94
LCA5-201ENST00000369846 TMOD3Q9NYL9 352 aa9.17□□□□□ -0.94
LCA5-201ENST00000369846 JAG2Q9Y219 1238 aa9.17□□□□□ -0.94
LCA5-201ENST00000369846 ZNF652Q9Y2D9 606 aa9.17□□□□□ -0.94
LCA5-201ENST00000369846 SSH2Q76I76 1423 aa9.16□□□□□ -0.94
LCA5-201ENST00000369846 LINC00854A0A1B0GVQ3 168 aa9.16□□□□□ -0.94
LCA5-201ENST00000369846 F8W031 263 aaPredicted RBP9.16□□□□□ -0.94
LCA5-201ENST00000369846 ARHGDIAP52565 204 aa9.16□□□□□ -0.94
LCA5-201ENST00000369846 CACNA2D1P54289 1103 aa9.16□□□□□ -0.94
LCA5-201ENST00000369846 WASHC5Q12768 1159 aa9.16□□□□□ -0.94
LCA5-201ENST00000369846 MORF4L2Q15014 288 aa9.16□□□□□ -0.94
LCA5-201ENST00000369846 FSCBQ5H9T9 825 aa9.16□□□□□ -0.94
LCA5-201ENST00000369846 LMBRD2Q68DH5 695 aaPredicted RBP9.16□□□□□ -0.94
LCA5-201ENST00000369846 KLC3Q6P597 504 aa9.16□□□□□ -0.94
LCA5-201ENST00000369846 TMED8Q6PL24 325 aaPredicted RBP9.16□□□□□ -0.94
LCA5-201ENST00000369846 CENPUQ71F23 418 aa9.16□□□□□ -0.94
LCA5-201ENST00000369846 APLFQ8IW19 511 aaPredicted RBP9.16□□□□□ -0.94
LCA5-201ENST00000369846 WDR60Q8WVS4 1066 aa9.16□□□□□ -0.94
LCA5-201ENST00000369846 ARL8AQ96BM9 186 aa9.16□□□□□ -0.94
LCA5-201ENST00000369846 AMACRQ9UHK6 382 aa9.16□□□□□ -0.94
LCA5-201ENST00000369846 PPP6R2O75170 966 aa9.16□□□□□ -0.94
LCA5-201ENST00000369846 KRT37O76014 449 aa9.16□□□□□ -0.94
LCA5-201ENST00000369846 MFN2O95140 757 aa9.16□□□□□ -0.94
LCA5-201ENST00000369846 GOLGA8HP0CJ92 632 aa9.16□□□□□ -0.94
LCA5-201ENST00000369846 ZC3H12BQ5HYM0 836 aaKnown RBP9.16□□□□□ -0.94
LCA5-201ENST00000369846 RNF207Q6ZRF8 634 aa9.16□□□□□ -0.94
LCA5-201ENST00000369846 TUBGCP3Q96CW5 907 aa9.16□□□□□ -0.94
LCA5-201ENST00000369846 ZFYVE16Q7Z3T8 1539 aa9.16□□□□□ -0.94
LCA5-201ENST00000369846 SASH1O94885 1247 aa9.16□□□□□ -0.94
LCA5-201ENST00000369846 CPA2P48052 419 aa9.16□□□□□ -0.94
LCA5-201ENST00000369846 ADARP55265 1226 aaKnown RBP9.16□□□□□ -0.94
LCA5-201ENST00000369846 DEFA1P59665 94 aa9.16□□□□□ -0.94
LCA5-201ENST00000369846 DEFA3P59666 94 aa9.16□□□□□ -0.94
LCA5-201ENST00000369846 RESTQ13127 1097 aa9.16□□□□□ -0.94
LCA5-201ENST00000369846 THOC5Q13769 683 aaKnown RBP9.16□□□□□ -0.94
LCA5-201ENST00000369846 TEDDM1Q5T9Z0 273 aa9.16□□□□□ -0.94
LCA5-201ENST00000369846 ZNF654Q8IZM8 581 aa9.16□□□□□ -0.94
LCA5-201ENST00000369846 KLHL23Q8NBE8 558 aa9.16□□□□□ -0.94
LCA5-201ENST00000369846 BEGAINQ9BUH8 593 aa9.16□□□□□ -0.94
LCA5-201ENST00000369846 LSG1Q9H089 658 aaKnown RBP9.16□□□□□ -0.94
LCA5-201ENST00000369846 AURKCQ9UQB9 309 aa9.16□□□□□ -0.94
LCA5-201ENST00000369846 MYOM2P54296 1465 aa9.16□□□□□ -0.94
LCA5-201ENST00000369846 B2RBV5 119 aa9.15□□□□□ -0.94
LCA5-201ENST00000369846 E7ENQ6 273 aa9.15□□□□□ -0.94
LCA5-201ENST00000369846 AP3B1O00203 1094 aa9.15□□□□□ -0.94
LCA5-201ENST00000369846 KRT19P08727 400 aa9.15□□□□□ -0.94
LCA5-201ENST00000369846 S100A5P33763 92 aa9.15□□□□□ -0.94
LCA5-201ENST00000369846 BLVRAP53004 296 aa9.15□□□□□ -0.94
LCA5-201ENST00000369846 ZNF211Q13398 564 aaPredicted RBP9.15□□□□□ -0.94
LCA5-201ENST00000369846 PLEKHA7Q6IQ23 1121 aa9.15□□□□□ -0.94
LCA5-201ENST00000369846 PLD3Q8IV08 490 aa9.15□□□□□ -0.94
LCA5-201ENST00000369846 MB21D1Q8N884 522 aa9.15□□□□□ -0.94
LCA5-201ENST00000369846 FAM81AQ8TBF8 368 aa9.15□□□□□ -0.94
LCA5-201ENST00000369846 MDM1Q8TC05 714 aa9.15□□□□□ -0.94
LCA5-201ENST00000369846 USP40Q9NVE5 1235 aa9.15□□□□□ -0.94
LCA5-201ENST00000369846 PKD2L2Q9NZM6 624 aa9.15□□□□□ -0.94
LCA5-201ENST00000369846 NDUFA13Q9P0J0 144 aa9.15□□□□□ -0.94
LCA5-201ENST00000369846 COPG1Q9Y678 874 aaKnown RBP9.15□□□□□ -0.94
LCA5-201ENST00000369846 IPO5O00410 1097 aaKnown RBP9.15□□□□□ -0.94
LCA5-201ENST00000369846 NQO1P15559 274 aaKnown RBP9.15□□□□□ -0.94
LCA5-201ENST00000369846 NR2F2P24468 414 aa9.15□□□□□ -0.94
LCA5-201ENST00000369846 EIF6P56537 245 aaKnown RBP9.15□□□□□ -0.94
LCA5-201ENST00000369846 RAB14P61106 215 aa9.15□□□□□ -0.94
LCA5-201ENST00000369846 SFR1Q86XK3 245 aa9.15□□□□□ -0.94
LCA5-201ENST00000369846 ATP6V1E2Q96A05 226 aa9.15□□□□□ -0.94
LCA5-201ENST00000369846 CFAP36Q96G28 342 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms