RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 TGFB3P10600 412 aa18.58■□□□□ 0.57
PHGDH-202ENST00000369409 NPEPPSP55786 919 aa18.58■□□□□ 0.57
PHGDH-202ENST00000369409 ARID5BQ14865 1188 aa18.58■□□□□ 0.57
PHGDH-202ENST00000369409 FAM114A1Q8IWE2 563 aa18.58■□□□□ 0.57
PHGDH-202ENST00000369409 DAW1Q8N136 415 aa18.58■□□□□ 0.57
PHGDH-202ENST00000369409 VPS16Q9H269 839 aa18.58■□□□□ 0.57
PHGDH-202ENST00000369409 ABT1Q9ULW3 272 aaKnown RBP18.58■□□□□ 0.57
PHGDH-202ENST00000369409 DOCK3Q8IZD9 2030 aa18.58■□□□□ 0.57
PHGDH-202ENST00000369409 MSNP26038 577 aaKnown RBP18.58■□□□□ 0.56
PHGDH-202ENST00000369409 GRB14Q14449 540 aa18.58■□□□□ 0.56
PHGDH-202ENST00000369409 FOXR2Q6PJQ5 311 aa18.58■□□□□ 0.56
PHGDH-202ENST00000369409 SMC1BQ8NDV3 1235 aa18.58■□□□□ 0.56
PHGDH-202ENST00000369409 KCTD10Q9H3F6 313 aa18.58■□□□□ 0.56
PHGDH-202ENST00000369409 ZCCHC17Q9NP64 241 aaKnown RBP18.58■□□□□ 0.56
PHGDH-202ENST00000369409 RTN4Q9NQC3 1192 aaKnown RBP18.58■□□□□ 0.56
PHGDH-202ENST00000369409 SEL1LQ9UBV2 794 aa18.58■□□□□ 0.56
PHGDH-202ENST00000369409 SEPT9Q9UHD8 586 aaPredicted RBP18.58■□□□□ 0.56
PHGDH-202ENST00000369409 DDX41Q9UJV9 622 aaKnown RBP18.58■□□□□ 0.56
PHGDH-202ENST00000369409 N4BP3O15049 544 aa18.57■□□□□ 0.56
PHGDH-202ENST00000369409 PRPF6O94906 941 aaKnown RBP18.57■□□□□ 0.56
PHGDH-202ENST00000369409 STBD1O95210 358 aa18.57■□□□□ 0.56
PHGDH-202ENST00000369409 ATG7O95352 703 aa18.57■□□□□ 0.56
PHGDH-202ENST00000369409 NMT1P30419 496 aaKnown RBP18.57■□□□□ 0.56
PHGDH-202ENST00000369409 MAPK4P31152 587 aa18.57■□□□□ 0.56
PHGDH-202ENST00000369409 LRMPQ12912 555 aa18.57■□□□□ 0.56
PHGDH-202ENST00000369409 ODR4Q5SWX8 454 aa18.57■□□□□ 0.56
PHGDH-202ENST00000369409 KCNV1Q6PIU1 500 aa18.57■□□□□ 0.56
PHGDH-202ENST00000369409 METTL7BQ6UX53 244 aa18.57■□□□□ 0.56
PHGDH-202ENST00000369409 LRRC55Q6ZSA7 311 aa18.57■□□□□ 0.56
PHGDH-202ENST00000369409 PLEKHH3Q7Z736 793 aa18.57■□□□□ 0.56
PHGDH-202ENST00000369409 FAM178BQ8IXR5 827 aa18.57■□□□□ 0.56
PHGDH-202ENST00000369409 CACTINQ8WUQ7 758 aaKnown RBP18.57■□□□□ 0.56
PHGDH-202ENST00000369409 ZNF302Q9NR11 478 aa18.57■□□□□ 0.56
PHGDH-202ENST00000369409 FAM155AB1AL88 458 aaPredicted RBP18.56■□□□□ 0.56
PHGDH-202ENST00000369409 ECM2O94769 699 aaPredicted RBP18.56■□□□□ 0.56
PHGDH-202ENST00000369409 GSDMDP57764 484 aa18.56■□□□□ 0.56
PHGDH-202ENST00000369409 BMT2Q1RMZ1 405 aa18.56■□□□□ 0.56
PHGDH-202ENST00000369409 OTUD6AQ7L8S5 288 aa18.56■□□□□ 0.56
PHGDH-202ENST00000369409 IFNL1Q8IU54 200 aa18.56■□□□□ 0.56
PHGDH-202ENST00000369409 FIZ1Q96SL8 496 aa18.56■□□□□ 0.56
PHGDH-202ENST00000369409 MLXIPQ9HAP2 919 aa18.56■□□□□ 0.56
PHGDH-202ENST00000369409 GSTTP1A0A1W2PQM5 241 aa18.56■□□□□ 0.56
PHGDH-202ENST00000369409 LRRC10BA6NIK2 292 aa18.56■□□□□ 0.56
PHGDH-202ENST00000369409 HOXD13P35453 343 aa18.56■□□□□ 0.56
PHGDH-202ENST00000369409 SPECC1LQ69YQ0 1117 aa18.56■□□□□ 0.56
PHGDH-202ENST00000369409 DPP9Q86TI2 863 aa18.56■□□□□ 0.56
PHGDH-202ENST00000369409 CEP170P1Q96L14 293 aa18.56■□□□□ 0.56
PHGDH-202ENST00000369409 PDGFCQ9NRA1 345 aa18.56■□□□□ 0.56
PHGDH-202ENST00000369409 ZMYM2Q9UBW7 1377 aa18.55■□□□□ 0.56
PHGDH-202ENST00000369409 EIF3DO15371 548 aaKnown RBP eCLIP18.55■□□□□ 0.56
PHGDH-202ENST00000369409 FGFR1OPO95684 399 aaKnown RBP18.55■□□□□ 0.56
PHGDH-202ENST00000369409 PRKCSHP14314 528 aaPredicted RBP18.55■□□□□ 0.56
PHGDH-202ENST00000369409 MTIF2P46199 727 aaKnown RBP18.55■□□□□ 0.56
PHGDH-202ENST00000369409 KNOP1Q1ED39 458 aaKnown RBP18.55■□□□□ 0.56
PHGDH-202ENST00000369409 ZC2HC1CQ53FD0 456 aaPredicted RBP18.55■□□□□ 0.56
PHGDH-202ENST00000369409 TIPINQ9BVW5 301 aa18.55■□□□□ 0.56
PHGDH-202ENST00000369409 GPRC5CQ9NQ84 441 aa18.55■□□□□ 0.56
PHGDH-202ENST00000369409 MAFBQ9Y5Q3 323 aaPredicted RBP18.55■□□□□ 0.56
PHGDH-202ENST00000369409 IGKV6D-21A0A0A0MT36 114 aa18.54■□□□□ 0.56
PHGDH-202ENST00000369409 PES1O00541 588 aaKnown RBP18.54■□□□□ 0.56
PHGDH-202ENST00000369409 TCF7P36402 384 aaPredicted RBP18.54■□□□□ 0.56
PHGDH-202ENST00000369409 PBX1P40424 430 aa18.54■□□□□ 0.56
PHGDH-202ENST00000369409 FKBP3Q00688 224 aaKnown RBP18.54■□□□□ 0.56
PHGDH-202ENST00000369409 KCNA1Q09470 495 aa18.54■□□□□ 0.56
PHGDH-202ENST00000369409 XKR3Q5GH77 459 aa18.54■□□□□ 0.56
PHGDH-202ENST00000369409 CELF3Q5SZQ8 465 aaKnown RBP18.54■□□□□ 0.56
PHGDH-202ENST00000369409 ARMCX5Q6P1M9 558 aa18.54■□□□□ 0.56
PHGDH-202ENST00000369409 CCDC62Q6P9F0 684 aa18.54■□□□□ 0.56
PHGDH-202ENST00000369409 PPP4R3CPQ6ZMV5 832 aa18.54■□□□□ 0.56
PHGDH-202ENST00000369409 ZNF467Q7Z7K2 595 aaPredicted RBP18.54■□□□□ 0.56
PHGDH-202ENST00000369409 LRRC8AQ8IWT6 810 aa18.54■□□□□ 0.56
PHGDH-202ENST00000369409 CCDC150Q8NCX0 1101 aa18.54■□□□□ 0.56
PHGDH-202ENST00000369409 ZNF507Q8TCN5 953 aa18.54■□□□□ 0.56
PHGDH-202ENST00000369409 SCFD2Q8WU76 684 aa18.54■□□□□ 0.56
PHGDH-202ENST00000369409 COPS5Q92905 334 aa18.54■□□□□ 0.56
PHGDH-202ENST00000369409 DRC1Q96MC2 740 aa18.54■□□□□ 0.56
PHGDH-202ENST00000369409 TUBGCP2Q9BSJ2 902 aa18.54■□□□□ 0.56
PHGDH-202ENST00000369409 LARSQ9P2J5 1176 aaKnown RBP18.54■□□□□ 0.56
PHGDH-202ENST00000369409 MGAMO43451 1857 aa18.54■□□□□ 0.56
PHGDH-202ENST00000369409 UBE4BO95155 1302 aa18.54■□□□□ 0.56
PHGDH-202ENST00000369409 LGALS16A8MUM7 142 aa18.54■□□□□ 0.56
PHGDH-202ENST00000369409 K7ENM7 598 aa18.54■□□□□ 0.56
PHGDH-202ENST00000369409 NKRFO15226 690 aaKnown RBP eCLIP18.54■□□□□ 0.56
PHGDH-202ENST00000369409 OATP04181 439 aa18.54■□□□□ 0.56
PHGDH-202ENST00000369409 TXNP10599 105 aaKnown RBP18.54■□□□□ 0.56
PHGDH-202ENST00000369409 ATP4AP20648 1035 aa18.54■□□□□ 0.56
PHGDH-202ENST00000369409 GRM1Q13255 1194 aa18.54■□□□□ 0.56
PHGDH-202ENST00000369409 TTLL4Q14679 1199 aa18.54■□□□□ 0.56
PHGDH-202ENST00000369409 MTERF2Q49AM1 385 aa18.54■□□□□ 0.56
PHGDH-202ENST00000369409 TMEM63BQ5T3F8 832 aa18.54■□□□□ 0.56
PHGDH-202ENST00000369409 FAM102BQ5T8I3 360 aa18.54■□□□□ 0.56
PHGDH-202ENST00000369409 SEPT1Q8WYJ6 367 aa18.54■□□□□ 0.56
PHGDH-202ENST00000369409 CCDC102AQ96A19 550 aa18.54■□□□□ 0.56
PHGDH-202ENST00000369409 PCYT2Q99447 389 aa18.54■□□□□ 0.56
PHGDH-202ENST00000369409 RRAGDQ9NQL2 400 aaPredicted RBP18.54■□□□□ 0.56
PHGDH-202ENST00000369409 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.54■□□□□ 0.56
PHGDH-202ENST00000369409 TMEM88BA6NKF7 163 aa18.53■□□□□ 0.56
PHGDH-202ENST00000369409 NOP56O00567 594 aaKnown RBP18.53■□□□□ 0.56
PHGDH-202ENST00000369409 INHBEP58166 350 aa18.53■□□□□ 0.56
PHGDH-202ENST00000369409 SREBF2Q12772 1141 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms