RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 SFR1Q86XK3 245 aa11.72□□□□□ -0.53
TPM3-212ENST00000368533 GPR161Q8N6U8 529 aaKnown RBP11.72□□□□□ -0.53
TPM3-212ENST00000368533 SLC10A4Q96EP9 437 aa11.72□□□□□ -0.53
TPM3-212ENST00000368533 NT5C3AQ9H0P0 336 aa11.72□□□□□ -0.53
TPM3-212ENST00000368533 HOXC10Q9NYD6 342 aa11.72□□□□□ -0.53
TPM3-212ENST00000368533 CYP39A1Q9NYL5 469 aa11.72□□□□□ -0.53
TPM3-212ENST00000368533 RNF225M0QZC1 329 aaPredicted RBP11.72□□□□□ -0.53
TPM3-212ENST00000368533 PRPF6O94906 941 aaKnown RBP11.72□□□□□ -0.53
TPM3-212ENST00000368533 RHOXF2BP0C7M4 288 aa11.72□□□□□ -0.53
TPM3-212ENST00000368533 KLK7P49862 253 aa11.72□□□□□ -0.53
TPM3-212ENST00000368533 SOX10P56693 466 aa11.72□□□□□ -0.53
TPM3-212ENST00000368533 FBXW10Q5XX13 1052 aa11.72□□□□□ -0.53
TPM3-212ENST00000368533 ERO1BQ86YB8 467 aa11.72□□□□□ -0.53
TPM3-212ENST00000368533 TMTC1Q8IUR5 882 aa11.72□□□□□ -0.53
TPM3-212ENST00000368533 PPM1EQ8WY54 764 aa11.72□□□□□ -0.53
TPM3-212ENST00000368533 KAT2BQ92831 832 aa11.72□□□□□ -0.53
TPM3-212ENST00000368533 L3MBTL3Q96JM7 780 aaPredicted RBP11.72□□□□□ -0.53
TPM3-212ENST00000368533 RHOXF2Q9BQY4 288 aa11.72□□□□□ -0.53
TPM3-212ENST00000368533 ACAD9Q9H845 621 aa11.72□□□□□ -0.53
TPM3-212ENST00000368533 KDM3AQ9Y4C1 1321 aa11.72□□□□□ -0.53
TPM3-212ENST00000368533 PHIPQ8WWQ0 1821 aa11.72□□□□□ -0.53
TPM3-212ENST00000368533 FAM170AA1A519 330 aa11.71□□□□□ -0.53
TPM3-212ENST00000368533 ABL1P00519 1130 aa11.71□□□□□ -0.53
TPM3-212ENST00000368533 IVLP07476 585 aa11.71□□□□□ -0.53
TPM3-212ENST00000368533 SLC12A3P55017 1021 aa11.71□□□□□ -0.53
TPM3-212ENST00000368533 CORO7P57737 925 aa11.71□□□□□ -0.53
TPM3-212ENST00000368533 FAM26FQ5R3K3 315 aa11.71□□□□□ -0.53
TPM3-212ENST00000368533 NOL9Q5SY16 702 aaKnown RBP11.71□□□□□ -0.53
TPM3-212ENST00000368533 CYP26C1Q6V0L0 522 aa11.71□□□□□ -0.53
TPM3-212ENST00000368533 UNC13DQ70J99 1090 aa11.71□□□□□ -0.53
TPM3-212ENST00000368533 IRF2BP1Q8IU81 584 aa11.71□□□□□ -0.53
TPM3-212ENST00000368533 CCDC155Q8N6L0 562 aa11.71□□□□□ -0.53
TPM3-212ENST00000368533 SLC5A5Q92911 643 aa11.71□□□□□ -0.53
TPM3-212ENST00000368533 DUSP9Q99956 384 aaKnown RBP11.71□□□□□ -0.53
TPM3-212ENST00000368533 CUEDC2Q9H467 287 aa11.71□□□□□ -0.53
TPM3-212ENST00000368533 ABHD10Q9NUJ1 306 aa11.71□□□□□ -0.53
TPM3-212ENST00000368533 DOCK5Q9H7D0 1870 aa11.71□□□□□ -0.53
TPM3-212ENST00000368533 B4DLN1 442 aa11.71□□□□□ -0.53
TPM3-212ENST00000368533 CELF2O95319 508 aaKnown RBP11.71□□□□□ -0.53
TPM3-212ENST00000368533 MYBP10242 640 aa11.71□□□□□ -0.53
TPM3-212ENST00000368533 MAP2K2P36507 400 aa11.71□□□□□ -0.53
TPM3-212ENST00000368533 NPEPPSP55786 919 aa11.71□□□□□ -0.53
TPM3-212ENST00000368533 HERVK_113P62684 666 aa11.71□□□□□ -0.53
TPM3-212ENST00000368533 ZC2HC1CQ53FD0 456 aaPredicted RBP11.71□□□□□ -0.53
TPM3-212ENST00000368533 MCTP2Q6DN12 878 aa11.71□□□□□ -0.53
TPM3-212ENST00000368533 CNNM4Q6P4Q7 775 aa11.71□□□□□ -0.53
TPM3-212ENST00000368533 MOXD1Q6UVY6 613 aa11.71□□□□□ -0.53
TPM3-212ENST00000368533 P2RX5Q93086 422 aa11.71□□□□□ -0.53
TPM3-212ENST00000368533 CHP1Q99653 195 aa11.71□□□□□ -0.53
TPM3-212ENST00000368533 LUC7L2Q9Y383 392 aaKnown RBP11.71□□□□□ -0.53
TPM3-212ENST00000368533 OTOFQ9HC10 1997 aa11.71□□□□□ -0.54
TPM3-212ENST00000368533 ASTN1O14525 1302 aa11.71□□□□□ -0.54
TPM3-212ENST00000368533 IQCA1LA6NCM1 817 aa11.71□□□□□ -0.54
TPM3-212ENST00000368533 NMT1P30419 496 aaKnown RBP11.71□□□□□ -0.54
TPM3-212ENST00000368533 ARMC9Q7Z3E5 817 aa11.71□□□□□ -0.54
TPM3-212ENST00000368533 CCDC91Q7Z6B0 441 aa11.71□□□□□ -0.54
TPM3-212ENST00000368533 C12orf42Q96LP6 360 aa11.71□□□□□ -0.54
TPM3-212ENST00000368533 AGO4Q9HCK5 861 aaKnown RBP11.71□□□□□ -0.54
TPM3-212ENST00000368533 LIMA1Q9UHB6 759 aaKnown RBP11.71□□□□□ -0.54
TPM3-212ENST00000368533 GRIN3BO60391 1043 aa11.7□□□□□ -0.54
TPM3-212ENST00000368533 USO1O60763 962 aaKnown RBP11.7□□□□□ -0.54
TPM3-212ENST00000368533 RGS20O76081 388 aa11.7□□□□□ -0.54
TPM3-212ENST00000368533 CCNE2O96020 404 aa11.7□□□□□ -0.54
TPM3-212ENST00000368533 TRIM21P19474 475 aaKnown RBP11.7□□□□□ -0.54
TPM3-212ENST00000368533 PBX1P40424 430 aa11.7□□□□□ -0.54
TPM3-212ENST00000368533 MTIF2P46199 727 aaKnown RBP11.7□□□□□ -0.54
TPM3-212ENST00000368533 ERVK-24P63145 666 aa11.7□□□□□ -0.54
TPM3-212ENST00000368533 KCNB1Q14721 858 aa11.7□□□□□ -0.54
TPM3-212ENST00000368533 TTI2Q6NXR4 508 aa11.7□□□□□ -0.54
TPM3-212ENST00000368533 SMCR8Q8TEV9 937 aaPredicted RBP11.7□□□□□ -0.54
TPM3-212ENST00000368533 CCDC51Q96ER9 411 aa11.7□□□□□ -0.54
TPM3-212ENST00000368533 GPRC5CQ9NQ84 441 aa11.7□□□□□ -0.54
TPM3-212ENST00000368533 TBX3O15119 743 aa11.7□□□□□ -0.54
TPM3-212ENST00000368533 CLIC2O15247 247 aa11.7□□□□□ -0.54
TPM3-212ENST00000368533 GIT2Q14161 759 aa11.7□□□□□ -0.54
TPM3-212ENST00000368533 TMEM63BQ5T3F8 832 aa11.7□□□□□ -0.54
TPM3-212ENST00000368533 PCNX4Q63HM2 1172 aa11.7□□□□□ -0.54
TPM3-212ENST00000368533 MYCT1Q8N699 235 aa11.7□□□□□ -0.54
TPM3-212ENST00000368533 RBM46Q8TBY0 533 aaKnown RBP11.7□□□□□ -0.54
TPM3-212ENST00000368533 RABGGTAQ92696 567 aa11.7□□□□□ -0.54
TPM3-212ENST00000368533 HSD17B14Q9BPX1 270 aa11.7□□□□□ -0.54
TPM3-212ENST00000368533 MOV10L1Q9BXT6 1211 aaKnown RBP11.7□□□□□ -0.54
TPM3-212ENST00000368533 SPATC1LQ9H0A9 340 aa11.7□□□□□ -0.54
TPM3-212ENST00000368533 GINM1Q9NU53 330 aa11.7□□□□□ -0.54
TPM3-212ENST00000368533 CDC23Q9UJX2 597 aa11.7□□□□□ -0.54
TPM3-212ENST00000368533 RLFQ13129 1914 aa11.7□□□□□ -0.54
TPM3-212ENST00000368533 TTC26A0AVF1 554 aa11.69□□□□□ -0.54
TPM3-212ENST00000368533 SPDYE5A6NIY4 337 aa11.69□□□□□ -0.54
TPM3-212ENST00000368533 DHX15O43143 795 aaKnown RBP11.69□□□□□ -0.54
TPM3-212ENST00000368533 GCNT3O95395 438 aa11.69□□□□□ -0.54
TPM3-212ENST00000368533 MMS22LQ6ZRQ5 1243 aa11.69□□□□□ -0.54
TPM3-212ENST00000368533 SRGAP1Q7Z6B7 1085 aa11.69□□□□□ -0.54
TPM3-212ENST00000368533 KIAA1328Q86T90 577 aa11.69□□□□□ -0.54
TPM3-212ENST00000368533 ANKRD13CQ8N6S4 541 aa11.69□□□□□ -0.54
TPM3-212ENST00000368533 CNOT6LQ96LI5 555 aaKnown RBP11.69□□□□□ -0.54
TPM3-212ENST00000368533 CCDC43Q96MW1 224 aaKnown RBP11.69□□□□□ -0.54
TPM3-212ENST00000368533 PNKPQ96T60 521 aa11.69□□□□□ -0.54
TPM3-212ENST00000368533 JADE2Q9NQC1 790 aa11.69□□□□□ -0.54
TPM3-212ENST00000368533 PSD3Q9NYI0 1048 aa11.69□□□□□ -0.54
TPM3-212ENST00000368533 TFR2Q9UP52 801 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms