RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 PROB1E7EW31 1015 aa7.49□□□□□ -1.21
ECHDC1-202ENST00000368289 B3GALT4O96024 378 aa7.49□□□□□ -1.21
ECHDC1-202ENST00000368289 CLTBP09497 229 aa7.49□□□□□ -1.21
ECHDC1-202ENST00000368289 CASTP20810 708 aaKnown RBP7.49□□□□□ -1.21
ECHDC1-202ENST00000368289 SYT1P21579 422 aa7.49□□□□□ -1.21
ECHDC1-202ENST00000368289 CD68P34810 354 aaPredicted RBP7.49□□□□□ -1.21
ECHDC1-202ENST00000368289 TNNI2P48788 182 aa7.49□□□□□ -1.21
ECHDC1-202ENST00000368289 AK2P54819 239 aa7.49□□□□□ -1.21
ECHDC1-202ENST00000368289 CTSWP56202 376 aa7.49□□□□□ -1.21
ECHDC1-202ENST00000368289 CHRNDQ07001 517 aa7.49□□□□□ -1.21
ECHDC1-202ENST00000368289 NFIAQ12857 509 aa7.49□□□□□ -1.21
ECHDC1-202ENST00000368289 TXNDC11Q6PKC3 985 aa7.49□□□□□ -1.21
ECHDC1-202ENST00000368289 IGF2-ASQ6U949 168 aa7.49□□□□□ -1.21
ECHDC1-202ENST00000368289 CWC27Q6UX04 472 aaKnown RBP7.49□□□□□ -1.21
ECHDC1-202ENST00000368289 C3orf58Q8NDZ4 430 aa7.49□□□□□ -1.21
ECHDC1-202ENST00000368289 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.49□□□□□ -1.21
ECHDC1-202ENST00000368289 CRELD1Q96HD1 420 aa7.49□□□□□ -1.21
ECHDC1-202ENST00000368289 NAP1L5Q96NT1 182 aaPredicted RBP7.49□□□□□ -1.21
ECHDC1-202ENST00000368289 LLPHQ9BRT6 129 aaKnown RBP7.49□□□□□ -1.21
ECHDC1-202ENST00000368289 RNF19AQ9NV58 838 aa7.49□□□□□ -1.21
ECHDC1-202ENST00000368289 TMEM39AQ9NV64 488 aa7.49□□□□□ -1.21
ECHDC1-202ENST00000368289 SAMM50Q9Y512 469 aa7.49□□□□□ -1.21
ECHDC1-202ENST00000368289 PHIPQ8WWQ0 1821 aa7.49□□□□□ -1.21
ECHDC1-202ENST00000368289 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.48□□□□□ -1.21
ECHDC1-202ENST00000368289 SYCE3A1L190 88 aa7.48□□□□□ -1.21
ECHDC1-202ENST00000368289 TRIM75PA6NK02 468 aa7.48□□□□□ -1.21
ECHDC1-202ENST00000368289 RAG1P15918 1043 aa7.48□□□□□ -1.21
ECHDC1-202ENST00000368289 CDK11BP21127 795 aaKnown RBP7.48□□□□□ -1.21
ECHDC1-202ENST00000368289 VAMP1P23763 118 aa7.48□□□□□ -1.21
ECHDC1-202ENST00000368289 KRT85P78386 507 aa7.48□□□□□ -1.21
ECHDC1-202ENST00000368289 HMGN5P82970 282 aaKnown RBP7.48□□□□□ -1.21
ECHDC1-202ENST00000368289 MRPL58Q14197 206 aaKnown RBP7.48□□□□□ -1.21
ECHDC1-202ENST00000368289 GCKRQ14397 625 aa7.48□□□□□ -1.21
ECHDC1-202ENST00000368289 ZNF423Q2M1K9 1284 aa7.48□□□□□ -1.21
ECHDC1-202ENST00000368289 MFSD14BQ5SR56 506 aa7.48□□□□□ -1.21
ECHDC1-202ENST00000368289 HP1BP3Q5SSJ5 553 aaPredicted RBP7.48□□□□□ -1.21
ECHDC1-202ENST00000368289 FKBP1CQ5VVH2 108 aa7.48□□□□□ -1.21
ECHDC1-202ENST00000368289 DCAF15Q66K64 600 aa7.48□□□□□ -1.21
ECHDC1-202ENST00000368289 BLOC1S2Q6QNY1 142 aa7.48□□□□□ -1.21
ECHDC1-202ENST00000368289 AACSQ86V21 672 aa7.48□□□□□ -1.21
ECHDC1-202ENST00000368289 FBXL16Q8N461 479 aa7.48□□□□□ -1.21
ECHDC1-202ENST00000368289 RMDN1Q96DB5 314 aa7.48□□□□□ -1.21
ECHDC1-202ENST00000368289 CDC5LQ99459 802 aaKnown RBP7.48□□□□□ -1.21
ECHDC1-202ENST00000368289 UPF3BQ9BZI7 483 aaKnown RBP7.48□□□□□ -1.21
ECHDC1-202ENST00000368289 ASCC2Q9H1I8 757 aaPredicted RBP7.48□□□□□ -1.21
ECHDC1-202ENST00000368289 ZSCAN16Q9H4T2 348 aaPredicted RBP7.48□□□□□ -1.21
ECHDC1-202ENST00000368289 CERS4Q9HA82 394 aa7.48□□□□□ -1.21
ECHDC1-202ENST00000368289 SLC28A3Q9HAS3 691 aa7.48□□□□□ -1.21
ECHDC1-202ENST00000368289 TBX21Q9UL17 535 aa7.48□□□□□ -1.21
ECHDC1-202ENST00000368289 PRR23AA6NEV1 266 aa7.47□□□□□ -1.21
ECHDC1-202ENST00000368289 C9orf172C9J069 976 aa7.47□□□□□ -1.21
ECHDC1-202ENST00000368289 DEAF1O75398 565 aaPredicted RBP7.47□□□□□ -1.21
ECHDC1-202ENST00000368289 TIMP1P01033 207 aa7.47□□□□□ -1.21
ECHDC1-202ENST00000368289 CYP11A1P05108 521 aa7.47□□□□□ -1.21
ECHDC1-202ENST00000368289 CCDC192P0DO97 292 aa7.47□□□□□ -1.21
ECHDC1-202ENST00000368289 CYBAP13498 195 aa7.47□□□□□ -1.21
ECHDC1-202ENST00000368289 CSF2RAP15509 400 aa7.47□□□□□ -1.21
ECHDC1-202ENST00000368289 CYP2C19P33261 490 aa7.47□□□□□ -1.21
ECHDC1-202ENST00000368289 KCNJ4P48050 445 aa7.47□□□□□ -1.21
ECHDC1-202ENST00000368289 ST13P50502 369 aaKnown RBP7.47□□□□□ -1.21
ECHDC1-202ENST00000368289 NRG1Q02297 640 aaPredicted RBP7.47□□□□□ -1.21
ECHDC1-202ENST00000368289 GSTM4Q03013 218 aa7.47□□□□□ -1.21
ECHDC1-202ENST00000368289 KCNMA1Q12791 1236 aa7.47□□□□□ -1.21
ECHDC1-202ENST00000368289 AP3B2Q13367 1082 aa7.47□□□□□ -1.21
ECHDC1-202ENST00000368289 DHX8Q14562 1220 aaKnown RBP7.47□□□□□ -1.21
ECHDC1-202ENST00000368289 LRRC41Q15345 812 aa7.47□□□□□ -1.21
ECHDC1-202ENST00000368289 RAB30Q15771 203 aa7.47□□□□□ -1.21
ECHDC1-202ENST00000368289 CREB3L3Q68CJ9 461 aa7.47□□□□□ -1.21
ECHDC1-202ENST00000368289 SV2BQ7L1I2 683 aa7.47□□□□□ -1.21
ECHDC1-202ENST00000368289 SCYL3Q8IZE3 742 aa7.47□□□□□ -1.21
ECHDC1-202ENST00000368289 TDRD7Q8NHU6 1098 aaKnown RBP7.47□□□□□ -1.21
ECHDC1-202ENST00000368289 MRRFQ96E11 262 aaKnown RBP7.47□□□□□ -1.21
ECHDC1-202ENST00000368289 KLHDC7BQ96G42 594 aa7.47□□□□□ -1.21
ECHDC1-202ENST00000368289 MFSD14AQ96MC6 490 aa7.47□□□□□ -1.21
ECHDC1-202ENST00000368289 JAKMIP1Q96N16 626 aaKnown RBP7.47□□□□□ -1.21
ECHDC1-202ENST00000368289 MRPL18Q9H0U6 180 aaKnown RBP7.47□□□□□ -1.21
ECHDC1-202ENST00000368289 PDCL3Q9H2J4 239 aa7.47□□□□□ -1.21
ECHDC1-202ENST00000368289 RBPJLQ9UBG7 517 aa7.47□□□□□ -1.21
ECHDC1-202ENST00000368289 MSRAQ9UJ68 235 aa7.47□□□□□ -1.21
ECHDC1-202ENST00000368289 CFAP45Q9UL16 551 aa7.47□□□□□ -1.21
ECHDC1-202ENST00000368289 RBM8AQ9Y5S9 174 aaKnown RBP7.47□□□□□ -1.21
ECHDC1-202ENST00000368289 OTOGLQ3ZCN5 2332 aa7.46□□□□□ -1.21
ECHDC1-202ENST00000368289 FAM229AH3BQW9 127 aa7.46□□□□□ -1.22
ECHDC1-202ENST00000368289 CTAGE5O15320 804 aa7.46□□□□□ -1.22
ECHDC1-202ENST00000368289 PQBP1O60828 265 aaKnown RBP7.46□□□□□ -1.22
ECHDC1-202ENST00000368289 CIAO1O76071 339 aa7.46□□□□□ -1.22
ECHDC1-202ENST00000368289 RPS6KB1P23443 525 aa7.46□□□□□ -1.22
ECHDC1-202ENST00000368289 GJB2P29033 226 aa7.46□□□□□ -1.22
ECHDC1-202ENST00000368289 GCLCP48506 637 aaPredicted RBP7.46□□□□□ -1.22
ECHDC1-202ENST00000368289 TSHZ3Q63HK5 1081 aa7.46□□□□□ -1.22
ECHDC1-202ENST00000368289 LARP1BQ659C4 914 aaKnown RBP7.46□□□□□ -1.22
ECHDC1-202ENST00000368289 MFSD5Q6N075 450 aa7.46□□□□□ -1.22
ECHDC1-202ENST00000368289 SLC44A5Q8NCS7 719 aa7.46□□□□□ -1.22
ECHDC1-202ENST00000368289 NPLOC4Q8TAT6 608 aa7.46□□□□□ -1.22
ECHDC1-202ENST00000368289 FAM151AQ8WW52 585 aa7.46□□□□□ -1.22
ECHDC1-202ENST00000368289 SOCS4Q8WXH5 440 aa7.46□□□□□ -1.22
ECHDC1-202ENST00000368289 EAF2Q96CJ1 260 aaPredicted RBP7.46□□□□□ -1.22
ECHDC1-202ENST00000368289 SUCLG2Q96I99 432 aa7.46□□□□□ -1.22
ECHDC1-202ENST00000368289 ZDHHC15Q96MV8 337 aa7.46□□□□□ -1.22
ECHDC1-202ENST00000368289 FSD1Q9BTV5 496 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms