RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 APPP05067 770 aa5.1□□□□□ -1.59
ECHDC1-201ENST00000368287 TOP3AQ13472 1001 aaPredicted RBP5.1□□□□□ -1.59
ECHDC1-201ENST00000368287 TESK1Q15569 626 aa5.1□□□□□ -1.59
ECHDC1-201ENST00000368287 PRSS53Q2L4Q9 553 aa5.1□□□□□ -1.59
ECHDC1-201ENST00000368287 C2orf27AQ580R0 203 aa5.1□□□□□ -1.59
ECHDC1-201ENST00000368287 SLC35F1Q5T1Q4 408 aa5.1□□□□□ -1.59
ECHDC1-201ENST00000368287 CD276Q5ZPR3 534 aa5.1□□□□□ -1.59
ECHDC1-201ENST00000368287 USP53Q70EK8 1073 aa5.1□□□□□ -1.59
ECHDC1-201ENST00000368287 GLCCI1Q86VQ1 547 aa5.1□□□□□ -1.59
ECHDC1-201ENST00000368287 TMPRSS6Q8IU80 811 aa5.1□□□□□ -1.59
ECHDC1-201ENST00000368287 KREMEN2Q8NCW0 462 aa5.1□□□□□ -1.59
ECHDC1-201ENST00000368287 ZSWIM2Q8NEG5 633 aa5.1□□□□□ -1.59
ECHDC1-201ENST00000368287 PIP4K2CQ8TBX8 421 aa5.1□□□□□ -1.59
ECHDC1-201ENST00000368287 DCAF4Q8WV16 495 aa5.1□□□□□ -1.59
ECHDC1-201ENST00000368287 SCYL1Q96KG9 808 aa5.1□□□□□ -1.59
ECHDC1-201ENST00000368287 DHRS4Q9BTZ2 278 aa5.1□□□□□ -1.59
ECHDC1-201ENST00000368287 PLA2G3Q9NZ20 509 aa5.1□□□□□ -1.59
ECHDC1-201ENST00000368287 PTGFRNQ9P2B2 879 aa5.1□□□□□ -1.59
ECHDC1-201ENST00000368287 ZNF839A8K0R7 811 aa5.09□□□□□ -1.59
ECHDC1-201ENST00000368287 NUDT3O95989 172 aa5.09□□□□□ -1.59
ECHDC1-201ENST00000368287 PEX11BO96011 259 aa5.09□□□□□ -1.59
ECHDC1-201ENST00000368287 ADRA1BP35368 520 aa5.09□□□□□ -1.59
ECHDC1-201ENST00000368287 KRTAP10-9P60411 292 aa5.09□□□□□ -1.59
ECHDC1-201ENST00000368287 KRTAP10-11P60412 298 aa5.09□□□□□ -1.59
ECHDC1-201ENST00000368287 SUMO1P63165 101 aaKnown RBP5.09□□□□□ -1.59
ECHDC1-201ENST00000368287 FAM209AQ5JX71 171 aa5.09□□□□□ -1.59
ECHDC1-201ENST00000368287 ZKSCAN2Q63HK3 967 aa5.09□□□□□ -1.59
ECHDC1-201ENST00000368287 RPUSD2Q8IZ73 545 aaKnown RBP5.09□□□□□ -1.59
ECHDC1-201ENST00000368287 OSBP2Q969R2 916 aa5.09□□□□□ -1.59
ECHDC1-201ENST00000368287 EXOC2Q96KP1 924 aa5.09□□□□□ -1.59
ECHDC1-201ENST00000368287 MSL2Q9HCI7 577 aa5.09□□□□□ -1.59
ECHDC1-201ENST00000368287 FANCLQ9NW38 375 aa5.09□□□□□ -1.59
ECHDC1-201ENST00000368287 ARHGAP6O43182 974 aa5.08□□□□□ -1.6
ECHDC1-201ENST00000368287 CRHR2Q13324 411 aa5.08□□□□□ -1.6
ECHDC1-201ENST00000368287 TUSC3Q13454 348 aa5.08□□□□□ -1.6
ECHDC1-201ENST00000368287 NFYCQ13952 458 aa5.08□□□□□ -1.6
ECHDC1-201ENST00000368287 TKFCQ3LXA3 575 aa5.08□□□□□ -1.6
ECHDC1-201ENST00000368287 EGFLAMQ63HQ2 1017 aa5.08□□□□□ -1.6
ECHDC1-201ENST00000368287 RSPO2Q6UXX9 243 aaPredicted RBP5.08□□□□□ -1.6
ECHDC1-201ENST00000368287 RBM12BQ8IXT5 1001 aaKnown RBP5.08□□□□□ -1.6
ECHDC1-201ENST00000368287 THEMISQ8N1K5 641 aaPredicted RBP5.08□□□□□ -1.6
ECHDC1-201ENST00000368287 ZFYVE21Q9BQ24 234 aa5.08□□□□□ -1.6
ECHDC1-201ENST00000368287 GPR27Q9NS67 375 aa5.08□□□□□ -1.6
ECHDC1-201ENST00000368287 TMEM260Q9NX78 707 aa5.08□□□□□ -1.6
ECHDC1-201ENST00000368287 CAPN14A8MX76 684 aa5.07□□□□□ -1.6
ECHDC1-201ENST00000368287 MASP2O00187 686 aa5.07□□□□□ -1.6
ECHDC1-201ENST00000368287 ENPP3O14638 875 aa5.07□□□□□ -1.6
ECHDC1-201ENST00000368287 CYP27B1O15528 508 aa5.07□□□□□ -1.6
ECHDC1-201ENST00000368287 DENND5AQ6IQ26 1287 aa5.07□□□□□ -1.6
ECHDC1-201ENST00000368287 ZNF764Q96H86 408 aaPredicted RBP5.07□□□□□ -1.6
ECHDC1-201ENST00000368287 C1orf159Q96HA4 380 aa5.07□□□□□ -1.6
ECHDC1-201ENST00000368287 PHF20Q9BVI0 1012 aa5.07□□□□□ -1.6
ECHDC1-201ENST00000368287 JAM3Q9BX67 310 aa5.07□□□□□ -1.6
ECHDC1-201ENST00000368287 MRPS23Q9Y3D9 190 aaKnown RBP5.07□□□□□ -1.6
ECHDC1-201ENST00000368287 NUB1Q9Y5A7 615 aa5.07□□□□□ -1.6
ECHDC1-201ENST00000368287 NPFFR2Q9Y5X5 522 aa5.07□□□□□ -1.6
ECHDC1-201ENST00000368287 KRTAP23-1A1A580 65 aa5.06□□□□□ -1.6
ECHDC1-201ENST00000368287 BLACEA4D250 179 aa5.06□□□□□ -1.6
ECHDC1-201ENST00000368287 AQP7O14520 342 aa5.06□□□□□ -1.6
ECHDC1-201ENST00000368287 PPP1R12AO14974 1030 aaPredicted RBP5.06□□□□□ -1.6
ECHDC1-201ENST00000368287 LTFP02788 710 aa5.06□□□□□ -1.6
ECHDC1-201ENST00000368287 ERBB2P04626 1255 aa5.06□□□□□ -1.6
ECHDC1-201ENST00000368287 NAT1P18440 290 aa5.06□□□□□ -1.6
ECHDC1-201ENST00000368287 ETV4P43268 484 aa5.06□□□□□ -1.6
ECHDC1-201ENST00000368287 GABREP78334 506 aa5.06□□□□□ -1.6
ECHDC1-201ENST00000368287 GRM7Q14831 915 aa5.06□□□□□ -1.6
ECHDC1-201ENST00000368287 TBR1Q16650 682 aa5.06□□□□□ -1.6
ECHDC1-201ENST00000368287 C21orf62-AS1Q17RA5 79 aa5.06□□□□□ -1.6
ECHDC1-201ENST00000368287 DPP8Q6V1X1 898 aaPredicted RBP5.06□□□□□ -1.6
ECHDC1-201ENST00000368287 BHLHA9Q7RTU4 235 aa5.06□□□□□ -1.6
ECHDC1-201ENST00000368287 MAMDC2Q7Z304 686 aaPredicted RBP5.06□□□□□ -1.6
ECHDC1-201ENST00000368287 ADGRE4PQ86SQ3 457 aa5.06□□□□□ -1.6
ECHDC1-201ENST00000368287 IFNL3Q8IZI9 196 aa5.06□□□□□ -1.6
ECHDC1-201ENST00000368287 D2HGDHQ8N465 521 aa5.06□□□□□ -1.6
ECHDC1-201ENST00000368287 PTPRN2Q92932 1015 aa5.06□□□□□ -1.6
ECHDC1-201ENST00000368287 CDIP1Q9H305 208 aa5.06□□□□□ -1.6
ECHDC1-201ENST00000368287 SBNO2Q9Y2G9 1366 aa5.05□□□□□ -1.6
ECHDC1-201ENST00000368287 CDC45O75419 566 aa5.05□□□□□ -1.6
ECHDC1-201ENST00000368287 ASMTLO95671 621 aa5.05□□□□□ -1.6
ECHDC1-201ENST00000368287 GPR85P60893 370 aa5.05□□□□□ -1.6
ECHDC1-201ENST00000368287 STYK1Q6J9G0 422 aa5.05□□□□□ -1.6
ECHDC1-201ENST00000368287 CFHR4Q92496 578 aa5.05□□□□□ -1.6
ECHDC1-201ENST00000368287 ALG1Q9BT22 464 aa5.05□□□□□ -1.6
ECHDC1-201ENST00000368287 NELFAQ9H3P2 528 aa5.05□□□□□ -1.6
ECHDC1-201ENST00000368287 ADARB2Q9NS39 739 aaKnown RBP5.05□□□□□ -1.6
ECHDC1-201ENST00000368287 EFCAB14O75071 495 aa5.04□□□□□ -1.6
ECHDC1-201ENST00000368287 RPS6KA4O75676 772 aa5.04□□□□□ -1.6
ECHDC1-201ENST00000368287 RHOBTB3O94955 611 aa5.04□□□□□ -1.6
ECHDC1-201ENST00000368287 GCP02774 474 aa5.04□□□□□ -1.6
ECHDC1-201ENST00000368287 HMGCRP04035 888 aa5.04□□□□□ -1.6
ECHDC1-201ENST00000368287 PDE6AP16499 860 aa5.04□□□□□ -1.6
ECHDC1-201ENST00000368287 HSD3B2P26439 372 aa5.04□□□□□ -1.6
ECHDC1-201ENST00000368287 GJA4P35212 333 aa5.04□□□□□ -1.6
ECHDC1-201ENST00000368287 RRP1BQ14684 758 aaKnown RBP5.04□□□□□ -1.6
ECHDC1-201ENST00000368287 NTRK3Q16288 839 aa5.04□□□□□ -1.6
ECHDC1-201ENST00000368287 KIZQ2M2Z5 673 aa5.04□□□□□ -1.6
ECHDC1-201ENST00000368287 WDR72Q3MJ13 1102 aa5.04□□□□□ -1.6
ECHDC1-201ENST00000368287 PLEKHG4Q58EX7 1191 aa5.04□□□□□ -1.6
ECHDC1-201ENST00000368287 KCNT2Q6UVM3 1135 aa5.04□□□□□ -1.6
ECHDC1-201ENST00000368287 LBX2Q6XYB7 198 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms