RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 H2AFZP0C0S5 128 aa15.62■□□□□ 0.09
CD48-201ENST00000368045 ZNF76P36508 570 aa15.62■□□□□ 0.09
CD48-201ENST00000368045 TCP10Q12799 353 aa15.62■□□□□ 0.09
CD48-201ENST00000368045 CUL1Q13616 776 aa15.62■□□□□ 0.09
CD48-201ENST00000368045 DCAF17Q5H9S7 520 aaPredicted RBP15.62■□□□□ 0.09
CD48-201ENST00000368045 DACT2Q5SW24 774 aa15.62■□□□□ 0.09
CD48-201ENST00000368045 H2AFVQ71UI9 128 aa15.62■□□□□ 0.09
CD48-201ENST00000368045 SCFD2Q8WU76 684 aa15.62■□□□□ 0.09
CD48-201ENST00000368045 BORCS6Q96GS4 357 aa15.62■□□□□ 0.09
CD48-201ENST00000368045 ZIM3Q96PE6 472 aa15.62■□□□□ 0.09
CD48-201ENST00000368045 UIMC1Q96RL1 719 aa15.62■□□□□ 0.09
CD48-201ENST00000368045 RUSC1Q9BVN2 902 aa15.62■□□□□ 0.09
CD48-201ENST00000368045 NFU1Q9UMS0 254 aa15.62■□□□□ 0.09
CD48-201ENST00000368045 ADAMTSL1Q8N6G6 1762 aa15.61■□□□□ 0.09
CD48-201ENST00000368045 FAM196BA6NMK8 535 aa15.61■□□□□ 0.09
CD48-201ENST00000368045 CCDC188H7C350 402 aa15.61■□□□□ 0.09
CD48-201ENST00000368045 KCNK3O14649 394 aa15.61■□□□□ 0.09
CD48-201ENST00000368045 EIF3HO15372 352 aaKnown RBP eCLIP15.61■□□□□ 0.09
CD48-201ENST00000368045 HSPA9P38646 679 aaKnown RBP15.61■□□□□ 0.09
CD48-201ENST00000368045 STAT1P42224 750 aa15.61■□□□□ 0.09
CD48-201ENST00000368045 CORO7P57737 925 aa15.61■□□□□ 0.09
CD48-201ENST00000368045 MRPS25P82663 173 aaKnown RBP15.61■□□□□ 0.09
CD48-201ENST00000368045 ENOX2Q16206 610 aaKnown RBP15.61■□□□□ 0.09
CD48-201ENST00000368045 USH1GQ495M9 461 aa15.61■□□□□ 0.09
CD48-201ENST00000368045 TTMPQ5BVD1 217 aa15.61■□□□□ 0.09
CD48-201ENST00000368045 STXBP4Q6ZWJ1 553 aa15.61■□□□□ 0.09
CD48-201ENST00000368045 SLFN11Q7Z7L1 901 aa15.61■□□□□ 0.09
CD48-201ENST00000368045 TPCN2Q8NHX9 752 aa15.61■□□□□ 0.09
CD48-201ENST00000368045 RBM46Q8TBY0 533 aaKnown RBP15.61■□□□□ 0.09
CD48-201ENST00000368045 CASKIN2Q8WXE0 1202 aa15.61■□□□□ 0.09
CD48-201ENST00000368045 IFT81Q8WYA0 676 aa15.61■□□□□ 0.09
CD48-201ENST00000368045 CCDC43Q96MW1 224 aaKnown RBP15.61■□□□□ 0.09
CD48-201ENST00000368045 HSD17B14Q9BPX1 270 aa15.61■□□□□ 0.09
CD48-201ENST00000368045 HINFPQ9BQA5 517 aa15.61■□□□□ 0.09
CD48-201ENST00000368045 ISCUQ9H1K1 167 aa15.61■□□□□ 0.09
CD48-201ENST00000368045 TAF1DQ9H5J8 278 aaPredicted RBP15.61■□□□□ 0.09
CD48-201ENST00000368045 KCND2Q9NZV8 630 aa15.61■□□□□ 0.09
CD48-201ENST00000368045 GCNT4Q9P109 453 aa15.61■□□□□ 0.09
CD48-201ENST00000368045 SUCLA2Q9P2R7 463 aaPredicted RBP15.61■□□□□ 0.09
CD48-201ENST00000368045 AFF2P51816 1311 aa15.61■□□□□ 0.09
CD48-201ENST00000368045 KIF13BQ9NQT8 1826 aa15.61■□□□□ 0.09
CD48-201ENST00000368045 IGLV3-22A0A075B6J6 115 aa15.6■□□□□ 0.09
CD48-201ENST00000368045 BHMG1C9JSJ3 638 aaPredicted RBP15.6■□□□□ 0.09
CD48-201ENST00000368045 PGRMC1O00264 195 aaKnown RBP15.6■□□□□ 0.09
CD48-201ENST00000368045 OPLAHO14841 1288 aa15.6■□□□□ 0.09
CD48-201ENST00000368045 FAM13AO94988 1023 aa15.6■□□□□ 0.09
CD48-201ENST00000368045 PSMC2P35998 433 aaKnown RBP15.6■□□□□ 0.09
CD48-201ENST00000368045 MAGEA9P43362 315 aa15.6■□□□□ 0.09
CD48-201ENST00000368045 NOP2P46087 812 aaKnown RBP15.6■□□□□ 0.09
CD48-201ENST00000368045 RBM26Q5T8P6 1007 aaKnown RBP15.6■□□□□ 0.09
CD48-201ENST00000368045 TCERG1LQ5VWI1 586 aa15.6■□□□□ 0.09
CD48-201ENST00000368045 RINT1Q6NUQ1 792 aa15.6■□□□□ 0.09
CD48-201ENST00000368045 LRIG3Q6UXM1 1119 aa15.6■□□□□ 0.09
CD48-201ENST00000368045 KIAA0825Q8IV33 1275 aa15.6■□□□□ 0.09
CD48-201ENST00000368045 EHMT1Q9H9B1 1298 aa15.6■□□□□ 0.09
CD48-201ENST00000368045 MYH10P35580 1976 aa15.6■□□□□ 0.09
CD48-201ENST00000368045 SHTN1A0MZ66 631 aa15.59■□□□□ 0.09
CD48-201ENST00000368045 RSPH10B2B2RC85 870 aa15.59■□□□□ 0.09
CD48-201ENST00000368045 TGFB1I1O43294 461 aa15.59■□□□□ 0.09
CD48-201ENST00000368045 RAD51CO43502 376 aa15.59■□□□□ 0.09
CD48-201ENST00000368045 RSPH10BP0C881 870 aa15.59■□□□□ 0.09
CD48-201ENST00000368045 SLURP2P0DP57 97 aa15.59■□□□□ 0.09
CD48-201ENST00000368045 RBM5P52756 815 aaKnown RBP eCLIP15.59■□□□□ 0.09
CD48-201ENST00000368045 CACNB3P54284 484 aa15.59■□□□□ 0.09
CD48-201ENST00000368045 GNGT1P63211 74 aa15.59■□□□□ 0.09
CD48-201ENST00000368045 PPP2R5CQ13362 524 aa15.59■□□□□ 0.09
CD48-201ENST00000368045 SHROOM1Q2M3G4 852 aaPredicted RBP15.59■□□□□ 0.09
CD48-201ENST00000368045 FAM186BQ8IYM0 893 aa15.59■□□□□ 0.09
CD48-201ENST00000368045 RASGEF1CQ8N431 466 aa15.59■□□□□ 0.09
CD48-201ENST00000368045 ARL8AQ96BM9 186 aa15.59■□□□□ 0.09
CD48-201ENST00000368045 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.59■□□□□ 0.09
CD48-201ENST00000368045 DBNDD1Q9H9R9 158 aa15.59■□□□□ 0.09
CD48-201ENST00000368045 PACSIN2Q9UNF0 486 aaPredicted RBP15.59■□□□□ 0.09
CD48-201ENST00000368045 EML1O00423 815 aa15.59■□□□□ 0.09
CD48-201ENST00000368045 CCDC172P0C7W6 258 aa15.59■□□□□ 0.09
CD48-201ENST00000368045 ZBTB48P10074 688 aaPredicted RBP15.59■□□□□ 0.09
CD48-201ENST00000368045 LMNB1P20700 586 aa15.59■□□□□ 0.09
CD48-201ENST00000368045 DNA2P51530 1060 aa15.59■□□□□ 0.09
CD48-201ENST00000368045 CYP4A11Q02928 519 aa15.59■□□□□ 0.09
CD48-201ENST00000368045 KDM7AQ6ZMT4 941 aa15.59■□□□□ 0.09
CD48-201ENST00000368045 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.59■□□□□ 0.09
CD48-201ENST00000368045 C1orf186Q6ZWK4 172 aa15.59■□□□□ 0.09
CD48-201ENST00000368045 C10orf67Q8IYJ2 551 aa15.59■□□□□ 0.09
CD48-201ENST00000368045 SLC5A5Q92911 643 aa15.59■□□□□ 0.09
CD48-201ENST00000368045 SLITRK6Q9H5Y7 841 aa15.59■□□□□ 0.09
CD48-201ENST00000368045 PARVGQ9HBI0 331 aa15.59■□□□□ 0.09
CD48-201ENST00000368045 KCNQ5Q9NR82 932 aa15.59■□□□□ 0.09
CD48-201ENST00000368045 PRR12Q9ULL5 1215 aa15.59■□□□□ 0.09
CD48-201ENST00000368045 STXBP5LQ9Y2K9 1186 aa15.59■□□□□ 0.09
CD48-201ENST00000368045 DIS3Q9Y2L1 958 aaKnown RBP15.59■□□□□ 0.09
CD48-201ENST00000368045 GRIN2DO15399 1336 aa15.59■□□□□ 0.09
CD48-201ENST00000368045 DDX3XO00571 662 aaKnown RBP eCLIP15.58■□□□□ 0.08
CD48-201ENST00000368045 CEP104O60308 925 aa15.58■□□□□ 0.08
CD48-201ENST00000368045 ZEB2O60315 1214 aa15.58■□□□□ 0.08
CD48-201ENST00000368045 PSMD10O75832 226 aa15.58■□□□□ 0.08
CD48-201ENST00000368045 GDF11O95390 407 aa15.58■□□□□ 0.08
CD48-201ENST00000368045 FAM153BP0C7A2 387 aa15.58■□□□□ 0.08
CD48-201ENST00000368045 CASP4P49662 377 aa15.58■□□□□ 0.08
CD48-201ENST00000368045 ZNF131P52739 623 aa15.58■□□□□ 0.08
CD48-201ENST00000368045 SNAP25P60880 206 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms