RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 LPXNO60711 386 aa16.53■□□□□ 0.24
SF3B5-201ENST00000367569 GJB5O95377 273 aa16.53■□□□□ 0.24
SF3B5-201ENST00000367569 PSAPP07602 524 aa16.53■□□□□ 0.24
SF3B5-201ENST00000367569 ADAM17P78536 824 aa16.53■□□□□ 0.24
SF3B5-201ENST00000367569 PRKCEQ02156 737 aa16.53■□□□□ 0.24
SF3B5-201ENST00000367569 TFF2Q03403 129 aa16.53■□□□□ 0.24
SF3B5-201ENST00000367569 GRB10Q13322 594 aa16.53■□□□□ 0.24
SF3B5-201ENST00000367569 IKBKEQ14164 716 aa16.53■□□□□ 0.24
SF3B5-201ENST00000367569 MARCH8Q5T0T0 291 aa16.53■□□□□ 0.24
SF3B5-201ENST00000367569 POTEBQ6S5H4 581 aa16.53■□□□□ 0.24
SF3B5-201ENST00000367569 MOXD1Q6UVY6 613 aa16.53■□□□□ 0.24
SF3B5-201ENST00000367569 BANK1Q8NDB2 785 aa16.53■□□□□ 0.24
SF3B5-201ENST00000367569 TSPYL2Q9H2G4 693 aaPredicted RBP16.53■□□□□ 0.24
SF3B5-201ENST00000367569 KCNMB3Q9NPA1 279 aa16.53■□□□□ 0.24
SF3B5-201ENST00000367569 VAV3Q9UKW4 847 aa16.53■□□□□ 0.24
SF3B5-201ENST00000367569 PCDHA10Q9Y5I2 948 aa16.53■□□□□ 0.24
SF3B5-201ENST00000367569 NRCAMQ92823 1304 aa16.52■□□□□ 0.24
SF3B5-201ENST00000367569 RSPH10B2B2RC85 870 aa16.52■□□□□ 0.24
SF3B5-201ENST00000367569 EML1O00423 815 aa16.52■□□□□ 0.24
SF3B5-201ENST00000367569 ZNF862O60290 1169 aa16.52■□□□□ 0.24
SF3B5-201ENST00000367569 MARCH6O60337 910 aa16.52■□□□□ 0.24
SF3B5-201ENST00000367569 RSPH10BP0C881 870 aa16.52■□□□□ 0.24
SF3B5-201ENST00000367569 MCM7P33993 719 aa16.52■□□□□ 0.24
SF3B5-201ENST00000367569 SKIV2LQ15477 1246 aaKnown RBP16.52■□□□□ 0.24
SF3B5-201ENST00000367569 NCAPH2Q6IBW4 605 aa16.52■□□□□ 0.24
SF3B5-201ENST00000367569 FAM117BQ6P1L5 589 aa16.52■□□□□ 0.24
SF3B5-201ENST00000367569 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.52■□□□□ 0.24
SF3B5-201ENST00000367569 PLPPR4Q7Z2D5 763 aa16.52■□□□□ 0.24
SF3B5-201ENST00000367569 SMAP1Q8IYB5 467 aaPredicted RBP16.52■□□□□ 0.24
SF3B5-201ENST00000367569 DBF4BQ8NFT6 615 aa16.52■□□□□ 0.24
SF3B5-201ENST00000367569 FBXO18Q8NFZ0 1043 aa16.52■□□□□ 0.24
SF3B5-201ENST00000367569 ATP8B4Q8TF62 1192 aa16.52■□□□□ 0.24
SF3B5-201ENST00000367569 DNAJB3Q8WWF6 145 aa16.52■□□□□ 0.24
SF3B5-201ENST00000367569 HAS1Q92839 578 aa16.52■□□□□ 0.24
SF3B5-201ENST00000367569 RIT2Q99578 217 aa16.52■□□□□ 0.24
SF3B5-201ENST00000367569 RAD9AQ99638 391 aa16.52■□□□□ 0.24
SF3B5-201ENST00000367569 SH2D3AQ9BRG2 576 aa16.52■□□□□ 0.24
SF3B5-201ENST00000367569 SMC3Q9UQE7 1217 aa16.52■□□□□ 0.24
SF3B5-201ENST00000367569 COL4A4P53420 1690 aaPredicted RBP16.51■□□□□ 0.23
SF3B5-201ENST00000367569 NEMFO60524 1076 aa16.51■□□□□ 0.23
SF3B5-201ENST00000367569 EFCAB14O75071 495 aa16.51■□□□□ 0.23
SF3B5-201ENST00000367569 GNAT1P11488 350 aa16.51■□□□□ 0.23
SF3B5-201ENST00000367569 BMP1P13497 986 aa16.51■□□□□ 0.23
SF3B5-201ENST00000367569 GCFC2P16383 781 aaKnown RBP16.51■□□□□ 0.23
SF3B5-201ENST00000367569 MKRN4PQ13434 485 aaPredicted RBP16.51■□□□□ 0.23
SF3B5-201ENST00000367569 MCTP1Q6DN14 999 aa16.51■□□□□ 0.23
SF3B5-201ENST00000367569 UHRF1Q96T88 793 aaPredicted RBP16.51■□□□□ 0.23
SF3B5-201ENST00000367569 TMEM60Q9H2L4 133 aa16.51■□□□□ 0.23
SF3B5-201ENST00000367569 BRWD1Q9NSI6 2320 aa16.51■□□□□ 0.23
SF3B5-201ENST00000367569 ZBTB42B2RXF5 422 aa16.5■□□□□ 0.23
SF3B5-201ENST00000367569 KCNQ1P51787 676 aa16.5■□□□□ 0.23
SF3B5-201ENST00000367569 JAK3P52333 1124 aa16.5■□□□□ 0.23
SF3B5-201ENST00000367569 ZNF174Q15697 407 aa16.5■□□□□ 0.23
SF3B5-201ENST00000367569 CALCRLQ16602 461 aa16.5■□□□□ 0.23
SF3B5-201ENST00000367569 PPP4R3AQ6IN85 833 aa16.5■□□□□ 0.23
SF3B5-201ENST00000367569 NECAB3Q96P71 396 aaPredicted RBP16.5■□□□□ 0.23
SF3B5-201ENST00000367569 SEPT9Q9UHD8 586 aaPredicted RBP16.5■□□□□ 0.23
SF3B5-201ENST00000367569 MTUS1Q9ULD2 1270 aa16.5■□□□□ 0.23
SF3B5-201ENST00000367569 MAFBQ9Y5Q3 323 aaPredicted RBP16.5■□□□□ 0.23
SF3B5-201ENST00000367569 LINC01553A4QN01 128 aa16.49■□□□□ 0.23
SF3B5-201ENST00000367569 OATP04181 439 aa16.49■□□□□ 0.23
SF3B5-201ENST00000367569 GHRP10912 638 aa16.49■□□□□ 0.23
SF3B5-201ENST00000367569 MCM2P49736 904 aa16.49■□□□□ 0.23
SF3B5-201ENST00000367569 CYP4A11Q02928 519 aa16.49■□□□□ 0.23
SF3B5-201ENST00000367569 PLEKHG4Q58EX7 1191 aa16.49■□□□□ 0.23
SF3B5-201ENST00000367569 PLA2G4FQ68DD2 849 aa16.49■□□□□ 0.23
SF3B5-201ENST00000367569 B3GNT9Q6UX72 402 aa16.49■□□□□ 0.23
SF3B5-201ENST00000367569 NOSTRINQ8IVI9 506 aa16.49■□□□□ 0.23
SF3B5-201ENST00000367569 IL27Q8NEV9 243 aa16.49■□□□□ 0.23
SF3B5-201ENST00000367569 GDPD5Q8WTR4 605 aa16.49■□□□□ 0.23
SF3B5-201ENST00000367569 ZNF668Q96K58 619 aaPredicted RBP16.49■□□□□ 0.23
SF3B5-201ENST00000367569 SUGCTQ9HAC7 445 aa16.49■□□□□ 0.23
SF3B5-201ENST00000367569 BMP2KQ9NSY1 1161 aaPredicted RBP16.49■□□□□ 0.23
SF3B5-201ENST00000367569 WRAP73Q9P2S5 460 aaPredicted RBP16.49■□□□□ 0.23
SF3B5-201ENST00000367569 CDY2AQ9Y6F7 541 aa16.49■□□□□ 0.23
SF3B5-201ENST00000367569 MYH15Q9Y2K3 1946 aa16.49■□□□□ 0.23
SF3B5-201ENST00000367569 MBLAC1A4D2B0 266 aaPredicted RBP16.48■□□□□ 0.23
SF3B5-201ENST00000367569 POTEMA6NI47 508 aa16.48■□□□□ 0.23
SF3B5-201ENST00000367569 HBP1O60381 514 aa16.48■□□□□ 0.23
SF3B5-201ENST00000367569 C22orf31O95567 290 aa16.48■□□□□ 0.23
SF3B5-201ENST00000367569 KLRC1P26715 233 aa16.48■□□□□ 0.23
SF3B5-201ENST00000367569 SFNP31947 248 aa16.48■□□□□ 0.23
SF3B5-201ENST00000367569 TXKP42681 527 aa16.48■□□□□ 0.23
SF3B5-201ENST00000367569 CLCN3P51790 818 aa16.48■□□□□ 0.23
SF3B5-201ENST00000367569 ERVK-21P61565 698 aa16.48■□□□□ 0.23
SF3B5-201ENST00000367569 MTERF2Q49AM1 385 aa16.48■□□□□ 0.23
SF3B5-201ENST00000367569 TTC38Q5R3I4 469 aa16.48■□□□□ 0.23
SF3B5-201ENST00000367569 MTHFD1LQ6UB35 978 aa16.48■□□□□ 0.23
SF3B5-201ENST00000367569 LRRC71Q8N4P6 559 aa16.48■□□□□ 0.23
SF3B5-201ENST00000367569 TGS1Q96RS0 853 aaKnown RBP16.48■□□□□ 0.23
SF3B5-201ENST00000367569 NAP1L4Q99733 375 aaKnown RBP16.48■□□□□ 0.23
SF3B5-201ENST00000367569 FOXP1Q9H334 677 aaPredicted RBP16.48■□□□□ 0.23
SF3B5-201ENST00000367569 GINS2Q9Y248 185 aa16.48■□□□□ 0.23
SF3B5-201ENST00000367569 RRN3P2A6NIE6 340 aa16.47■□□□□ 0.23
SF3B5-201ENST00000367569 H3BQV1 296 aa16.47■□□□□ 0.23
SF3B5-201ENST00000367569 CHRNA1P02708 482 aa16.47■□□□□ 0.23
SF3B5-201ENST00000367569 AMHP03971 560 aa16.47■□□□□ 0.23
SF3B5-201ENST00000367569 SLC26A2P50443 739 aa16.47■□□□□ 0.23
SF3B5-201ENST00000367569 MRPS6P82932 125 aaKnown RBP16.47■□□□□ 0.23
SF3B5-201ENST00000367569 SPIRE1Q08AE8 756 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms