RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 METTL13Q8N6R0 699 aa13.46□□□□□ -0.25
PTPN7-202ENST00000367279 SYT2Q8N9I0 419 aaPredicted RBP13.46□□□□□ -0.25
PTPN7-202ENST00000367279 CCDC17Q96LX7 622 aa13.46□□□□□ -0.25
PTPN7-202ENST00000367279 GLT8D2Q9H1C3 349 aa13.46□□□□□ -0.25
PTPN7-202ENST00000367279 GRIN2DO15399 1336 aa13.46□□□□□ -0.26
PTPN7-202ENST00000367279 UBAP1LF5GYI3 381 aa13.45□□□□□ -0.26
PTPN7-202ENST00000367279 PGRMC1O00264 195 aaKnown RBP13.45□□□□□ -0.26
PTPN7-202ENST00000367279 MSH4O15457 936 aa13.45□□□□□ -0.26
PTPN7-202ENST00000367279 ERLIN2O94905 339 aa13.45□□□□□ -0.26
PTPN7-202ENST00000367279 CTNNA1P35221 906 aaKnown RBP13.45□□□□□ -0.26
PTPN7-202ENST00000367279 ZYXQ15942 572 aaKnown RBP13.45□□□□□ -0.26
PTPN7-202ENST00000367279 TADA2BQ86TJ2 420 aa13.45□□□□□ -0.26
PTPN7-202ENST00000367279 GLYCTKQ8IVS8 523 aa13.45□□□□□ -0.26
PTPN7-202ENST00000367279 EFCAB13Q8IY85 973 aa13.45□□□□□ -0.26
PTPN7-202ENST00000367279 EIF2AK1Q9BQI3 630 aaKnown RBP13.45□□□□□ -0.26
PTPN7-202ENST00000367279 CELF4Q9BZC1 486 aaKnown RBP13.45□□□□□ -0.26
PTPN7-202ENST00000367279 TAF1DQ9H5J8 278 aaPredicted RBP13.45□□□□□ -0.26
PTPN7-202ENST00000367279 GOPCQ9HD26 462 aa13.45□□□□□ -0.26
PTPN7-202ENST00000367279 TMEM110-MUSTN1A8MSY1 372 aa13.45□□□□□ -0.26
PTPN7-202ENST00000367279 DDX39AO00148 427 aaKnown RBP13.45□□□□□ -0.26
PTPN7-202ENST00000367279 EML1O00423 815 aa13.45□□□□□ -0.26
PTPN7-202ENST00000367279 SART1O43290 800 aaKnown RBP13.45□□□□□ -0.26
PTPN7-202ENST00000367279 PPP1R12BO60237 982 aaPredicted RBP13.45□□□□□ -0.26
PTPN7-202ENST00000367279 TRIM49P0CI25 452 aa13.45□□□□□ -0.26
PTPN7-202ENST00000367279 TRIM49CP0CI26 452 aa13.45□□□□□ -0.26
PTPN7-202ENST00000367279 RPA1P27694 616 aa13.45□□□□□ -0.26
PTPN7-202ENST00000367279 INPP5BP32019 993 aa13.45□□□□□ -0.26
PTPN7-202ENST00000367279 HOXD13P35453 343 aa13.45□□□□□ -0.26
PTPN7-202ENST00000367279 COG2Q14746 738 aa13.45□□□□□ -0.26
PTPN7-202ENST00000367279 FAM186BQ8IYM0 893 aa13.45□□□□□ -0.26
PTPN7-202ENST00000367279 WHAMMQ8TF30 809 aa13.45□□□□□ -0.26
PTPN7-202ENST00000367279 CRAMP1Q96RY5 1269 aa13.45□□□□□ -0.26
PTPN7-202ENST00000367279 PITPNM2Q9BZ72 1349 aa13.45□□□□□ -0.26
PTPN7-202ENST00000367279 E7EVH7 732 aa13.45□□□□□ -0.26
PTPN7-202ENST00000367279 DAPK3O43293 454 aa13.45□□□□□ -0.26
PTPN7-202ENST00000367279 LRRN2O75325 713 aa13.45□□□□□ -0.26
PTPN7-202ENST00000367279 COPB2P35606 906 aa13.45□□□□□ -0.26
PTPN7-202ENST00000367279 USP8P40818 1118 aa13.45□□□□□ -0.26
PTPN7-202ENST00000367279 STAT1P42224 750 aa13.45□□□□□ -0.26
PTPN7-202ENST00000367279 ABCB5Q2M3G0 1257 aa13.45□□□□□ -0.26
PTPN7-202ENST00000367279 ETNPPLQ8TBG4 499 aa13.45□□□□□ -0.26
PTPN7-202ENST00000367279 OSGEPQ9NPF4 335 aa13.45□□□□□ -0.26
PTPN7-202ENST00000367279 TYW1Q9NV66 732 aaKnown RBP13.45□□□□□ -0.26
PTPN7-202ENST00000367279 NDUFB10O96000 172 aa13.44□□□□□ -0.26
PTPN7-202ENST00000367279 MARSP56192 900 aaKnown RBP13.44□□□□□ -0.26
PTPN7-202ENST00000367279 SF3A3Q12874 501 aaKnown RBP eCLIP13.44□□□□□ -0.26
PTPN7-202ENST00000367279 TBC1D10BQ4KMP7 808 aaPredicted RBP13.44□□□□□ -0.26
PTPN7-202ENST00000367279 SYDE2Q5VT97 1194 aa13.44□□□□□ -0.26
PTPN7-202ENST00000367279 SYCP3Q8IZU3 236 aa13.44□□□□□ -0.26
PTPN7-202ENST00000367279 IQCKQ8N0W5 287 aa13.44□□□□□ -0.26
PTPN7-202ENST00000367279 TPCN2Q8NHX9 752 aa13.44□□□□□ -0.26
PTPN7-202ENST00000367279 BZW2Q9Y6E2 419 aaKnown RBP13.44□□□□□ -0.26
PTPN7-202ENST00000367279 A0A087WUV0 522 aaPredicted RBP13.44□□□□□ -0.26
PTPN7-202ENST00000367279 GCOM1H8Y6P7 765 aaPredicted RBP13.44□□□□□ -0.26
PTPN7-202ENST00000367279 PDXKO00764 312 aa13.44□□□□□ -0.26
PTPN7-202ENST00000367279 BACH1O14867 736 aa13.44□□□□□ -0.26
PTPN7-202ENST00000367279 GH2P01242 217 aa13.44□□□□□ -0.26
PTPN7-202ENST00000367279 MYZAPP0CAP1 466 aa13.44□□□□□ -0.26
PTPN7-202ENST00000367279 HOXA7P31268 230 aaPredicted RBP13.44□□□□□ -0.26
PTPN7-202ENST00000367279 AP3B2Q13367 1082 aa13.44□□□□□ -0.26
PTPN7-202ENST00000367279 DCAF4Q8WV16 495 aa13.44□□□□□ -0.26
PTPN7-202ENST00000367279 LMBR1Q8WVP7 490 aa13.44□□□□□ -0.26
PTPN7-202ENST00000367279 DYDC2Q96IM9 177 aa13.44□□□□□ -0.26
PTPN7-202ENST00000367279 PBKQ96KB5 322 aa13.44□□□□□ -0.26
PTPN7-202ENST00000367279 PI4KBQ9UBF8 816 aa13.44□□□□□ -0.26
PTPN7-202ENST00000367279 ASTN1O14525 1302 aa13.44□□□□□ -0.26
PTPN7-202ENST00000367279 TTI1O43156 1089 aa13.44□□□□□ -0.26
PTPN7-202ENST00000367279 TNFRSF8P28908 595 aa13.44□□□□□ -0.26
PTPN7-202ENST00000367279 LSP1P33241 339 aa13.44□□□□□ -0.26
PTPN7-202ENST00000367279 GALCP54803 685 aa13.44□□□□□ -0.26
PTPN7-202ENST00000367279 ZNF211Q13398 564 aaPredicted RBP13.44□□□□□ -0.26
PTPN7-202ENST00000367279 EPHA7Q15375 998 aa13.44□□□□□ -0.26
PTPN7-202ENST00000367279 ARHGAP27Q6ZUM4 889 aa13.44□□□□□ -0.26
PTPN7-202ENST00000367279 OTUD6BQ8N6M0 293 aa13.44□□□□□ -0.26
PTPN7-202ENST00000367279 SLC35C1Q96A29 364 aa13.44□□□□□ -0.26
PTPN7-202ENST00000367279 ATP6V1G3Q96LB4 118 aa13.44□□□□□ -0.26
PTPN7-202ENST00000367279 METTL14Q9HCE5 456 aaKnown RBP13.44□□□□□ -0.26
PTPN7-202ENST00000367279 TRAF3IP3Q9Y228 551 aa13.44□□□□□ -0.26
PTPN7-202ENST00000367279 EP400Q96L91 3159 aa13.43□□□□□ -0.26
PTPN7-202ENST00000367279 SMIM23A6NLE4 172 aa13.43□□□□□ -0.26
PTPN7-202ENST00000367279 POLRMTO00411 1230 aaKnown RBP13.43□□□□□ -0.26
PTPN7-202ENST00000367279 EVI5O60447 810 aa13.43□□□□□ -0.26
PTPN7-202ENST00000367279 ADRA2BP18089 450 aa13.43□□□□□ -0.26
PTPN7-202ENST00000367279 POLD1P28340 1107 aa13.43□□□□□ -0.26
PTPN7-202ENST00000367279 HSD17B3P37058 310 aa13.43□□□□□ -0.26
PTPN7-202ENST00000367279 SLC20A2Q08357 652 aa13.43□□□□□ -0.26
PTPN7-202ENST00000367279 SPIRE1Q08AE8 756 aa13.43□□□□□ -0.26
PTPN7-202ENST00000367279 IFFO1Q0D2I5 559 aa13.43□□□□□ -0.26
PTPN7-202ENST00000367279 PIK3R5Q8WYR1 880 aa13.43□□□□□ -0.26
PTPN7-202ENST00000367279 AMFRQ9UKV5 643 aa13.43□□□□□ -0.26
PTPN7-202ENST00000367279 DDX3XO00571 662 aaKnown RBP eCLIP13.43□□□□□ -0.261e-6■□□□□ 8.9
PTPN7-202ENST00000367279 FGGP02679 453 aa13.43□□□□□ -0.26
PTPN7-202ENST00000367279 BMP3P12645 472 aa13.43□□□□□ -0.26
PTPN7-202ENST00000367279 HOXA10P31260 410 aaPredicted RBP13.43□□□□□ -0.26
PTPN7-202ENST00000367279 C10orf76Q5T2E6 689 aa13.43□□□□□ -0.26
PTPN7-202ENST00000367279 LRCH2Q5VUJ6 765 aa13.43□□□□□ -0.26
PTPN7-202ENST00000367279 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.43□□□□□ -0.26
PTPN7-202ENST00000367279 TRIM51Q9BSJ1 452 aa13.43□□□□□ -0.26
PTPN7-202ENST00000367279 NEUROG2Q9H2A3 272 aa13.43□□□□□ -0.26
PTPN7-202ENST00000367279 TDRD3Q9H7E2 651 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms