RNA–Protein interactions for RNA: ENST00000367251.7

SYNE1-205, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 5,837 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-205ENST00000367251 TLR3O15455 904 aaKnown RBP9.7□□□□□ -0.86
SYNE1-205ENST00000367251 CTNND1O60716 968 aaKnown RBP9.7□□□□□ -0.86
SYNE1-205ENST00000367251 SLC16A2P36021 539 aa9.7□□□□□ -0.86
SYNE1-205ENST00000367251 ARHGAP4P98171 946 aa9.7□□□□□ -0.86
SYNE1-205ENST00000367251 CYP27A1Q02318 531 aa9.7□□□□□ -0.86
SYNE1-205ENST00000367251 MYLK4Q86YV6 388 aaPredicted RBP9.7□□□□□ -0.86
SYNE1-205ENST00000367251 PPP1R12CQ9BZL4 782 aa9.7□□□□□ -0.86
SYNE1-205ENST00000367251 PIDD1Q9HB75 910 aa9.7□□□□□ -0.86
SYNE1-205ENST00000367251 IPO11Q9UI26 975 aaKnown RBP9.7□□□□□ -0.86
SYNE1-205ENST00000367251 CPS1P31327 1500 aa9.7□□□□□ -0.86
SYNE1-205ENST00000367251 KRT1P04264 644 aa9.69□□□□□ -0.86
SYNE1-205ENST00000367251 SRGAP2BP0DMP2 458 aa9.69□□□□□ -0.86
SYNE1-205ENST00000367251 ZSCAN20P17040 1043 aaPredicted RBP9.69□□□□□ -0.86
SYNE1-205ENST00000367251 CDC25AP30304 524 aa9.69□□□□□ -0.86
SYNE1-205ENST00000367251 MSH2P43246 934 aa9.69□□□□□ -0.86
SYNE1-205ENST00000367251 MAGEA9P43362 315 aa9.69□□□□□ -0.86
SYNE1-205ENST00000367251 TBCCQ15814 346 aa9.69□□□□□ -0.86
SYNE1-205ENST00000367251 UBE2SQ16763 222 aa9.69□□□□□ -0.86
SYNE1-205ENST00000367251 NAA35Q5VZE5 725 aa9.69□□□□□ -0.86
SYNE1-205ENST00000367251 DNAJC24Q6P3W2 148 aa9.69□□□□□ -0.86
SYNE1-205ENST00000367251 PCGF5Q86SE9 256 aa9.69□□□□□ -0.86
SYNE1-205ENST00000367251 METTL16Q86W50 562 aaKnown RBP9.69□□□□□ -0.86
SYNE1-205ENST00000367251 GDAP1Q8TB36 358 aa9.69□□□□□ -0.86
SYNE1-205ENST00000367251 ADAM21Q9UKJ8 722 aa9.69□□□□□ -0.86
SYNE1-205ENST00000367251 PCDHA6Q9UN73 950 aa9.69□□□□□ -0.86
SYNE1-205ENST00000367251 PCDHA8Q9Y5H6 950 aa9.69□□□□□ -0.86
SYNE1-205ENST00000367251 DIP2AQ14689 1571 aa9.69□□□□□ -0.86
SYNE1-205ENST00000367251 ABCB11O95342 1321 aa9.69□□□□□ -0.86
SYNE1-205ENST00000367251 LRRC53A6NM62 1247 aa9.69□□□□□ -0.86
SYNE1-205ENST00000367251 H7C0C1 242 aa9.69□□□□□ -0.86
SYNE1-205ENST00000367251 MGEA5O60502 916 aa9.69□□□□□ -0.86
SYNE1-205ENST00000367251 PALMO75781 387 aa9.69□□□□□ -0.86
SYNE1-205ENST00000367251 ATP5HO75947 161 aa9.69□□□□□ -0.86
SYNE1-205ENST00000367251 MYBL1P10243 752 aa9.69□□□□□ -0.86
SYNE1-205ENST00000367251 ATP5OP48047 213 aa9.69□□□□□ -0.86
SYNE1-205ENST00000367251 CCZ1BP86790 482 aa9.69□□□□□ -0.86
SYNE1-205ENST00000367251 CCZ1P86791 482 aaPredicted RBP9.69□□□□□ -0.86
SYNE1-205ENST00000367251 SCYL2Q6P3W7 929 aa9.69□□□□□ -0.86
SYNE1-205ENST00000367251 FRMD5Q7Z6J6 570 aa9.69□□□□□ -0.86
SYNE1-205ENST00000367251 ADAT2Q7Z6V5 191 aaKnown RBP9.69□□□□□ -0.86
SYNE1-205ENST00000367251 MID2Q9UJV3 735 aa9.69□□□□□ -0.86
SYNE1-205ENST00000367251 BAG5Q9UL15 447 aa9.69□□□□□ -0.86
SYNE1-205ENST00000367251 DEPDC5O75140 1603 aa9.69□□□□□ -0.86
SYNE1-205ENST00000367251 PDS5AQ29RF7 1337 aaKnown RBP9.69□□□□□ -0.86
SYNE1-205ENST00000367251 KIF20BQ96Q89 1820 aa9.69□□□□□ -0.86
SYNE1-205ENST00000367251 NR3C1P04150 777 aa9.69□□□□□ -0.86
SYNE1-205ENST00000367251 NOP14P78316 857 aaKnown RBP9.69□□□□□ -0.86
SYNE1-205ENST00000367251 NEDD1Q8NHV4 660 aa9.69□□□□□ -0.86
SYNE1-205ENST00000367251 CEP170P1Q96L14 293 aa9.69□□□□□ -0.86
SYNE1-205ENST00000367251 TBC1D22BQ9NU19 505 aa9.69□□□□□ -0.86
SYNE1-205ENST00000367251 PTPN22Q9Y2R2 807 aa9.69□□□□□ -0.86
SYNE1-205ENST00000367251 SLC16A3O15427 465 aaKnown RBP9.69□□□□□ -0.86
SYNE1-205ENST00000367251 SMARCA1P28370 1054 aa9.69□□□□□ -0.86
SYNE1-205ENST00000367251 KNOP1Q1ED39 458 aaKnown RBP9.69□□□□□ -0.86
SYNE1-205ENST00000367251 OSBPL9Q96SU4 736 aa9.69□□□□□ -0.86
SYNE1-205ENST00000367251 FEM1BQ9UK73 627 aa9.69□□□□□ -0.86
SYNE1-205ENST00000367251 ZMYND10O75800 440 aa9.69□□□□□ -0.86
SYNE1-205ENST00000367251 OSBPP22059 807 aa9.69□□□□□ -0.86
SYNE1-205ENST00000367251 YWHAGP61981 247 aaKnown RBP eCLIP9.69□□□□□ -0.86
SYNE1-205ENST00000367251 GPC5P78333 572 aa9.69□□□□□ -0.86
SYNE1-205ENST00000367251 RBM41Q96IZ5 413 aaKnown RBP9.69□□□□□ -0.86
SYNE1-205ENST00000367251 TTC25Q96NG3 672 aa9.69□□□□□ -0.86
SYNE1-205ENST00000367251 UBN1Q9NPG3 1134 aa9.69□□□□□ -0.86
SYNE1-205ENST00000367251 DNAJC12Q9UKB3 198 aa9.69□□□□□ -0.86
SYNE1-205ENST00000367251 NOVA2Q9UNW9 492 aaKnown RBP9.69□□□□□ -0.86
SYNE1-205ENST00000367251 ZNF233A6NK53 670 aa9.68□□□□□ -0.86
SYNE1-205ENST00000367251 ZNF189O75820 626 aaPredicted RBP9.68□□□□□ -0.86
SYNE1-205ENST00000367251 GSTA1P08263 222 aa9.68□□□□□ -0.86
SYNE1-205ENST00000367251 GSTA2P09210 222 aa9.68□□□□□ -0.86
SYNE1-205ENST00000367251 KPNA2P52292 529 aaKnown RBP9.68□□□□□ -0.86
SYNE1-205ENST00000367251 RASGRP2Q7LDG7 609 aa9.68□□□□□ -0.86
SYNE1-205ENST00000367251 TTC13Q8NBP0 860 aa9.68□□□□□ -0.86
SYNE1-205ENST00000367251 IGDCC4Q8TDY8 1250 aa9.68□□□□□ -0.86
SYNE1-205ENST00000367251 VCX3AQ9NNX9 186 aa9.68□□□□□ -0.86
SYNE1-205ENST00000367251 ABCF3Q9NUQ8 709 aa9.68□□□□□ -0.86
SYNE1-205ENST00000367251 ADAMTS1Q9UHI8 967 aa9.68□□□□□ -0.86
SYNE1-205ENST00000367251 PLAAQ9Y263 795 aa9.68□□□□□ -0.86
SYNE1-205ENST00000367251 ATF5Q9Y2D1 282 aaPredicted RBP9.68□□□□□ -0.86
SYNE1-205ENST00000367251 TADA3O75528 432 aa9.68□□□□□ -0.86
SYNE1-205ENST00000367251 CXCR5P32302 372 aa9.68□□□□□ -0.86
SYNE1-205ENST00000367251 VPS41P49754 854 aa9.68□□□□□ -0.86
SYNE1-205ENST00000367251 DPYDQ12882 1025 aa9.68□□□□□ -0.86
SYNE1-205ENST00000367251 NBPF9Q3BBW0 867 aa9.68□□□□□ -0.86
SYNE1-205ENST00000367251 PDXDC1Q6P996 788 aa9.68□□□□□ -0.86
SYNE1-205ENST00000367251 CENPUQ71F23 418 aa9.68□□□□□ -0.86
SYNE1-205ENST00000367251 ENOSF1Q7L5Y1 443 aa9.68□□□□□ -0.86
SYNE1-205ENST00000367251 MIPOL1Q8TD10 442 aa9.68□□□□□ -0.86
SYNE1-205ENST00000367251 ANKRD7Q92527 254 aa9.68□□□□□ -0.86
SYNE1-205ENST00000367251 PPP2R3CQ969Q6 453 aa9.68□□□□□ -0.86
SYNE1-205ENST00000367251 MASTLQ96GX5 879 aa9.68□□□□□ -0.86
SYNE1-205ENST00000367251 C7orf25Q9BPX7 421 aa9.68□□□□□ -0.86
SYNE1-205ENST00000367251 LBHD1Q9BQE6 289 aaPredicted RBP9.68□□□□□ -0.86
SYNE1-205ENST00000367251 TIPINQ9BVW5 301 aa9.68□□□□□ -0.86
SYNE1-205ENST00000367251 KCNF1Q9H3M0 494 aa9.68□□□□□ -0.86
SYNE1-205ENST00000367251 NFU1Q9UMS0 254 aa9.68□□□□□ -0.86
SYNE1-205ENST00000367251 SYNJ2BP-COX16A0A087WUM0 186 aa9.68□□□□□ -0.86
SYNE1-205ENST00000367251 USP17L5A8MUK1 530 aa9.68□□□□□ -0.86
SYNE1-205ENST00000367251 MEIS1O00470 390 aa9.68□□□□□ -0.86
SYNE1-205ENST00000367251 CLTAP09496 248 aa9.68□□□□□ -0.86
SYNE1-205ENST00000367251 CACNB1Q02641 598 aaPredicted RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms