RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 ADGRG1Q9Y653 693 aa12.93□□□□□ -0.34
CDC42BPA-203ENST00000366766 ZSCAN20P17040 1043 aaPredicted RBP12.93□□□□□ -0.34
CDC42BPA-203ENST00000366766 ARHGEF6Q15052 776 aa12.93□□□□□ -0.34
CDC42BPA-203ENST00000366766 ATP6V0A4Q9HBG4 840 aa12.93□□□□□ -0.34
CDC42BPA-203ENST00000366766 ORC6Q9Y5N6 252 aa12.93□□□□□ -0.34
CDC42BPA-203ENST00000366766 K7ERI5 159 aa12.93□□□□□ -0.34
CDC42BPA-203ENST00000366766 USP17L8P0C7I0 530 aa12.93□□□□□ -0.34
CDC42BPA-203ENST00000366766 ARL4CP56559 192 aa12.93□□□□□ -0.34
CDC42BPA-203ENST00000366766 SSU72P8A0A1W2PR75 194 aa12.93□□□□□ -0.34
CDC42BPA-203ENST00000366766 MOCS3O95396 460 aa12.93□□□□□ -0.34
CDC42BPA-203ENST00000366766 GPC5P78333 572 aa12.93□□□□□ -0.34
CDC42BPA-203ENST00000366766 SLC27A3Q5K4L6 730 aa12.93□□□□□ -0.34
CDC42BPA-203ENST00000366766 BSPRYQ5W0U4 402 aa12.93□□□□□ -0.34
CDC42BPA-203ENST00000366766 SCYL2Q6P3W7 929 aa12.93□□□□□ -0.34
CDC42BPA-203ENST00000366766 RASGRP4Q8TDF6 673 aa12.93□□□□□ -0.34
CDC42BPA-203ENST00000366766 KIF2CQ99661 725 aa12.93□□□□□ -0.34
CDC42BPA-203ENST00000366766 TRIM62Q9BVG3 475 aa12.93□□□□□ -0.34
CDC42BPA-203ENST00000366766 ECE1P42892 770 aa12.92□□□□□ -0.34
CDC42BPA-203ENST00000366766 PRELPP51888 382 aa12.92□□□□□ -0.34
CDC42BPA-203ENST00000366766 STX1BP61266 288 aa12.92□□□□□ -0.34
CDC42BPA-203ENST00000366766 ZNF772Q68DY9 489 aaPredicted RBP12.92□□□□□ -0.34
CDC42BPA-203ENST00000366766 TTBK2Q6IQ55 1244 aa12.92□□□□□ -0.34
CDC42BPA-203ENST00000366766 SCYL3Q8IZE3 742 aa12.92□□□□□ -0.34
CDC42BPA-203ENST00000366766 ADAMTS1Q9UHI8 967 aa12.92□□□□□ -0.34
CDC42BPA-203ENST00000366766 TTLL3Q9Y4R7 772 aa12.92□□□□□ -0.34
CDC42BPA-203ENST00000366766 CD163L1Q9NR16 1453 aa12.92□□□□□ -0.34
CDC42BPA-203ENST00000366766 DIP2BQ9P265 1576 aa12.92□□□□□ -0.34
CDC42BPA-203ENST00000366766 C2orf54Q08AI8 447 aa12.92□□□□□ -0.34
CDC42BPA-203ENST00000366766 KLHL38Q2WGJ6 581 aa12.92□□□□□ -0.34
CDC42BPA-203ENST00000366766 CCDC124Q96CT7 223 aaKnown RBP12.92□□□□□ -0.34
CDC42BPA-203ENST00000366766 OATP04181 439 aa12.92□□□□□ -0.34
CDC42BPA-203ENST00000366766 PPARGP37231 505 aaPredicted RBP12.92□□□□□ -0.34
CDC42BPA-203ENST00000366766 ESRRGP62508 458 aa12.92□□□□□ -0.34
CDC42BPA-203ENST00000366766 RFX6Q8HWS3 928 aa12.92□□□□□ -0.34
CDC42BPA-203ENST00000366766 DDX17Q92841 729 aaKnown RBP12.92□□□□□ -0.34
CDC42BPA-203ENST00000366766 ABCB6Q9NP58 842 aa12.92□□□□□ -0.34
CDC42BPA-203ENST00000366766 MMEL1Q495T6 779 aa12.92□□□□□ -0.34
CDC42BPA-203ENST00000366766 TAF1DQ9H5J8 278 aaPredicted RBP12.92□□□□□ -0.34
CDC42BPA-203ENST00000366766 RBBP5Q15291 538 aaKnown RBP12.92□□□□□ -0.34
CDC42BPA-203ENST00000366766 FAM83BQ5T0W9 1011 aa12.92□□□□□ -0.34
CDC42BPA-203ENST00000366766 NDE1Q9NXR1 346 aa12.92□□□□□ -0.34
CDC42BPA-203ENST00000366766 PPP1R9AQ9ULJ8 1098 aa12.92□□□□□ -0.34
CDC42BPA-203ENST00000366766 OSBPP22059 807 aa12.92□□□□□ -0.34
CDC42BPA-203ENST00000366766 TFDP2Q14188 446 aa12.92□□□□□ -0.34
CDC42BPA-203ENST00000366766 ZDHHC9Q9Y397 364 aa12.92□□□□□ -0.34
CDC42BPA-203ENST00000366766 TMEM131LA2VDJ0 1609 aa12.92□□□□□ -0.34
CDC42BPA-203ENST00000366766 ADGRB1O14514 1584 aa12.92□□□□□ -0.34
CDC42BPA-203ENST00000366766 CFAP73A6NFT4 308 aa12.92□□□□□ -0.34
CDC42BPA-203ENST00000366766 TXNDC9O14530 226 aa12.92□□□□□ -0.34
CDC42BPA-203ENST00000366766 S100BP04271 92 aaPredicted RBP12.92□□□□□ -0.34
CDC42BPA-203ENST00000366766 MMS22LQ6ZRQ5 1243 aa12.92□□□□□ -0.34
CDC42BPA-203ENST00000366766 TMEM47Q9BQJ4 181 aa12.92□□□□□ -0.34
CDC42BPA-203ENST00000366766 BHMT2Q9H2M3 363 aa12.92□□□□□ -0.34
CDC42BPA-203ENST00000366766 AFDNP55196 1824 aaKnown RBP12.92□□□□□ -0.34
CDC42BPA-203ENST00000366766 GPC4O75487 556 aa12.92□□□□□ -0.34
CDC42BPA-203ENST00000366766 ZRANB2O95218 330 aaKnown RBP eCLIP12.92□□□□□ -0.34
CDC42BPA-203ENST00000366766 EDRF1Q3B7T1 1238 aa12.91□□□□□ -0.34
CDC42BPA-203ENST00000366766 LRGUKQ96M69 825 aa12.91□□□□□ -0.34
CDC42BPA-203ENST00000366766 TRIM56Q9BRZ2 755 aaKnown RBP12.91□□□□□ -0.34
CDC42BPA-203ENST00000366766 TMEM60Q9H2L4 133 aa12.91□□□□□ -0.34
CDC42BPA-203ENST00000366766 NRBF2Q96F24 287 aa12.91□□□□□ -0.34
CDC42BPA-203ENST00000366766 MASTLQ96GX5 879 aa12.91□□□□□ -0.34
CDC42BPA-203ENST00000366766 MINPP1Q9UNW1 487 aa12.91□□□□□ -0.34
CDC42BPA-203ENST00000366766 TOGARAM2Q6ZUX3 1019 aa12.91□□□□□ -0.34
CDC42BPA-203ENST00000366766 TMEM35BQ8NCS4 154 aa12.91□□□□□ -0.34
CDC42BPA-203ENST00000366766 PYROXD1Q8WU10 500 aa12.91□□□□□ -0.34
CDC42BPA-203ENST00000366766 FAM8A1Q9UBU6 413 aa12.91□□□□□ -0.34
CDC42BPA-203ENST00000366766 TADA2BQ86TJ2 420 aa12.91□□□□□ -0.34
CDC42BPA-203ENST00000366766 RABEP2Q9H5N1 569 aa12.91□□□□□ -0.34
CDC42BPA-203ENST00000366766 TUFT1Q9NNX1 390 aa12.91□□□□□ -0.34
CDC42BPA-203ENST00000366766 PRCPP42785 496 aa12.91□□□□□ -0.34
CDC42BPA-203ENST00000366766 SCYL1Q96KG9 808 aa12.91□□□□□ -0.34
CDC42BPA-203ENST00000366766 PDXKO00764 312 aa12.91□□□□□ -0.34
CDC42BPA-203ENST00000366766 SERPINB6P35237 376 aa12.91□□□□□ -0.34
CDC42BPA-203ENST00000366766 GCKP35557 465 aa12.91□□□□□ -0.34
CDC42BPA-203ENST00000366766 COG7P83436 770 aa12.91□□□□□ -0.34
CDC42BPA-203ENST00000366766 DDX56Q9NY93 547 aaKnown RBP12.91□□□□□ -0.34
CDC42BPA-203ENST00000366766 TBX3O15119 743 aa12.91□□□□□ -0.34
CDC42BPA-203ENST00000366766 PLEKHA8P1O95397 391 aa12.91□□□□□ -0.34
CDC42BPA-203ENST00000366766 KAZNQ674X7 775 aa12.91□□□□□ -0.34
CDC42BPA-203ENST00000366766 PI16Q6UXB8 463 aa12.91□□□□□ -0.34
CDC42BPA-203ENST00000366766 RFFLQ8WZ73 363 aa12.91□□□□□ -0.34
CDC42BPA-203ENST00000366766 VPS39Q96JC1 886 aa12.91□□□□□ -0.34
CDC42BPA-203ENST00000366766 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.91□□□□□ -0.34
CDC42BPA-203ENST00000366766 LIMA1Q9UHB6 759 aaKnown RBP12.91□□□□□ -0.34
CDC42BPA-203ENST00000366766 SCOCQ9UIL1 159 aa12.91□□□□□ -0.34
CDC42BPA-203ENST00000366766 NFU1Q9UMS0 254 aa12.91□□□□□ -0.34
CDC42BPA-203ENST00000366766 POC1B-GALNT4F8VUJ3 575 aa12.9□□□□□ -0.34
CDC42BPA-203ENST00000366766 INO80B-WBP1J3KQ70 363 aa12.9□□□□□ -0.34
CDC42BPA-203ENST00000366766 TADA3O75528 432 aa12.9□□□□□ -0.34
CDC42BPA-203ENST00000366766 KCNH2Q12809 1159 aa12.9□□□□□ -0.34
CDC42BPA-203ENST00000366766 COASYQ13057 564 aa12.9□□□□□ -0.34
CDC42BPA-203ENST00000366766 PPP2R5DQ14738 602 aa12.9□□□□□ -0.34
CDC42BPA-203ENST00000366766 RASGRP2Q7LDG7 609 aa12.9□□□□□ -0.34
CDC42BPA-203ENST00000366766 METTL23Q86XA0 190 aa12.9□□□□□ -0.34
CDC42BPA-203ENST00000366766 RNF168Q8IYW5 571 aaPredicted RBP12.9□□□□□ -0.34
CDC42BPA-203ENST00000366766 INO80BQ9C086 356 aaPredicted RBP12.9□□□□□ -0.34
CDC42BPA-203ENST00000366766 TCP10L2B9ZVM9 353 aa12.9□□□□□ -0.34
CDC42BPA-203ENST00000366766 LPXNO60711 386 aa12.9□□□□□ -0.34
CDC42BPA-203ENST00000366766 OPHN1O60890 802 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 154.9 ms