RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 ZNF788Q6ZQV5 615 aa0.78□□□□□ -2.28
RNU6-54P-201ENST00000365563 CEP68Q76N32 757 aa0.78□□□□□ -2.28
RNU6-54P-201ENST00000365563 CXXC5Q7LFL8 322 aaKnown RBP0.78□□□□□ -2.28
RNU6-54P-201ENST00000365563 OTOP2Q7RTS6 562 aa0.78□□□□□ -2.28
RNU6-54P-201ENST00000365563 GPRIN1Q7Z2K8 1008 aa0.78□□□□□ -2.28
RNU6-54P-201ENST00000365563 FILIP1Q7Z7B0 1213 aa0.78□□□□□ -2.28
RNU6-54P-201ENST00000365563 PPFIBP1Q86W92 1011 aa0.78□□□□□ -2.28
RNU6-54P-201ENST00000365563 CRACR2BQ8N4Y2 399 aaPredicted RBP0.78□□□□□ -2.28
RNU6-54P-201ENST00000365563 SEMA6DQ8NFY4 1073 aa0.78□□□□□ -2.28
RNU6-54P-201ENST00000365563 WDR48Q8TAF3 677 aa0.78□□□□□ -2.28
RNU6-54P-201ENST00000365563 DENND1AQ8TEH3 1009 aa0.78□□□□□ -2.28
RNU6-54P-201ENST00000365563 RABGGTAQ92696 567 aa0.78□□□□□ -2.28
RNU6-54P-201ENST00000365563 DPF3Q92784 378 aa0.78□□□□□ -2.28
RNU6-54P-201ENST00000365563 PGBD4Q96DM1 585 aa0.78□□□□□ -2.28
RNU6-54P-201ENST00000365563 HMCESQ96FZ2 354 aa0.78□□□□□ -2.28
RNU6-54P-201ENST00000365563 MARK4Q96L34 752 aa0.78□□□□□ -2.28
RNU6-54P-201ENST00000365563 HEPHQ9BQS7 1158 aa0.78□□□□□ -2.28
RNU6-54P-201ENST00000365563 ALOXE3Q9BYJ1 711 aa0.78□□□□□ -2.28
RNU6-54P-201ENST00000365563 EBF3Q9H4W6 596 aa0.78□□□□□ -2.28
RNU6-54P-201ENST00000365563 ANLNQ9NQW6 1124 aa0.78□□□□□ -2.28
RNU6-54P-201ENST00000365563 ANKFY1Q9P2R3 1169 aa0.78□□□□□ -2.28
RNU6-54P-201ENST00000365563 SLC17A6Q9P2U8 582 aa0.78□□□□□ -2.28
RNU6-54P-201ENST00000365563 SFMBT1Q9UHJ3 866 aa0.78□□□□□ -2.28
RNU6-54P-201ENST00000365563 DCTN4Q9UJW0 460 aa0.78□□□□□ -2.28
RNU6-54P-201ENST00000365563 FAM184BQ9ULE4 1060 aa0.78□□□□□ -2.28
RNU6-54P-201ENST00000365563 PROCRQ9UNN8 238 aa0.78□□□□□ -2.28
RNU6-54P-201ENST00000365563 GAGE12BA1L429 117 aa0.77□□□□□ -2.29
RNU6-54P-201ENST00000365563 GAGE12HA6NDE8 117 aa0.77□□□□□ -2.29
RNU6-54P-201ENST00000365563 TMEM88BA6NKF7 163 aa0.77□□□□□ -2.29
RNU6-54P-201ENST00000365563 TMEM200CA6NKL6 621 aa0.77□□□□□ -2.29
RNU6-54P-201ENST00000365563 RNASET2O00584 256 aaKnown RBP0.77□□□□□ -2.29
RNU6-54P-201ENST00000365563 TP73O15350 636 aa0.77□□□□□ -2.29
RNU6-54P-201ENST00000365563 MOSPD3O75425 235 aa0.77□□□□□ -2.29
RNU6-54P-201ENST00000365563 PPM1BO75688 479 aa0.77□□□□□ -2.29
RNU6-54P-201ENST00000365563 TGFB3P10600 412 aa0.77□□□□□ -2.29
RNU6-54P-201ENST00000365563 PLS3P13797 630 aa0.77□□□□□ -2.29
RNU6-54P-201ENST00000365563 FAHP16930 419 aa0.77□□□□□ -2.29
RNU6-54P-201ENST00000365563 GNA15P30679 374 aa0.77□□□□□ -2.29
RNU6-54P-201ENST00000365563 SERPINB4P48594 390 aa0.77□□□□□ -2.29
RNU6-54P-201ENST00000365563 CACNA2D1P54289 1103 aa0.77□□□□□ -2.29
RNU6-54P-201ENST00000365563 GUCY1B3Q02153 619 aa0.77□□□□□ -2.29
RNU6-54P-201ENST00000365563 HGFACQ04756 655 aa0.77□□□□□ -2.29
RNU6-54P-201ENST00000365563 FOXI1Q12951 378 aa0.77□□□□□ -2.29
RNU6-54P-201ENST00000365563 EIF2B5Q13144 721 aaKnown RBP0.77□□□□□ -2.29
RNU6-54P-201ENST00000365563 KCNAB2Q13303 367 aa0.77□□□□□ -2.29
RNU6-54P-201ENST00000365563 EIF4HQ15056 248 aaKnown RBP0.77□□□□□ -2.29
RNU6-54P-201ENST00000365563 ETFDHQ16134 617 aa0.77□□□□□ -2.29
RNU6-54P-201ENST00000365563 BMT2Q1RMZ1 405 aa0.77□□□□□ -2.29
RNU6-54P-201ENST00000365563 ZNF260Q3ZCT1 412 aa0.77□□□□□ -2.29
RNU6-54P-201ENST00000365563 AXDND1Q5T1B0 1012 aaPredicted RBP0.77□□□□□ -2.29
RNU6-54P-201ENST00000365563 PIK3R6Q5UE93 754 aa0.77□□□□□ -2.29
RNU6-54P-201ENST00000365563 GFI1BQ5VTD9 330 aa0.77□□□□□ -2.29
RNU6-54P-201ENST00000365563 MORN5Q5VZ52 161 aa0.77□□□□□ -2.29
RNU6-54P-201ENST00000365563 CD276Q5ZPR3 534 aa0.77□□□□□ -2.29
RNU6-54P-201ENST00000365563 E4F1Q66K89 784 aaPredicted RBP0.77□□□□□ -2.29
RNU6-54P-201ENST00000365563 PHLDB3Q6NSJ2 640 aa0.77□□□□□ -2.29
RNU6-54P-201ENST00000365563 FAM111BQ6SJ93 734 aa0.77□□□□□ -2.29
RNU6-54P-201ENST00000365563 FAM196AQ6ZSG2 479 aa0.77□□□□□ -2.29
RNU6-54P-201ENST00000365563 KIAA0825Q8IV33 1275 aa0.77□□□□□ -2.29
RNU6-54P-201ENST00000365563 LILRA3Q8N6C8 439 aaPredicted RBP0.77□□□□□ -2.29
RNU6-54P-201ENST00000365563 MB21D1Q8N884 522 aa0.77□□□□□ -2.29
RNU6-54P-201ENST00000365563 GOLM1Q8NBJ4 401 aa0.77□□□□□ -2.29
RNU6-54P-201ENST00000365563 ADCY4Q8NFM4 1077 aa0.77□□□□□ -2.29
RNU6-54P-201ENST00000365563 HASPINQ8TF76 798 aa0.77□□□□□ -2.29
RNU6-54P-201ENST00000365563 PPIL4Q8WUA2 492 aaKnown RBP eCLIP0.77□□□□□ -2.29
RNU6-54P-201ENST00000365563 RHOVQ96L33 236 aa0.77□□□□□ -2.29
RNU6-54P-201ENST00000365563 MCMBPQ9BTE3 642 aa0.77□□□□□ -2.29
RNU6-54P-201ENST00000365563 LRRC3Q9BY71 257 aa0.77□□□□□ -2.29
RNU6-54P-201ENST00000365563 EHMT1Q9H9B1 1298 aa0.77□□□□□ -2.29
RNU6-54P-201ENST00000365563 BRMS1Q9HCU9 246 aa0.77□□□□□ -2.29
RNU6-54P-201ENST00000365563 EIF2B4Q9UI10 523 aaKnown RBP0.77□□□□□ -2.29
RNU6-54P-201ENST00000365563 WWC3Q9ULE0 1092 aa0.77□□□□□ -2.29
RNU6-54P-201ENST00000365563 TIMELESSQ9UNS1 1208 aa0.77□□□□□ -2.29
RNU6-54P-201ENST00000365563 ZNF451Q9Y4E5 1061 aa0.77□□□□□ -2.29
RNU6-54P-201ENST00000365563 PIPSLA2A3N6 862 aa0.76□□□□□ -2.29
RNU6-54P-201ENST00000365563 FAM86C2PA6NEL3 165 aa0.76□□□□□ -2.29
RNU6-54P-201ENST00000365563 LRRC3CA6NJW4 275 aa0.76□□□□□ -2.29
RNU6-54P-201ENST00000365563 GRXCR1A8MXD5 290 aa0.76□□□□□ -2.29
RNU6-54P-201ENST00000365563 TLR3O15455 904 aaKnown RBP0.76□□□□□ -2.29
RNU6-54P-201ENST00000365563 ORC4O43929 436 aa0.76□□□□□ -2.29
RNU6-54P-201ENST00000365563 VAMP4O75379 141 aa0.76□□□□□ -2.29
RNU6-54P-201ENST00000365563 PPP1R15AO75807 674 aaPredicted RBP0.76□□□□□ -2.29
RNU6-54P-201ENST00000365563 C1QL1O75973 258 aa0.76□□□□□ -2.29
RNU6-54P-201ENST00000365563 IL18BPO95998 194 aa0.76□□□□□ -2.29
RNU6-54P-201ENST00000365563 TP53P04637 393 aaPredicted RBP0.76□□□□□ -2.29
RNU6-54P-201ENST00000365563 PRKCGP05129 697 aa0.76□□□□□ -2.29
RNU6-54P-201ENST00000365563 HLA-DOAP06340 250 aa0.76□□□□□ -2.29
RNU6-54P-201ENST00000365563 GNAT2P19087 354 aa0.76□□□□□ -2.29
RNU6-54P-201ENST00000365563 MAPK1P28482 360 aa0.76□□□□□ -2.29
RNU6-54P-201ENST00000365563 GBP2P32456 591 aaPredicted RBP0.76□□□□□ -2.29
RNU6-54P-201ENST00000365563 PLA2G5P39877 138 aa0.76□□□□□ -2.29
RNU6-54P-201ENST00000365563 SESN2P58004 480 aaPredicted RBP0.76□□□□□ -2.29
RNU6-54P-201ENST00000365563 GRIN1Q05586 938 aa0.76□□□□□ -2.29
RNU6-54P-201ENST00000365563 FMR1Q06787 632 aaKnown RBP eCLIP0.76□□□□□ -2.29
RNU6-54P-201ENST00000365563 TROAPQ12815 778 aa0.76□□□□□ -2.29
RNU6-54P-201ENST00000365563 SLC10A2Q12908 348 aaPredicted RBP0.76□□□□□ -2.29
RNU6-54P-201ENST00000365563 PAN2Q504Q3 1202 aaKnown RBP0.76□□□□□ -2.29
RNU6-54P-201ENST00000365563 AKNAD1Q5T1N1 836 aa0.76□□□□□ -2.29
RNU6-54P-201ENST00000365563 MBLAC2Q68D91 279 aa0.76□□□□□ -2.29
RNU6-54P-201ENST00000365563 INTS3Q68E01 1043 aaKnown RBP0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms