RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 ELF4Q99607 663 aaPredicted RBP6.62□□□□□ -1.35
RNU4-28P-201ENST00000364739 FEZ1Q99689 392 aa6.62□□□□□ -1.35
RNU4-28P-201ENST00000364739 BTBD2Q9BX70 525 aa6.62□□□□□ -1.35
RNU4-28P-201ENST00000364739 KATNBL1Q9H079 304 aa6.62□□□□□ -1.35
RNU4-28P-201ENST00000364739 JADE2Q9NQC1 790 aa6.62□□□□□ -1.35
RNU4-28P-201ENST00000364739 INTS7Q9NVH2 962 aaKnown RBP6.62□□□□□ -1.35
RNU4-28P-201ENST00000364739 PPP4R1LQ9P1A2 415 aa6.62□□□□□ -1.35
RNU4-28P-201ENST00000364739 ASB1Q9Y576 335 aa6.62□□□□□ -1.35
RNU4-28P-201ENST00000364739 TLDC2A0PJX2 215 aa6.61□□□□□ -1.35
RNU4-28P-201ENST00000364739 H7C1D1 291 aa6.61□□□□□ -1.35
RNU4-28P-201ENST00000364739 PLATP00750 562 aa6.61□□□□□ -1.35
RNU4-28P-201ENST00000364739 POLD1P28340 1107 aa6.61□□□□□ -1.35
RNU4-28P-201ENST00000364739 PPP2CBP62714 309 aa6.61□□□□□ -1.35
RNU4-28P-201ENST00000364739 PPP2CAP67775 309 aa6.61□□□□□ -1.35
RNU4-28P-201ENST00000364739 STILQ15468 1287 aa6.61□□□□□ -1.35
RNU4-28P-201ENST00000364739 KANK2Q63ZY3 851 aa6.61□□□□□ -1.35
RNU4-28P-201ENST00000364739 CREB3L3Q68CJ9 461 aa6.61□□□□□ -1.35
RNU4-28P-201ENST00000364739 LARP4Q71RC2 724 aaKnown RBP eCLIP6.61□□□□□ -1.35
RNU4-28P-201ENST00000364739 OTOP2Q7RTS6 562 aa6.61□□□□□ -1.35
RNU4-28P-201ENST00000364739 KIAA0907Q7Z7F0 614 aaPredicted RBP6.61□□□□□ -1.35
RNU4-28P-201ENST00000364739 WDR48Q8TAF3 677 aa6.61□□□□□ -1.35
RNU4-28P-201ENST00000364739 OR10A5Q9H207 317 aa6.61□□□□□ -1.35
RNU4-28P-201ENST00000364739 PCIF1Q9H4Z3 704 aa6.61□□□□□ -1.35
RNU4-28P-201ENST00000364739 OXSMQ9NWU1 459 aa6.61□□□□□ -1.35
RNU4-28P-201ENST00000364739 LAMTOR5O43504 91 aa6.6□□□□□ -1.35
RNU4-28P-201ENST00000364739 ITGB3P05106 788 aa6.6□□□□□ -1.35
RNU4-28P-201ENST00000364739 RGS3P49796 1198 aa6.6□□□□□ -1.35
RNU4-28P-201ENST00000364739 SLC6A3Q01959 620 aa6.6□□□□□ -1.35
RNU4-28P-201ENST00000364739 MOGSQ13724 837 aa6.6□□□□□ -1.35
RNU4-28P-201ENST00000364739 ZNF174Q15697 407 aa6.6□□□□□ -1.35
RNU4-28P-201ENST00000364739 SEPT7Q16181 437 aaKnown RBP6.6□□□□□ -1.35
RNU4-28P-201ENST00000364739 ERICH6BQ5W0A0 696 aa6.6□□□□□ -1.35
RNU4-28P-201ENST00000364739 ARHGEF18Q6ZSZ5 1173 aa6.6□□□□□ -1.35
RNU4-28P-201ENST00000364739 RALYLQ86SE5 291 aaKnown RBP6.6□□□□□ -1.35
RNU4-28P-201ENST00000364739 CHTF18Q8WVB6 975 aa6.6□□□□□ -1.35
RNU4-28P-201ENST00000364739 CARD11Q9BXL7 1154 aa6.6□□□□□ -1.35
RNU4-28P-201ENST00000364739 IFT57Q9NWB7 429 aa6.6□□□□□ -1.35
RNU4-28P-201ENST00000364739 THG1LQ9NWX6 298 aaKnown RBP6.6□□□□□ -1.35
RNU4-28P-201ENST00000364739 ZKSCAN5Q9Y2L8 839 aa6.6□□□□□ -1.35
RNU4-28P-201ENST00000364739 IGSF3O75054 1194 aa6.59□□□□□ -1.35
RNU4-28P-201ENST00000364739 CNOT4O95628 575 aaKnown RBP6.59□□□□□ -1.35
RNU4-28P-201ENST00000364739 F2P00734 622 aa6.59□□□□□ -1.35
RNU4-28P-201ENST00000364739 STAT5BP51692 787 aa6.59□□□□□ -1.35
RNU4-28P-201ENST00000364739 GYS2P54840 703 aa6.59□□□□□ -1.35
RNU4-28P-201ENST00000364739 KRTAP10-2P60368 255 aa6.59□□□□□ -1.35
RNU4-28P-201ENST00000364739 USP10Q14694 798 aaKnown RBP6.59□□□□□ -1.35
RNU4-28P-201ENST00000364739 TBR1Q16650 682 aa6.59□□□□□ -1.35
RNU4-28P-201ENST00000364739 BORCS6Q96GS4 357 aa6.59□□□□□ -1.35
RNU4-28P-201ENST00000364739 SSBP3Q9BWW4 388 aaPredicted RBP6.59□□□□□ -1.35
RNU4-28P-201ENST00000364739 ZDHHC5Q9C0B5 715 aa6.59□□□□□ -1.35
RNU4-28P-201ENST00000364739 KIAA1683Q9H0B3 1180 aa6.59□□□□□ -1.35
RNU4-28P-201ENST00000364739 ACSS2Q9NR19 701 aa6.59□□□□□ -1.35
RNU4-28P-201ENST00000364739 TOMM22Q9NS69 142 aa6.59□□□□□ -1.35
RNU4-28P-201ENST00000364739 NPEPPSL1A6NEC2 478 aa6.58□□□□□ -1.36
RNU4-28P-201ENST00000364739 K7ESM1 405 aa6.58□□□□□ -1.36
RNU4-28P-201ENST00000364739 ENPP3O14638 875 aa6.58□□□□□ -1.36
RNU4-28P-201ENST00000364739 MYCLP1P12525 358 aaPredicted RBP6.58□□□□□ -1.36
RNU4-28P-201ENST00000364739 POU3F2P20265 443 aaPredicted RBP6.58□□□□□ -1.36
RNU4-28P-201ENST00000364739 ALDH6A1Q02252 535 aaKnown RBP6.58□□□□□ -1.36
RNU4-28P-201ENST00000364739 DSG1Q02413 1049 aa6.58□□□□□ -1.36
RNU4-28P-201ENST00000364739 ESRP1Q6NXG1 681 aaKnown RBP6.58□□□□□ -1.36
RNU4-28P-201ENST00000364739 GLB1LQ6UWU2 654 aa6.58□□□□□ -1.36
RNU4-28P-201ENST00000364739 PRRT2Q7Z6L0 340 aaPredicted RBP6.58□□□□□ -1.36
RNU4-28P-201ENST00000364739 RTF1Q92541 710 aaKnown RBP6.58□□□□□ -1.36
RNU4-28P-201ENST00000364739 MFSD3Q96ES6 412 aa6.58□□□□□ -1.36
RNU4-28P-201ENST00000364739 C16orf92Q96LL3 132 aa6.58□□□□□ -1.36
RNU4-28P-201ENST00000364739 GPR101Q96P66 508 aaPredicted RBP6.58□□□□□ -1.36
RNU4-28P-201ENST00000364739 GNRHR2Q96P88 292 aa6.58□□□□□ -1.36
RNU4-28P-201ENST00000364739 LRRC37BQ96QE4 947 aa6.58□□□□□ -1.36
RNU4-28P-201ENST00000364739 A0A087X0B3 334 aa6.57□□□□□ -1.36
RNU4-28P-201ENST00000364739 A0A0G2JNJ9 132 aa6.57□□□□□ -1.36
RNU4-28P-201ENST00000364739 GPR42O15529 346 aa6.57□□□□□ -1.36
RNU4-28P-201ENST00000364739 GAS7O60861 476 aa6.57□□□□□ -1.36
RNU4-28P-201ENST00000364739 HMGCRP04035 888 aa6.57□□□□□ -1.36
RNU4-28P-201ENST00000364739 APEX1P27695 318 aaKnown RBP6.57□□□□□ -1.36
RNU4-28P-201ENST00000364739 ANTXR2P58335 489 aa6.57□□□□□ -1.36
RNU4-28P-201ENST00000364739 RNF151Q2KHN1 245 aa6.57□□□□□ -1.36
RNU4-28P-201ENST00000364739 CXXC5Q7LFL8 322 aaKnown RBP6.57□□□□□ -1.36
RNU4-28P-201ENST00000364739 PLEKHH3Q7Z736 793 aa6.57□□□□□ -1.36
RNU4-28P-201ENST00000364739 FILIP1Q7Z7B0 1213 aa6.57□□□□□ -1.36
RNU4-28P-201ENST00000364739 CALML6Q8TD86 181 aa6.57□□□□□ -1.36
RNU4-28P-201ENST00000364739 LEO1Q8WVC0 666 aaPredicted RBP6.57□□□□□ -1.36
RNU4-28P-201ENST00000364739 LOXL4Q96JB6 756 aa6.57□□□□□ -1.36
RNU4-28P-201ENST00000364739 TUBGCP5Q96RT8 1024 aa6.57□□□□□ -1.36
RNU4-28P-201ENST00000364739 Q9UFV3 132 aa6.57□□□□□ -1.36
RNU4-28P-201ENST00000364739 ST6GALNAC2Q9UJ37 374 aa6.57□□□□□ -1.36
RNU4-28P-201ENST00000364739 LCHNA4D1U4 455 aa6.56□□□□□ -1.36
RNU4-28P-201ENST00000364739 CUTAO60888 179 aa6.56□□□□□ -1.36
RNU4-28P-201ENST00000364739 PRLP01236 227 aa6.56□□□□□ -1.36
RNU4-28P-201ENST00000364739 CYP17A1P05093 508 aa6.56□□□□□ -1.36
RNU4-28P-201ENST00000364739 ETV4P43268 484 aa6.56□□□□□ -1.36
RNU4-28P-201ENST00000364739 FNTBP49356 437 aa6.56□□□□□ -1.36
RNU4-28P-201ENST00000364739 EPHB4P54760 987 aa6.56□□□□□ -1.36
RNU4-28P-201ENST00000364739 NFKB2Q00653 900 aa6.56□□□□□ -1.36
RNU4-28P-201ENST00000364739 ACAP1Q15027 740 aa6.56□□□□□ -1.36
RNU4-28P-201ENST00000364739 EIF4HQ15056 248 aaKnown RBP6.56□□□□□ -1.36
RNU4-28P-201ENST00000364739 PCOLCEQ15113 449 aa6.56□□□□□ -1.36
RNU4-28P-201ENST00000364739 SURF1Q15526 300 aa6.56□□□□□ -1.36
RNU4-28P-201ENST00000364739 PLEKHG4Q58EX7 1191 aa6.56□□□□□ -1.36
RNU4-28P-201ENST00000364739 GRAMD4Q6IC98 578 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms