RNA–Protein interactions for RNA: ENST00000364005.1

RNU6-340P-201, Transcript of RNA, U6 small nuclear 340, pseudogene, humanhuman

BASIC

Gene RNU6-340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-340P-201ENST00000364005 CLEC1BQ9P126 229 aa0.84□□□□□ -2.27
RNU6-340P-201ENST00000364005 MYOTQ9UBF9 498 aa0.84□□□□□ -2.27
RNU6-340P-201ENST00000364005 SPG7Q9UQ90 795 aa0.84□□□□□ -2.27
RNU6-340P-201ENST00000364005 TBC1D30Q9Y2I9 924 aa0.84□□□□□ -2.27
RNU6-340P-201ENST00000364005 A0A087WZG4 1122 aa0.83□□□□□ -2.28
RNU6-340P-201ENST00000364005 PIPSLA2A3N6 862 aa0.83□□□□□ -2.28
RNU6-340P-201ENST00000364005 FAM86C2PA6NEL3 165 aa0.83□□□□□ -2.28
RNU6-340P-201ENST00000364005 ERI2A8K979 691 aaKnown RBP0.83□□□□□ -2.28
RNU6-340P-201ENST00000364005 F6X3S4 739 aa0.83□□□□□ -2.28
RNU6-340P-201ENST00000364005 MAN2B1O00754 1011 aa0.83□□□□□ -2.28
RNU6-340P-201ENST00000364005 MGST3O14880 152 aa0.83□□□□□ -2.28
RNU6-340P-201ENST00000364005 CLASP2O75122 1294 aaKnown RBP0.83□□□□□ -2.28
RNU6-340P-201ENST00000364005 RECQL4O94761 1208 aa0.83□□□□□ -2.28
RNU6-340P-201ENST00000364005 TP53P04637 393 aaPredicted RBP0.83□□□□□ -2.28
RNU6-340P-201ENST00000364005 PRR35P0CG20 571 aa0.83□□□□□ -2.28
RNU6-340P-201ENST00000364005 PLS3P13797 630 aa0.83□□□□□ -2.28
RNU6-340P-201ENST00000364005 NME1P15531 152 aaKnown RBP0.83□□□□□ -2.28
RNU6-340P-201ENST00000364005 STAT3P40763 770 aa0.83□□□□□ -2.28
RNU6-340P-201ENST00000364005 RARRES1P49788 294 aa0.83□□□□□ -2.28
RNU6-340P-201ENST00000364005 PTTG1IPP53801 180 aa0.83□□□□□ -2.28
RNU6-340P-201ENST00000364005 CACNA2D1P54289 1103 aa0.83□□□□□ -2.28
RNU6-340P-201ENST00000364005 MPP3Q13368 585 aa0.83□□□□□ -2.28
RNU6-340P-201ENST00000364005 MPP2Q14168 576 aa0.83□□□□□ -2.28
RNU6-340P-201ENST00000364005 ZNF169Q14929 603 aaPredicted RBP0.83□□□□□ -2.28
RNU6-340P-201ENST00000364005 EMC4Q5J8M3 183 aa0.83□□□□□ -2.28
RNU6-340P-201ENST00000364005 TRIM68Q6AZZ1 485 aa0.83□□□□□ -2.28
RNU6-340P-201ENST00000364005 DPP8Q6V1X1 898 aaPredicted RBP0.83□□□□□ -2.28
RNU6-340P-201ENST00000364005 PTF1AQ7RTS3 328 aa0.83□□□□□ -2.28
RNU6-340P-201ENST00000364005 ELOA2Q8IYF1 753 aaPredicted RBP0.83□□□□□ -2.28
RNU6-340P-201ENST00000364005 Q8N1Y9 231 aa0.83□□□□□ -2.28
RNU6-340P-201ENST00000364005 VGLL2Q8N8G2 317 aa0.83□□□□□ -2.28
RNU6-340P-201ENST00000364005 SEMA6DQ8NFY4 1073 aa0.83□□□□□ -2.28
RNU6-340P-201ENST00000364005 CLEC4DQ8WXI8 215 aa0.83□□□□□ -2.28
RNU6-340P-201ENST00000364005 RHOVQ96L33 236 aa0.83□□□□□ -2.28
RNU6-340P-201ENST00000364005 CTAGE1Q96RT6 745 aa0.83□□□□□ -2.28
RNU6-340P-201ENST00000364005 BHMT2Q9H2M3 363 aa0.83□□□□□ -2.28
RNU6-340P-201ENST00000364005 SFMBT1Q9UHJ3 866 aa0.83□□□□□ -2.28
RNU6-340P-201ENST00000364005 BTBD3Q9Y2F9 522 aa0.83□□□□□ -2.28
RNU6-340P-201ENST00000364005 COA3Q9Y2R0 106 aaPredicted RBP0.83□□□□□ -2.28
RNU6-340P-201ENST00000364005 MANSC4A6NHS7 340 aaPredicted RBP0.82□□□□□ -2.28
RNU6-340P-201ENST00000364005 ZNF839A8K0R7 811 aa0.82□□□□□ -2.28
RNU6-340P-201ENST00000364005 AHRRA9YTQ3 701 aa0.82□□□□□ -2.28
RNU6-340P-201ENST00000364005 TNFRSF10CO14798 259 aa0.82□□□□□ -2.28
RNU6-340P-201ENST00000364005 PPEF2O14830 753 aa0.82□□□□□ -2.28
RNU6-340P-201ENST00000364005 TBC1D4O60343 1298 aa0.82□□□□□ -2.28
RNU6-340P-201ENST00000364005 PPP1R15AO75807 674 aaPredicted RBP0.82□□□□□ -2.28
RNU6-340P-201ENST00000364005 ITPKBP27987 946 aa0.82□□□□□ -2.28
RNU6-340P-201ENST00000364005 BCL6P41182 706 aa0.82□□□□□ -2.28
RNU6-340P-201ENST00000364005 SERPINB4P48594 390 aa0.82□□□□□ -2.28
RNU6-340P-201ENST00000364005 MEOX1P50221 254 aa0.82□□□□□ -2.28
RNU6-340P-201ENST00000364005 PMS1P54277 932 aaKnown RBP0.82□□□□□ -2.28
RNU6-340P-201ENST00000364005 LINC00205P59089 165 aa0.82□□□□□ -2.28
RNU6-340P-201ENST00000364005 RPL11P62913 178 aaKnown RBP0.82□□□□□ -2.28
RNU6-340P-201ENST00000364005 FAM189BP81408 668 aa0.82□□□□□ -2.28
RNU6-340P-201ENST00000364005 TROAPQ12815 778 aa0.82□□□□□ -2.28
RNU6-340P-201ENST00000364005 WDR72Q3MJ13 1102 aa0.82□□□□□ -2.28
RNU6-340P-201ENST00000364005 CD276Q5ZPR3 534 aa0.82□□□□□ -2.28
RNU6-340P-201ENST00000364005 SLC9A4Q6AI14 798 aa0.82□□□□□ -2.28
RNU6-340P-201ENST00000364005 FAM111BQ6SJ93 734 aa0.82□□□□□ -2.28
RNU6-340P-201ENST00000364005 NLRP10Q86W26 655 aa0.82□□□□□ -2.28
RNU6-340P-201ENST00000364005 PPFIBP1Q86W92 1011 aa0.82□□□□□ -2.28
RNU6-340P-201ENST00000364005 TRIM48Q8IWZ4 208 aa0.82□□□□□ -2.28
RNU6-340P-201ENST00000364005 MB21D1Q8N884 522 aa0.82□□□□□ -2.28
RNU6-340P-201ENST00000364005 ADCY4Q8NFM4 1077 aa0.82□□□□□ -2.28
RNU6-340P-201ENST00000364005 TTLL11Q8NHH1 800 aa0.82□□□□□ -2.28
RNU6-340P-201ENST00000364005 PHOSPHO1Q8TCT1 267 aa0.82□□□□□ -2.28
RNU6-340P-201ENST00000364005 PPIL4Q8WUA2 492 aaKnown RBP eCLIP0.82□□□□□ -2.28
RNU6-340P-201ENST00000364005 RABGGTAQ92696 567 aa0.82□□□□□ -2.28
RNU6-340P-201ENST00000364005 TMEM169Q96HH4 297 aa0.82□□□□□ -2.28
RNU6-340P-201ENST00000364005 TRMOQ9BU70 441 aa0.82□□□□□ -2.28
RNU6-340P-201ENST00000364005 SLC46A2Q9BY10 475 aa0.82□□□□□ -2.28
RNU6-340P-201ENST00000364005 SMOC1Q9H4F8 434 aa0.82□□□□□ -2.28
RNU6-340P-201ENST00000364005 GPRC5CQ9NQ84 441 aa0.82□□□□□ -2.28
RNU6-340P-201ENST00000364005 IGSF5Q9NSI5 407 aa0.82□□□□□ -2.28
RNU6-340P-201ENST00000364005 FAM86C1Q9NVL1 165 aa0.82□□□□□ -2.28
RNU6-340P-201ENST00000364005 ARPP21Q9UBL0 812 aaPredicted RBP0.82□□□□□ -2.28
RNU6-340P-201ENST00000364005 CDC42EP3Q9UKI2 254 aa0.82□□□□□ -2.28
RNU6-340P-201ENST00000364005 WWC3Q9ULE0 1092 aa0.82□□□□□ -2.28
RNU6-340P-201ENST00000364005 FAM184BQ9ULE4 1060 aa0.82□□□□□ -2.28
RNU6-340P-201ENST00000364005 TIMELESSQ9UNS1 1208 aa0.82□□□□□ -2.28
RNU6-340P-201ENST00000364005 TIMM13Q9Y5L4 95 aaPredicted RBP0.82□□□□□ -2.28
RNU6-340P-201ENST00000364005 MMP24Q9Y5R2 645 aa0.82□□□□□ -2.28
RNU6-340P-201ENST00000364005 TMEM88BA6NKF7 163 aa0.81□□□□□ -2.28
RNU6-340P-201ENST00000364005 WNT9AO14904 365 aa0.81□□□□□ -2.28
RNU6-340P-201ENST00000364005 TRIM24O15164 1050 aa0.81□□□□□ -2.28
RNU6-340P-201ENST00000364005 TLR3O15455 904 aaKnown RBP0.81□□□□□ -2.28
RNU6-340P-201ENST00000364005 TREHO43280 583 aa0.81□□□□□ -2.28
RNU6-340P-201ENST00000364005 NDUFA10O95299 355 aa0.81□□□□□ -2.28
RNU6-340P-201ENST00000364005 CGAP01215 116 aa0.81□□□□□ -2.28
RNU6-340P-201ENST00000364005 GYPEP15421 78 aa0.81□□□□□ -2.28
RNU6-340P-201ENST00000364005 FAHP16930 419 aa0.81□□□□□ -2.28
RNU6-340P-201ENST00000364005 KELP23276 732 aa0.81□□□□□ -2.28
RNU6-340P-201ENST00000364005 ADCY8P40145 1251 aa0.81□□□□□ -2.28
RNU6-340P-201ENST00000364005 NR4A2P43354 598 aa0.81□□□□□ -2.28
RNU6-340P-201ENST00000364005 AMPD2Q01433 879 aa0.81□□□□□ -2.28
RNU6-340P-201ENST00000364005 ACAP1Q15027 740 aa0.81□□□□□ -2.28
RNU6-340P-201ENST00000364005 EIF4HQ15056 248 aaKnown RBP0.81□□□□□ -2.28
RNU6-340P-201ENST00000364005 PAN2Q504Q3 1202 aaKnown RBP0.81□□□□□ -2.28
RNU6-340P-201ENST00000364005 ABHD17BQ5VST6 288 aa0.81□□□□□ -2.28
RNU6-340P-201ENST00000364005 NAIF1Q69YI7 327 aaPredicted RBP0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms