RNA–Protein interactions for RNA: ENST00000363399.1

RNU6-838P-201, Transcript of RNA, U6 small nuclear 838, pseudogene, humanhuman

BASIC

Gene RNU6-838P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-838P-201ENST00000363399 CBX8Q9HC52 389 aa-0.64□□□□□ -2.51
RNU6-838P-201ENST00000363399 CPNE5Q9HCH3 593 aa-0.64□□□□□ -2.51
RNU6-838P-201ENST00000363399 PRR34Q9NV39 138 aa-0.64□□□□□ -2.51
RNU6-838P-201ENST00000363399 TMEM39AQ9NV64 488 aa-0.64□□□□□ -2.51
RNU6-838P-201ENST00000363399 RWDD3Q9Y3V2 267 aa-0.64□□□□□ -2.51
RNU6-838P-201ENST00000363399 PCDHB5Q9Y5E4 795 aa-0.64□□□□□ -2.51
RNU6-838P-201ENST00000363399 MEGF8Q7Z7M0 2845 aa-0.65□□□□□ -2.51
RNU6-838P-201ENST00000363399 ZBTB7CA1YPR0 619 aa-0.65□□□□□ -2.51
RNU6-838P-201ENST00000363399 KCNU1A8MYU2 1149 aa-0.65□□□□□ -2.51
RNU6-838P-201ENST00000363399 MAN2B1O00754 1011 aa-0.65□□□□□ -2.51
RNU6-838P-201ENST00000363399 ACOT8O14734 319 aa-0.65□□□□□ -2.51
RNU6-838P-201ENST00000363399 SGSM2O43147 1006 aa-0.65□□□□□ -2.51
RNU6-838P-201ENST00000363399 PRPH2P23942 346 aa-0.65□□□□□ -2.51
RNU6-838P-201ENST00000363399 GRK4P32298 578 aa-0.65□□□□□ -2.51
RNU6-838P-201ENST00000363399 ATP1A2P50993 1020 aa-0.65□□□□□ -2.51
RNU6-838P-201ENST00000363399 GAS1P54826 345 aa-0.65□□□□□ -2.51
RNU6-838P-201ENST00000363399 SMAD3P84022 425 aaKnown RBP-0.65□□□□□ -2.51
RNU6-838P-201ENST00000363399 SMAD2Q15796 467 aaKnown RBP-0.65□□□□□ -2.51
RNU6-838P-201ENST00000363399 KRTAP13-4Q3LI77 160 aa-0.65□□□□□ -2.51
RNU6-838P-201ENST00000363399 TMEM119Q4V9L6 283 aa-0.65□□□□□ -2.51
RNU6-838P-201ENST00000363399 ZMAT1Q5H9K5 638 aa-0.65□□□□□ -2.51
RNU6-838P-201ENST00000363399 RTP2Q5QGT7 225 aa-0.65□□□□□ -2.51
RNU6-838P-201ENST00000363399 PIK3R6Q5UE93 754 aa-0.65□□□□□ -2.51
RNU6-838P-201ENST00000363399 E4F1Q66K89 784 aaPredicted RBP-0.65□□□□□ -2.51
RNU6-838P-201ENST00000363399 TMC5Q6UXY8 1006 aa-0.65□□□□□ -2.51
RNU6-838P-201ENST00000363399 TMEM192Q8IY95 271 aa-0.65□□□□□ -2.51
RNU6-838P-201ENST00000363399 SIX5Q8N196 739 aa-0.65□□□□□ -2.51
RNU6-838P-201ENST00000363399 LARGE2Q8N3Y3 721 aa-0.65□□□□□ -2.51
RNU6-838P-201ENST00000363399 FBXL16Q8N461 479 aa-0.65□□□□□ -2.51
RNU6-838P-201ENST00000363399 OGFOD1Q8N543 542 aa-0.65□□□□□ -2.51
RNU6-838P-201ENST00000363399 NAT16Q8N8M0 369 aa-0.65□□□□□ -2.51
RNU6-838P-201ENST00000363399 SHCBP1Q8NEM2 672 aa-0.65□□□□□ -2.51
RNU6-838P-201ENST00000363399 SARAFQ96BY9 339 aa-0.65□□□□□ -2.51
RNU6-838P-201ENST00000363399 PLPPR2Q96GM1 343 aa-0.65□□□□□ -2.51
RNU6-838P-201ENST00000363399 PDLIM2Q96JY6 352 aa-0.65□□□□□ -2.51
RNU6-838P-201ENST00000363399 ZNF512Q96ME7 567 aaPredicted RBP-0.65□□□□□ -2.51
RNU6-838P-201ENST00000363399 FAM193BQ96PV7 902 aaPredicted RBP-0.65□□□□□ -2.51
RNU6-838P-201ENST00000363399 ZNF347Q96SE7 839 aa-0.65□□□□□ -2.51
RNU6-838P-201ENST00000363399 C12orf49Q9H741 205 aa-0.65□□□□□ -2.51
RNU6-838P-201ENST00000363399 MSL2Q9HCI7 577 aa-0.65□□□□□ -2.51
RNU6-838P-201ENST00000363399 ASH2LQ9UBL3 628 aa-0.65□□□□□ -2.51
RNU6-838P-201ENST00000363399 FOXD3Q9UJU5 478 aaPredicted RBP-0.65□□□□□ -2.51
RNU6-838P-201ENST00000363399 CROCCQ5TZA2 2017 aa-0.65□□□□□ -2.51
RNU6-838P-201ENST00000363399 FAT4Q6V0I7 4981 aa-0.66□□□□□ -2.51
RNU6-838P-201ENST00000363399 PMS2P1A4D2B8 440 aa-0.66□□□□□ -2.52
RNU6-838P-201ENST00000363399 PALM3A6NDB9 673 aaPredicted RBP-0.66□□□□□ -2.52
RNU6-838P-201ENST00000363399 GOLGA6L6A8MZA4 724 aa-0.66□□□□□ -2.52
RNU6-838P-201ENST00000363399 AHRRA9YTQ3 701 aa-0.66□□□□□ -2.52
RNU6-838P-201ENST00000363399 TCP11X1B4DZS4 312 aa-0.66□□□□□ -2.52
RNU6-838P-201ENST00000363399 TNFRSF10BO14763 440 aa-0.66□□□□□ -2.52
RNU6-838P-201ENST00000363399 PPP1R11O60927 126 aaPredicted RBP-0.66□□□□□ -2.52
RNU6-838P-201ENST00000363399 LDB3O75112 727 aa-0.66□□□□□ -2.52
RNU6-838P-201ENST00000363399 NDUFA10O95299 355 aa-0.66□□□□□ -2.52
RNU6-838P-201ENST00000363399 PRAMEF1O95521 474 aa-0.66□□□□□ -2.52
RNU6-838P-201ENST00000363399 NGFRP08138 427 aa-0.66□□□□□ -2.52
RNU6-838P-201ENST00000363399 EGR2P11161 476 aaPredicted RBP-0.66□□□□□ -2.52
RNU6-838P-201ENST00000363399 ENDOUP21128 410 aaKnown RBP-0.66□□□□□ -2.52
RNU6-838P-201ENST00000363399 IL6STP40189 918 aaPredicted RBP-0.66□□□□□ -2.52
RNU6-838P-201ENST00000363399 MLLT10P55197 1068 aa-0.66□□□□□ -2.52
RNU6-838P-201ENST00000363399 SNW1Q13573 536 aaKnown RBP-0.66□□□□□ -2.52
RNU6-838P-201ENST00000363399 TP53BP2Q13625 1128 aa-0.66□□□□□ -2.52
RNU6-838P-201ENST00000363399 TWIST1Q15672 202 aa-0.66□□□□□ -2.52
RNU6-838P-201ENST00000363399 ELAVL1Q15717 326 aaKnown RBP-0.66□□□□□ -2.52
RNU6-838P-201ENST00000363399 FAM76BQ5HYJ3 339 aa-0.66□□□□□ -2.52
RNU6-838P-201ENST00000363399 RPS26P11Q5JNZ5 115 aaPredicted RBP-0.66□□□□□ -2.52
RNU6-838P-201ENST00000363399 AMER1Q5JTC6 1135 aaPredicted RBP-0.66□□□□□ -2.52
RNU6-838P-201ENST00000363399 CEP78Q5JTW2 689 aa-0.66□□□□□ -2.52
RNU6-838P-201ENST00000363399 ABHD17BQ5VST6 288 aa-0.66□□□□□ -2.52
RNU6-838P-201ENST00000363399 WWC2Q6AWC2 1192 aa-0.66□□□□□ -2.52
RNU6-838P-201ENST00000363399 HTR3DQ70Z44 454 aa-0.66□□□□□ -2.52
RNU6-838P-201ENST00000363399 RSRC2Q7L4I2 434 aaKnown RBP-0.66□□□□□ -2.52
RNU6-838P-201ENST00000363399 MRPL41Q8IXM3 137 aaKnown RBP-0.66□□□□□ -2.52
RNU6-838P-201ENST00000363399 PELI3Q8N2H9 469 aa-0.66□□□□□ -2.52
RNU6-838P-201ENST00000363399 FNBP4Q8N3X1 1017 aaPredicted RBP-0.66□□□□□ -2.52
RNU6-838P-201ENST00000363399 CLP1Q92989 425 aaKnown RBP-0.66□□□□□ -2.52
RNU6-838P-201ENST00000363399 NGRNQ9NPE2 291 aaKnown RBP-0.66□□□□□ -2.52
RNU6-838P-201ENST00000363399 ABCB10Q9NRK6 738 aa-0.66□□□□□ -2.52
RNU6-838P-201ENST00000363399 SFMBT1Q9UHJ3 866 aa-0.66□□□□□ -2.52
RNU6-838P-201ENST00000363399 GPN3Q9UHW5 284 aaPredicted RBP-0.66□□□□□ -2.52
RNU6-838P-201ENST00000363399 NOVA2Q9UNW9 492 aaKnown RBP-0.66□□□□□ -2.52
RNU6-838P-201ENST00000363399 AMOTL2Q9Y2J4 779 aa-0.66□□□□□ -2.52
RNU6-838P-201ENST00000363399 RUSC2Q8N2Y8 1516 aa-0.66□□□□□ -2.52
RNU6-838P-201ENST00000363399 H3BNX3 289 aa-0.67□□□□□ -2.52
RNU6-838P-201ENST00000363399 MEIS1O00470 390 aa-0.67□□□□□ -2.52
RNU6-838P-201ENST00000363399 FOXO3O43524 673 aa-0.67□□□□□ -2.52
RNU6-838P-201ENST00000363399 ZG16O60844 167 aa-0.67□□□□□ -2.52
RNU6-838P-201ENST00000363399 TNFRSF21O75509 655 aa-0.67□□□□□ -2.52
RNU6-838P-201ENST00000363399 NTRK1P04629 796 aa-0.67□□□□□ -2.52
RNU6-838P-201ENST00000363399 VAV1P15498 845 aa-0.67□□□□□ -2.52
RNU6-838P-201ENST00000363399 GPD1P21695 349 aa-0.67□□□□□ -2.52
RNU6-838P-201ENST00000363399 CDK8P49336 464 aa-0.67□□□□□ -2.52
RNU6-838P-201ENST00000363399 FXR1P51114 621 aaKnown RBP eCLIP-0.67□□□□□ -2.52
RNU6-838P-201ENST00000363399 HTRA4P83105 476 aaPredicted RBP-0.67□□□□□ -2.52
RNU6-838P-201ENST00000363399 CAPRIN1Q14444 709 aaKnown RBP-0.67□□□□□ -2.52
RNU6-838P-201ENST00000363399 SKIV2LQ15477 1246 aaKnown RBP-0.67□□□□□ -2.52
RNU6-838P-201ENST00000363399 TRIM71Q2Q1W2 868 aaKnown RBP-0.67□□□□□ -2.52
RNU6-838P-201ENST00000363399 C8orf34Q49A92 452 aa-0.67□□□□□ -2.52
RNU6-838P-201ENST00000363399 ZNF484Q5JVG2 852 aa-0.67□□□□□ -2.52
RNU6-838P-201ENST00000363399 LVRNQ6Q4G3 990 aa-0.67□□□□□ -2.52
RNU6-838P-201ENST00000363399 AMIGO2Q86SJ2 522 aa-0.67□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms