RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 MED14O60244 1454 aa20.06■□□□□ 0.8
CLIP2-202ENST00000361545 NR3C1P04150 777 aa20.05■□□□□ 0.8
CLIP2-202ENST00000361545 CDC25BP30305 580 aa20.05■□□□□ 0.8
CLIP2-202ENST00000361545 ERICH1Q86X53 443 aa20.05■□□□□ 0.8
CLIP2-202ENST00000361545 MTA3Q9BTC8 594 aa20.05■□□□□ 0.8
CLIP2-202ENST00000361545 HACL1Q9UJ83 578 aa20.05■□□□□ 0.8
CLIP2-202ENST00000361545 PDE1BQ01064 536 aa20.05■□□□□ 0.8
CLIP2-202ENST00000361545 RSBN1LQ6PCB5 846 aaPredicted RBP20.05■□□□□ 0.8
CLIP2-202ENST00000361545 CYFIP1Q7L576 1253 aa20.05■□□□□ 0.8
CLIP2-202ENST00000361545 DCLK2Q8N568 766 aa20.05■□□□□ 0.8
CLIP2-202ENST00000361545 DARS2Q6PI48 645 aaKnown RBP20.05■□□□□ 0.8
CLIP2-202ENST00000361545 TAF1CQ15572 869 aaPredicted RBP20.05■□□□□ 0.8
CLIP2-202ENST00000361545 GCNAQ96QF7 691 aa20.05■□□□□ 0.8
CLIP2-202ENST00000361545 RNF40O75150 1001 aa20.05■□□□□ 0.8
CLIP2-202ENST00000361545 ATP1A2P50993 1020 aa20.05■□□□□ 0.8
CLIP2-202ENST00000361545 COASYQ13057 564 aa20.05■□□□□ 0.8
CLIP2-202ENST00000361545 DEFB132Q7Z7B7 95 aa20.05■□□□□ 0.8
CLIP2-202ENST00000361545 HOMER3Q9NSC5 361 aa20.05■□□□□ 0.8
CLIP2-202ENST00000361545 BCORL1Q5H9F3 1711 aa20.04■□□□□ 0.8
CLIP2-202ENST00000361545 SRGAP2BP0DMP2 458 aa20.04■□□□□ 0.8
CLIP2-202ENST00000361545 COG2Q14746 738 aa20.04■□□□□ 0.8
CLIP2-202ENST00000361545 MB21D1Q8N884 522 aa20.04■□□□□ 0.8
CLIP2-202ENST00000361545 NGRNQ9NPE2 291 aaKnown RBP20.04■□□□□ 0.8
CLIP2-202ENST00000361545 MTMR4Q9NYA4 1195 aa20.04■□□□□ 0.8
CLIP2-202ENST00000361545 A6NNZ2 444 aa20.04■□□□□ 0.8
CLIP2-202ENST00000361545 CSF1RP07333 972 aa20.04■□□□□ 0.8
CLIP2-202ENST00000361545 GMPSP49915 693 aaPredicted RBP20.04■□□□□ 0.8
CLIP2-202ENST00000361545 BASP1P80723 227 aaKnown RBP20.04■□□□□ 0.8
CLIP2-202ENST00000361545 TUBB8Q3ZCM7 444 aa20.04■□□□□ 0.8
CLIP2-202ENST00000361545 PPP1R2P3Q6NXS1 205 aa20.04■□□□□ 0.8
CLIP2-202ENST00000361545 VSTM4Q8IW00 320 aa20.04■□□□□ 0.8
CLIP2-202ENST00000361545 SRBD1Q8N5C6 995 aaKnown RBP20.04■□□□□ 0.8
CLIP2-202ENST00000361545 POLR3FQ9H1D9 316 aaPredicted RBP20.04■□□□□ 0.8
CLIP2-202ENST00000361545 TECPR2O15040 1411 aa20.04■□□□□ 0.8
CLIP2-202ENST00000361545 PSMC5P62195 406 aa20.04■□□□□ 0.8
CLIP2-202ENST00000361545 ATP11AP98196 1134 aa20.04■□□□□ 0.8
CLIP2-202ENST00000361545 DNAJC12Q9UKB3 198 aa20.04■□□□□ 0.8
CLIP2-202ENST00000361545 TROVE2P10155 538 aaKnown RBP eCLIP20.04■□□□□ 0.8
CLIP2-202ENST00000361545 TNFAIP2Q03169 654 aa20.04■□□□□ 0.8
CLIP2-202ENST00000361545 STOX1Q6ZVD7 989 aa20.04■□□□□ 0.8
CLIP2-202ENST00000361545 SCN4BQ8IWT1 228 aa20.04■□□□□ 0.8
CLIP2-202ENST00000361545 C10orf67Q8IYJ2 551 aa20.04■□□□□ 0.8
CLIP2-202ENST00000361545 CDC23Q9UJX2 597 aa20.04■□□□□ 0.8
CLIP2-202ENST00000361545 DIP2CQ9Y2E4 1556 aa20.03■□□□□ 0.8
CLIP2-202ENST00000361545 GUCY1A2P33402 732 aa20.03■□□□□ 0.8
CLIP2-202ENST00000361545 ZNF157P51786 506 aaPredicted RBP20.03■□□□□ 0.8
CLIP2-202ENST00000361545 MCUQ8NE86 351 aa20.03■□□□□ 0.8
CLIP2-202ENST00000361545 ZMYND10O75800 440 aa20.03■□□□□ 0.8
CLIP2-202ENST00000361545 ATXN8OSP0DMR3 200 aa20.03■□□□□ 0.8
CLIP2-202ENST00000361545 FDX1P10109 184 aa20.03■□□□□ 0.8
CLIP2-202ENST00000361545 ZNF699Q32M78 642 aa20.03■□□□□ 0.8
CLIP2-202ENST00000361545 ARHGEF18Q6ZSZ5 1173 aa20.03■□□□□ 0.8
CLIP2-202ENST00000361545 ZWILCHQ9H900 591 aa20.03■□□□□ 0.8
CLIP2-202ENST00000361545 DAAM1Q9Y4D1 1078 aa20.03■□□□□ 0.8
CLIP2-202ENST00000361545 SLC15A2Q16348 729 aa20.03■□□□□ 0.8
CLIP2-202ENST00000361545 RAPH1Q70E73 1250 aa20.03■□□□□ 0.8
CLIP2-202ENST00000361545 SGMS1Q86VZ5 419 aa20.03■□□□□ 0.8
CLIP2-202ENST00000361545 RAET1EQ8TD07 263 aa20.03■□□□□ 0.8
CLIP2-202ENST00000361545 BCL2L12Q9HB09 334 aa20.03■□□□□ 0.8
CLIP2-202ENST00000361545 TXNP10599 105 aaKnown RBP20.03■□□□□ 0.8
CLIP2-202ENST00000361545 TRIP13Q15645 432 aaPredicted RBP20.03■□□□□ 0.8
CLIP2-202ENST00000361545 PCDHA13Q9Y5I0 950 aa20.03■□□□□ 0.8
CLIP2-202ENST00000361545 PGRMC1O00264 195 aaKnown RBP20.02■□□□□ 0.8
CLIP2-202ENST00000361545 NDUFB10O96000 172 aa20.02■□□□□ 0.8
CLIP2-202ENST00000361545 INHBAP08476 426 aa20.02■□□□□ 0.8
CLIP2-202ENST00000361545 GARSP41250 739 aaKnown RBP20.02■□□□□ 0.8
CLIP2-202ENST00000361545 CYP4F22Q6NT55 531 aa20.02■□□□□ 0.8
CLIP2-202ENST00000361545 ALKBH5Q6P6C2 394 aaKnown RBP20.02■□□□□ 0.8
CLIP2-202ENST00000361545 THEM5Q8N1Q8 247 aa20.02■□□□□ 0.8
CLIP2-202ENST00000361545 CD163L1Q9NR16 1453 aa20.02■□□□□ 0.8
CLIP2-202ENST00000361545 SETBP1Q9Y6X0 1596 aa20.02■□□□□ 0.8
CLIP2-202ENST00000361545 ASB14A6NK59 587 aa20.02■□□□□ 0.8
CLIP2-202ENST00000361545 GRIN3BO60391 1043 aa20.02■□□□□ 0.8
CLIP2-202ENST00000361545 HUS1O60921 280 aa20.02■□□□□ 0.8
CLIP2-202ENST00000361545 SAMD7Q7Z3H4 446 aa20.02■□□□□ 0.8
CLIP2-202ENST00000361545 PASD1Q8IV76 773 aa20.02■□□□□ 0.8
CLIP2-202ENST00000361545 ZNF579Q8NAF0 562 aaKnown RBP20.02■□□□□ 0.8
CLIP2-202ENST00000361545 PLTPP55058 493 aa20.02■□□□□ 0.8
CLIP2-202ENST00000361545 NEK9Q8TD19 979 aa20.02■□□□□ 0.8
CLIP2-202ENST00000361545 EIF2AK1Q9BQI3 630 aaKnown RBP20.02■□□□□ 0.8
CLIP2-202ENST00000361545 RWDD4Q6NW29 188 aaKnown RBP20.02■□□□□ 0.79
CLIP2-202ENST00000361545 PPRC1Q5VV67 1664 aaKnown RBP20.02■□□□□ 0.79
CLIP2-202ENST00000361545 IQSEC2Q5JU85 1478 aa20.01■□□□□ 0.79
CLIP2-202ENST00000361545 NDUFA10O95299 355 aa20.01■□□□□ 0.79
CLIP2-202ENST00000361545 PNMA8AQ86V59 439 aaPredicted RBP20.01■□□□□ 0.79
CLIP2-202ENST00000361545 ZNF280CQ8ND82 737 aa20.01■□□□□ 0.79
CLIP2-202ENST00000361545 HSPH1Q92598 858 aa20.01■□□□□ 0.79
CLIP2-202ENST00000361545 SLC9A2Q9UBY0 812 aa20.01■□□□□ 0.79
CLIP2-202ENST00000361545 NEXMIFQ5QGS0 1516 aa20.01■□□□□ 0.79
CLIP2-202ENST00000361545 PTPRUQ92729 1446 aa20.01■□□□□ 0.79
CLIP2-202ENST00000361545 EIF3CLB5ME19 914 aaKnown RBP20.01■□□□□ 0.79
CLIP2-202ENST00000361545 ECEL1O95672 775 aa20.01■□□□□ 0.79
CLIP2-202ENST00000361545 PRCPP42785 496 aa20.01■□□□□ 0.79
CLIP2-202ENST00000361545 GPC3P51654 580 aa20.01■□□□□ 0.79
CLIP2-202ENST00000361545 SAAL1Q96ER3 474 aa20.01■□□□□ 0.79
CLIP2-202ENST00000361545 EIF3CQ99613 913 aaKnown RBP20.01■□□□□ 0.79
CLIP2-202ENST00000361545 GOLPH3LQ9H4A5 285 aa20.01■□□□□ 0.79
CLIP2-202ENST00000361545 PTPRMP28827 1452 aa20.01■□□□□ 0.79
CLIP2-202ENST00000361545 ADCY1Q08828 1119 aa20.01■□□□□ 0.79
CLIP2-202ENST00000361545 TMEM270Q6UE05 265 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms