RNA–Protein interactions for RNA: ENST00000361354.8

NCKAP1-202, Transcript of NCK associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCKAP1, Length 20,347 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-202ENST00000361354 HPS5Q9UPZ3 1129 aa8.97□□□□□ -0.97
NCKAP1-202ENST00000361354 LRRIQ3A6PVS8 624 aaPredicted RBP8.96□□□□□ -0.97
NCKAP1-202ENST00000361354 ANGPT2O15123 496 aa8.96□□□□□ -0.97
NCKAP1-202ENST00000361354 TJP3O95049 919 aa8.96□□□□□ -0.97
NCKAP1-202ENST00000361354 SPATA1Q5VX52 437 aa8.96□□□□□ -0.97
NCKAP1-202ENST00000361354 MICALL2Q8IY33 904 aa8.96□□□□□ -0.97
NCKAP1-202ENST00000361354 UBE2OQ9C0C9 1292 aaKnown RBP8.96□□□□□ -0.97
NCKAP1-202ENST00000361354 SPRTNQ9H040 489 aaPredicted RBP8.96□□□□□ -0.97
NCKAP1-202ENST00000361354 SAP30BPQ9UHR5 308 aaKnown RBP8.96□□□□□ -0.97
NCKAP1-202ENST00000361354 DIDO1Q9BTC0 2240 aaKnown RBP8.96□□□□□ -0.97
NCKAP1-202ENST00000361354 SYCP2Q9BX26 1530 aa8.96□□□□□ -0.97
NCKAP1-202ENST00000361354 MAP3K13O43283 966 aa8.96□□□□□ -0.97
NCKAP1-202ENST00000361354 GPAA1O43292 621 aa8.96□□□□□ -0.97
NCKAP1-202ENST00000361354 PNMA6AP0CW24 399 aaPredicted RBP8.96□□□□□ -0.97
NCKAP1-202ENST00000361354 SMARCAD1Q9H4L7 1026 aa8.96□□□□□ -0.97
NCKAP1-202ENST00000361354 SCAF11Q99590 1463 aaKnown RBP8.96□□□□□ -0.97
NCKAP1-202ENST00000361354 FAM83GA6ND36 823 aa8.96□□□□□ -0.97
NCKAP1-202ENST00000361354 ZMYND10O75800 440 aa8.96□□□□□ -0.97
NCKAP1-202ENST00000361354 TFDP1Q14186 410 aa8.96□□□□□ -0.97
NCKAP1-202ENST00000361354 GALNT17Q6IS24 598 aa8.96□□□□□ -0.97
NCKAP1-202ENST00000361354 ANKRD49Q8WVL7 239 aa8.96□□□□□ -0.97
NCKAP1-202ENST00000361354 CCDC134Q9H6E4 229 aa8.96□□□□□ -0.97
NCKAP1-202ENST00000361354 MYH7P12883 1935 aa8.96□□□□□ -0.97
NCKAP1-202ENST00000361354 PDE5AO76074 875 aa8.96□□□□□ -0.97
NCKAP1-202ENST00000361354 HSPA13P48723 471 aa8.96□□□□□ -0.97
NCKAP1-202ENST00000361354 LRRIQ4A6NIV6 560 aa8.96□□□□□ -0.97
NCKAP1-202ENST00000361354 CTTNQ14247 550 aaKnown RBP8.96□□□□□ -0.97
NCKAP1-202ENST00000361354 AATFQ9NY61 560 aaKnown RBP eCLIP8.96□□□□□ -0.97
NCKAP1-202ENST00000361354 ADAM30Q9UKF2 790 aa8.96□□□□□ -0.97
NCKAP1-202ENST00000361354 SEC24DO94855 1032 aaPredicted RBP8.96□□□□□ -0.97
NCKAP1-202ENST00000361354 KLHL12Q53G59 568 aa8.96□□□□□ -0.97
NCKAP1-202ENST00000361354 SIX6OS1Q8N1H7 587 aa8.96□□□□□ -0.97
NCKAP1-202ENST00000361354 STRNO43815 780 aa8.96□□□□□ -0.98
NCKAP1-202ENST00000361354 RGS20O76081 388 aa8.96□□□□□ -0.98
NCKAP1-202ENST00000361354 VIPAS39Q9H9C1 493 aa8.96□□□□□ -0.98
NCKAP1-202ENST00000361354 DIS3Q9Y2L1 958 aaKnown RBP8.96□□□□□ -0.98
NCKAP1-202ENST00000361354 ANXA13P27216 316 aa8.96□□□□□ -0.98
NCKAP1-202ENST00000361354 TFCP2Q12800 502 aa8.96□□□□□ -0.98
NCKAP1-202ENST00000361354 STXBP2Q15833 593 aa8.96□□□□□ -0.98
NCKAP1-202ENST00000361354 KIRREL3Q8IZU9 778 aa8.96□□□□□ -0.98
NCKAP1-202ENST00000361354 SCN3BQ9NY72 215 aa8.96□□□□□ -0.98
NCKAP1-202ENST00000361354 CCDC195A0A1B0GUA6 201 aa8.96□□□□□ -0.98
NCKAP1-202ENST00000361354 CFBP00751 764 aa8.96□□□□□ -0.98
NCKAP1-202ENST00000361354 OR52Z1P0C646 297 aa8.96□□□□□ -0.98
NCKAP1-202ENST00000361354 KIAA1755Q5JYT7 1200 aa8.96□□□□□ -0.98
NCKAP1-202ENST00000361354 COG1Q8WTW3 980 aa8.96□□□□□ -0.98
NCKAP1-202ENST00000361354 HSPA9P38646 679 aaKnown RBP8.96□□□□□ -0.98
NCKAP1-202ENST00000361354 TSC22D1Q15714 1073 aa8.96□□□□□ -0.98
NCKAP1-202ENST00000361354 FANCD2Q9BXW9 1451 aa8.96□□□□□ -0.98
NCKAP1-202ENST00000361354 TEX28O15482 410 aa8.96□□□□□ -0.98
NCKAP1-202ENST00000361354 TSC22D2O75157 780 aa8.96□□□□□ -0.98
NCKAP1-202ENST00000361354 PLEKHM2Q8IWE5 1019 aa8.96□□□□□ -0.98
NCKAP1-202ENST00000361354 ABCE1P61221 599 aaKnown RBP8.96□□□□□ -0.98
NCKAP1-202ENST00000361354 AASDHQ4L235 1098 aaPredicted RBP8.96□□□□□ -0.98
NCKAP1-202ENST00000361354 METTL23Q86XA0 190 aa8.96□□□□□ -0.98
NCKAP1-202ENST00000361354 GCOM2Q9BZD3 368 aaPredicted RBP8.96□□□□□ -0.98
NCKAP1-202ENST00000361354 RPAP3Q9H6T3 665 aaPredicted RBP8.96□□□□□ -0.98
NCKAP1-202ENST00000361354 FAM45BPQ6NSW5 357 aa8.96□□□□□ -0.98
NCKAP1-202ENST00000361354 C1orf228Q6PIY5 440 aa8.96□□□□□ -0.98
NCKAP1-202ENST00000361354 VPS50Q96JG6 964 aa8.96□□□□□ -0.98
NCKAP1-202ENST00000361354 CYP4F11Q9HBI6 524 aa8.96□□□□□ -0.98
NCKAP1-202ENST00000361354 CCT7Q99832 543 aa8.96□□□□□ -0.98
NCKAP1-202ENST00000361354 DDX25Q9UHL0 483 aaKnown RBP8.96□□□□□ -0.98
NCKAP1-202ENST00000361354 RBM46Q8TBY0 533 aaKnown RBP8.95□□□□□ -0.98
NCKAP1-202ENST00000361354 LOC102724159A0A0B4J2E5 919 aa8.95□□□□□ -0.98
NCKAP1-202ENST00000361354 ENO4A6NNW6 628 aa8.95□□□□□ -0.98
NCKAP1-202ENST00000361354 ZNF189O75820 626 aaPredicted RBP8.95□□□□□ -0.98
NCKAP1-202ENST00000361354 PWP2Q15269 919 aaKnown RBP8.95□□□□□ -0.98
NCKAP1-202ENST00000361354 FAM160B1Q5W0V3 765 aa8.95□□□□□ -0.98
NCKAP1-202ENST00000361354 KLHL25Q9H0H3 589 aa8.95□□□□□ -0.98
NCKAP1-202ENST00000361354 NFRKBQ6P4R8 1299 aa8.95□□□□□ -0.98
NCKAP1-202ENST00000361354 GRAMD1AQ96CP6 724 aa8.95□□□□□ -0.98
NCKAP1-202ENST00000361354 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.95□□□□□ -0.98
NCKAP1-202ENST00000361354 SPATA2Q9UM82 520 aa8.95□□□□□ -0.98
NCKAP1-202ENST00000361354 CIITAP33076 1130 aa8.95□□□□□ -0.98
NCKAP1-202ENST00000361354 SLFN12LQ6IEE8 588 aa8.95□□□□□ -0.98
NCKAP1-202ENST00000361354 STAG2Q8N3U4 1231 aa8.95□□□□□ -0.98
NCKAP1-202ENST00000361354 STX7O15400 261 aaKnown RBP8.95□□□□□ -0.98
NCKAP1-202ENST00000361354 NLRP11P59045 1033 aaKnown RBP8.95□□□□□ -0.98
NCKAP1-202ENST00000361354 PPP2R2AP63151 447 aa8.95□□□□□ -0.98
NCKAP1-202ENST00000361354 IYDQ6PHW0 289 aa8.95□□□□□ -0.98
NCKAP1-202ENST00000361354 FAF2Q96CS3 445 aa8.95□□□□□ -0.98
NCKAP1-202ENST00000361354 ZBED2Q9BTP6 218 aa8.95□□□□□ -0.98
NCKAP1-202ENST00000361354 AP1S2P56377 157 aa8.95□□□□□ -0.98
NCKAP1-202ENST00000361354 NHEJ1Q9H9Q4 299 aaPredicted RBP8.95□□□□□ -0.98
NCKAP1-202ENST00000361354 ZC3H7BQ9UGR2 993 aaKnown RBP8.95□□□□□ -0.98
NCKAP1-202ENST00000361354 RGS5O15539 181 aa8.95□□□□□ -0.98
NCKAP1-202ENST00000361354 APPL2Q8NEU8 664 aa8.95□□□□□ -0.98
NCKAP1-202ENST00000361354 RNF103O00237 685 aa8.95□□□□□ -0.98
NCKAP1-202ENST00000361354 DNALI1O14645 258 aaPredicted RBP8.95□□□□□ -0.98
NCKAP1-202ENST00000361354 GOLPH3LQ9H4A5 285 aa8.95□□□□□ -0.98
NCKAP1-202ENST00000361354 ATP8A2Q9NTI2 1148 aa8.95□□□□□ -0.98
NCKAP1-202ENST00000361354 GSPT1P15170 499 aaKnown RBP8.95□□□□□ -0.98
NCKAP1-202ENST00000361354 CLEC4FQ8N1N0 589 aa8.95□□□□□ -0.98
NCKAP1-202ENST00000361354 TRIM39Q9HCM9 518 aa8.95□□□□□ -0.98
NCKAP1-202ENST00000361354 H2AFY2Q9P0M6 372 aaPredicted RBP8.95□□□□□ -0.98
NCKAP1-202ENST00000361354 TRIM24O15164 1050 aa8.95□□□□□ -0.98
NCKAP1-202ENST00000361354 SYNCRIPO60506 623 aaKnown RBP8.95□□□□□ -0.98
NCKAP1-202ENST00000361354 NR2F2P24468 414 aa8.95□□□□□ -0.98
NCKAP1-202ENST00000361354 CHMP1BQ7LBR1 199 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms