RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 IFRD2Q12894 506 aaPredicted RBP8.2□□□□□ -1.1
CLCN3-202ENST00000360642 PWP1Q13610 501 aa8.2□□□□□ -1.1
CLCN3-202ENST00000360642 ELF2Q15723 593 aa8.2□□□□□ -1.1
CLCN3-202ENST00000360642 PRPF38AQ8NAV1 312 aaKnown RBP8.2□□□□□ -1.1
CLCN3-202ENST00000360642 ZFP42Q96MM3 310 aa8.2□□□□□ -1.1
CLCN3-202ENST00000360642 FAM53CQ9NYF3 392 aa8.2□□□□□ -1.1
CLCN3-202ENST00000360642 ADD3Q9UEY8 706 aaKnown RBP8.2□□□□□ -1.1
CLCN3-202ENST00000360642 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.2□□□□□ -1.1
CLCN3-202ENST00000360642 POLR3KQ9Y2Y1 108 aaPredicted RBP8.2□□□□□ -1.1
CLCN3-202ENST00000360642 MSRB2Q9Y3D2 182 aa8.2□□□□□ -1.1
CLCN3-202ENST00000360642 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.2□□□□□ -1.1
CLCN3-202ENST00000360642 V9GYY5 206 aaPredicted RBP8.2□□□□□ -1.1
CLCN3-202ENST00000360642 PLAURQ03405 335 aa8.2□□□□□ -1.1
CLCN3-202ENST00000360642 FAM182BQ5T319 152 aa8.2□□□□□ -1.1
CLCN3-202ENST00000360642 DZIP1Q86YF9 867 aaKnown RBP8.2□□□□□ -1.1
CLCN3-202ENST00000360642 HOMER1Q86YM7 354 aa8.2□□□□□ -1.1
CLCN3-202ENST00000360642 IQUBQ8NA54 791 aa8.2□□□□□ -1.1
CLCN3-202ENST00000360642 LRRN4CLQ8ND94 238 aa8.2□□□□□ -1.1
CLCN3-202ENST00000360642 WDR66Q8TBY9 1149 aa8.2□□□□□ -1.1
CLCN3-202ENST00000360642 PYM1Q9BRP8 204 aaKnown RBP8.2□□□□□ -1.1
CLCN3-202ENST00000360642 DNAI1Q9UI46 699 aa8.2□□□□□ -1.1
CLCN3-202ENST00000360642 MAD2L2Q9UI95 211 aa8.2□□□□□ -1.1
CLCN3-202ENST00000360642 SYNRGQ9UMZ2 1314 aa8.19□□□□□ -1.1
CLCN3-202ENST00000360642 LRRC10BA6NIK2 292 aa8.19□□□□□ -1.1
CLCN3-202ENST00000360642 TEX33O43247 280 aa8.19□□□□□ -1.1
CLCN3-202ENST00000360642 UPP2O95045 317 aa8.19□□□□□ -1.1
CLCN3-202ENST00000360642 MAPTP10636 758 aaKnown RBP8.19□□□□□ -1.1
CLCN3-202ENST00000360642 CALML3P27482 149 aa8.19□□□□□ -1.1
CLCN3-202ENST00000360642 GRM4Q14833 912 aa8.19□□□□□ -1.1
CLCN3-202ENST00000360642 FBXO38Q6PIJ6 1188 aa8.19□□□□□ -1.1
CLCN3-202ENST00000360642 C15orf52Q6ZUT6 534 aaKnown RBP8.19□□□□□ -1.1
CLCN3-202ENST00000360642 BLIDQ8IZY5 108 aa8.19□□□□□ -1.1
CLCN3-202ENST00000360642 SH3RF3Q8TEJ3 882 aaPredicted RBP8.19□□□□□ -1.1
CLCN3-202ENST00000360642 PANX2Q96RD6 677 aa8.19□□□□□ -1.1
CLCN3-202ENST00000360642 KAT14Q9H8E8 782 aa8.19□□□□□ -1.1
CLCN3-202ENST00000360642 TOR4AQ9NXH8 423 aa8.19□□□□□ -1.1
CLCN3-202ENST00000360642 PCDHA4Q9UN74 947 aa8.19□□□□□ -1.1
CLCN3-202ENST00000360642 TAF1LQ8IZX4 1826 aa8.19□□□□□ -1.1
CLCN3-202ENST00000360642 GOLGA6L9A6NEM1 432 aa8.19□□□□□ -1.1
CLCN3-202ENST00000360642 MCM7P33993 719 aa8.19□□□□□ -1.1
CLCN3-202ENST00000360642 LONP1P36776 959 aaKnown RBP8.19□□□□□ -1.1
CLCN3-202ENST00000360642 SPEM2Q0P670 501 aa8.19□□□□□ -1.1
CLCN3-202ENST00000360642 GRAPQ13588 217 aa8.19□□□□□ -1.1
CLCN3-202ENST00000360642 SLC35G1Q2M3R5 365 aa8.19□□□□□ -1.1
CLCN3-202ENST00000360642 FOXB2Q5VYV0 432 aa8.19□□□□□ -1.1
CLCN3-202ENST00000360642 TOGARAM2Q6ZUX3 1019 aa8.19□□□□□ -1.1
CLCN3-202ENST00000360642 KIAA0907Q7Z7F0 614 aaPredicted RBP8.19□□□□□ -1.1
CLCN3-202ENST00000360642 SMYD4Q8IYR2 804 aaPredicted RBP8.19□□□□□ -1.1
CLCN3-202ENST00000360642 GRAPLQ8TC17 118 aaPredicted RBP8.19□□□□□ -1.1
CLCN3-202ENST00000360642 GATAD2BQ8WXI9 593 aa8.19□□□□□ -1.1
CLCN3-202ENST00000360642 DYNLL2Q96FJ2 89 aa8.19□□□□□ -1.1
CLCN3-202ENST00000360642 CTAGE1Q96RT6 745 aa8.19□□□□□ -1.1
CLCN3-202ENST00000360642 ZNF576Q9H609 170 aa8.19□□□□□ -1.1
CLCN3-202ENST00000360642 CCNL1Q9UK58 526 aaPredicted RBP8.19□□□□□ -1.1
CLCN3-202ENST00000360642 FAM205AQ6ZU69 1335 aa8.19□□□□□ -1.1
CLCN3-202ENST00000360642 LY75O60449 1722 aa8.18□□□□□ -1.1
CLCN3-202ENST00000360642 H2AFXP16104 143 aaPredicted RBP8.18□□□□□ -1.1
CLCN3-202ENST00000360642 GRIK5Q16478 980 aa8.18□□□□□ -1.1
CLCN3-202ENST00000360642 ERCC6LQ2NKX8 1250 aa8.18□□□□□ -1.1
CLCN3-202ENST00000360642 CCDC178Q5BJE1 867 aa8.18□□□□□ -1.1
CLCN3-202ENST00000360642 MRPL14Q6P1L8 145 aaKnown RBP8.18□□□□□ -1.1
CLCN3-202ENST00000360642 DAGLBQ8NCG7 672 aa8.18□□□□□ -1.1
CLCN3-202ENST00000360642 GAL3ST3Q96A11 431 aa8.18□□□□□ -1.1
CLCN3-202ENST00000360642 RNF166Q96A37 237 aaPredicted RBP8.18□□□□□ -1.1
CLCN3-202ENST00000360642 THSD7AQ9UPZ6 1657 aa8.18□□□□□ -1.1
CLCN3-202ENST00000360642 AKR1B15C9JRZ8 316 aaPredicted RBP8.18□□□□□ -1.1
CLCN3-202ENST00000360642 CYTH3O43739 400 aa8.18□□□□□ -1.1
CLCN3-202ENST00000360642 MYCLP1P12525 358 aaPredicted RBP8.18□□□□□ -1.1
CLCN3-202ENST00000360642 GPC1P35052 558 aa8.18□□□□□ -1.1
CLCN3-202ENST00000360642 STX17P56962 302 aa8.18□□□□□ -1.1
CLCN3-202ENST00000360642 LMNB2Q03252 620 aa8.18□□□□□ -1.1
CLCN3-202ENST00000360642 CCINQ13939 588 aa8.18□□□□□ -1.1
CLCN3-202ENST00000360642 HIF1AQ16665 826 aa8.18□□□□□ -1.1
CLCN3-202ENST00000360642 SLITRK4Q8IW52 837 aa8.18□□□□□ -1.1
CLCN3-202ENST00000360642 STAMQ92783 540 aa8.18□□□□□ -1.1
CLCN3-202ENST00000360642 CSADQ9Y600 493 aa8.18□□□□□ -1.1
CLCN3-202ENST00000360642 BAZ2BQ9UIF8 2168 aaKnown RBP8.18□□□□□ -1.1
CLCN3-202ENST00000360642 SPATA31C2B4DYI2 1134 aa8.18□□□□□ -1.1
CLCN3-202ENST00000360642 GNAQP50148 359 aa8.18□□□□□ -1.1
CLCN3-202ENST00000360642 GSTO1P78417 241 aa8.18□□□□□ -1.1
CLCN3-202ENST00000360642 NFIXQ14938 502 aa8.18□□□□□ -1.1
CLCN3-202ENST00000360642 ZNF423Q2M1K9 1284 aa8.18□□□□□ -1.1
CLCN3-202ENST00000360642 KLHL10Q6JEL2 608 aa8.18□□□□□ -1.1
CLCN3-202ENST00000360642 BLZF1Q9H2G9 400 aa8.18□□□□□ -1.1
CLCN3-202ENST00000360642 LIMA1Q9UHB6 759 aaKnown RBP8.18□□□□□ -1.1
CLCN3-202ENST00000360642 RWDD2AQ9UIY3 292 aa8.18□□□□□ -1.1
CLCN3-202ENST00000360642 PCDHA6Q9UN73 950 aa8.18□□□□□ -1.1
CLCN3-202ENST00000360642 PCDHA8Q9Y5H6 950 aa8.18□□□□□ -1.1
CLCN3-202ENST00000360642 ITIH6Q6UXX5 1313 aa8.18□□□□□ -1.1
CLCN3-202ENST00000360642 BNIP3LO60238 219 aa8.17□□□□□ -1.1
CLCN3-202ENST00000360642 BAG3O95817 575 aa8.17□□□□□ -1.1
CLCN3-202ENST00000360642 EIF2AK2P19525 551 aaKnown RBP8.17□□□□□ -1.1
CLCN3-202ENST00000360642 GIPRP48546 466 aa8.17□□□□□ -1.1
CLCN3-202ENST00000360642 ZNF658Q5TYW1 1059 aaPredicted RBP8.17□□□□□ -1.1
CLCN3-202ENST00000360642 GALNT17Q6IS24 598 aa8.17□□□□□ -1.1
CLCN3-202ENST00000360642 IGSF22Q8N9C0 903 aa8.17□□□□□ -1.1
CLCN3-202ENST00000360642 SLC7A3Q8WY07 619 aa8.17□□□□□ -1.1
CLCN3-202ENST00000360642 KIFC2Q96AC6 838 aa8.17□□□□□ -1.1
CLCN3-202ENST00000360642 NAA15Q9BXJ9 866 aaKnown RBP8.17□□□□□ -1.1
CLCN3-202ENST00000360642 RTFDC1Q9BY42 306 aaPredicted RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms