RNA–Protein interactions for RNA: ENST00000360620.7

EPHB4-202, Transcript of EPH receptor B4, humanhuman

TSL 1 (best) BASIC

Gene EPHB4, Length 3,789 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-202ENST00000360620 NPHP3-ACAD11A0A0J9YXS1 232 aa12.97□□□□□ -0.33
EPHB4-202ENST00000360620 ZNF233A6NK53 670 aa12.97□□□□□ -0.33
EPHB4-202ENST00000360620 USP17L15C9J2P7 530 aa12.97□□□□□ -0.33
EPHB4-202ENST00000360620 USP17L13C9JLJ4 530 aa12.97□□□□□ -0.33
EPHB4-202ENST00000360620 USP17L11C9JVI0 530 aa12.97□□□□□ -0.33
EPHB4-202ENST00000360620 USP17L18D6R9N7 530 aa12.97□□□□□ -0.33
EPHB4-202ENST00000360620 USP17L22D6RA61 530 aa12.97□□□□□ -0.33
EPHB4-202ENST00000360620 USP17L17D6RBQ6 530 aa12.97□□□□□ -0.33
EPHB4-202ENST00000360620 USP17L19D6RCP7 530 aa12.97□□□□□ -0.33
EPHB4-202ENST00000360620 USP17L20D6RJB6 530 aa12.97□□□□□ -0.33
EPHB4-202ENST00000360620 DDX39AO00148 427 aaKnown RBP12.97□□□□□ -0.33
EPHB4-202ENST00000360620 NR3C1P04150 777 aa12.97□□□□□ -0.33
EPHB4-202ENST00000360620 CHN1P15882 459 aa12.97□□□□□ -0.33
EPHB4-202ENST00000360620 USP17L24Q0WX57 530 aa12.97□□□□□ -0.33
EPHB4-202ENST00000360620 TCP10Q12799 353 aa12.97□□□□□ -0.33
EPHB4-202ENST00000360620 TRAF1Q13077 416 aa12.97□□□□□ -0.33
EPHB4-202ENST00000360620 GRB10Q13322 594 aa12.97□□□□□ -0.33
EPHB4-202ENST00000360620 KNOP1Q1ED39 458 aaKnown RBP12.97□□□□□ -0.33
EPHB4-202ENST00000360620 ODR4Q5SWX8 454 aa12.97□□□□□ -0.33
EPHB4-202ENST00000360620 AGBL2Q5U5Z8 902 aa12.97□□□□□ -0.33
EPHB4-202ENST00000360620 USP17L6PQ6QN14 398 aa12.97□□□□□ -0.33
EPHB4-202ENST00000360620 ZNF662Q6ZS27 426 aa12.97□□□□□ -0.33
EPHB4-202ENST00000360620 CAPN12Q6ZSI9 719 aa12.97□□□□□ -0.33
EPHB4-202ENST00000360620 PPFIBP2Q8ND30 876 aa12.97□□□□□ -0.33
EPHB4-202ENST00000360620 FAM212AQ96EL1 285 aa12.97□□□□□ -0.33
EPHB4-202ENST00000360620 RAB3IPQ96QF0 476 aaPredicted RBP12.97□□□□□ -0.33
EPHB4-202ENST00000360620 STK24Q9Y6E0 443 aa12.97□□□□□ -0.33
EPHB4-202ENST00000360620 PNMA6FA0A0J9YX94 578 aa12.97□□□□□ -0.33
EPHB4-202ENST00000360620 KIF1CO43896 1103 aaKnown RBP12.97□□□□□ -0.33
EPHB4-202ENST00000360620 ECEL1O95672 775 aa12.97□□□□□ -0.33
EPHB4-202ENST00000360620 TTLL1O95922 423 aa12.97□□□□□ -0.33
EPHB4-202ENST00000360620 FUT2Q10981 343 aa12.97□□□□□ -0.33
EPHB4-202ENST00000360620 PDIA5Q14554 519 aa12.97□□□□□ -0.33
EPHB4-202ENST00000360620 CALR3Q96L12 384 aaKnown RBP12.97□□□□□ -0.33
EPHB4-202ENST00000360620 DNAAF5Q86Y56 855 aa12.96□□□□□ -0.33
EPHB4-202ENST00000360620 TBC1D22AQ8WUA7 517 aa12.96□□□□□ -0.33
EPHB4-202ENST00000360620 RAPGEF5Q92565 580 aa12.96□□□□□ -0.33
EPHB4-202ENST00000360620 STMN2Q93045 179 aa12.96□□□□□ -0.33
EPHB4-202ENST00000360620 MAD2L2Q9UI95 211 aa12.96□□□□□ -0.33
EPHB4-202ENST00000360620 USTQ9Y2C2 406 aa12.96□□□□□ -0.33
EPHB4-202ENST00000360620 TACC3Q9Y6A5 838 aa12.96□□□□□ -0.33
EPHB4-202ENST00000360620 MXRA7P84157 204 aa12.96□□□□□ -0.33
EPHB4-202ENST00000360620 UAP1Q16222 522 aaPredicted RBP12.96□□□□□ -0.33
EPHB4-202ENST00000360620 FYB2Q5VWT5 728 aa12.96□□□□□ -0.33
EPHB4-202ENST00000360620 SYN2Q92777 582 aaPredicted RBP12.96□□□□□ -0.33
EPHB4-202ENST00000360620 CDCA7Q9BWT1 371 aaPredicted RBP12.96□□□□□ -0.33
EPHB4-202ENST00000360620 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.96□□□□□ -0.332e-7■■■■□ 24.5
EPHB4-202ENST00000360620 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.96□□□□□ -0.33
EPHB4-202ENST00000360620 TMOD4Q9NZQ9 345 aa12.96□□□□□ -0.33
EPHB4-202ENST00000360620 CPSF2Q9P2I0 782 aaKnown RBP12.96□□□□□ -0.33
EPHB4-202ENST00000360620 ABCB11O95342 1321 aa12.96□□□□□ -0.34
EPHB4-202ENST00000360620 ZNF263O14978 683 aa12.96□□□□□ -0.34
EPHB4-202ENST00000360620 GAS7O60861 476 aa12.96□□□□□ -0.34
EPHB4-202ENST00000360620 GALCP54803 685 aa12.96□□□□□ -0.34
EPHB4-202ENST00000360620 ERVK-9P63128 1117 aa12.96□□□□□ -0.34
EPHB4-202ENST00000360620 SGO2Q562F6 1265 aa12.96□□□□□ -0.34
EPHB4-202ENST00000360620 MIIPQ5JXC2 388 aa12.96□□□□□ -0.34
EPHB4-202ENST00000360620 MARCH10Q8NA82 808 aaPredicted RBP12.96□□□□□ -0.34
EPHB4-202ENST00000360620 DAGLBQ8NCG7 672 aa12.96□□□□□ -0.34
EPHB4-202ENST00000360620 NEDD1Q8NHV4 660 aa12.96□□□□□ -0.34
EPHB4-202ENST00000360620 RFFLQ8WZ73 363 aa12.96□□□□□ -0.34
EPHB4-202ENST00000360620 NAGPAQ9UK23 515 aa12.96□□□□□ -0.34
EPHB4-202ENST00000360620 SIK3Q9Y2K2 1263 aa12.96□□□□□ -0.34
EPHB4-202ENST00000360620 LRRC37A3O60309 1634 aa12.96□□□□□ -0.34
EPHB4-202ENST00000360620 ABCC6O95255 1503 aa12.96□□□□□ -0.34
EPHB4-202ENST00000360620 ATRNO75882 1429 aa12.96□□□□□ -0.34
EPHB4-202ENST00000360620 PODXLO00592 558 aa12.95□□□□□ -0.34
EPHB4-202ENST00000360620 FSBPO95073 299 aa12.95□□□□□ -0.34
EPHB4-202ENST00000360620 ATF2P15336 505 aa12.95□□□□□ -0.34
EPHB4-202ENST00000360620 STAT3P40763 770 aa12.95□□□□□ -0.34
EPHB4-202ENST00000360620 RASSF2P50749 326 aa12.95□□□□□ -0.34
EPHB4-202ENST00000360620 SESN3P58005 492 aa12.95□□□□□ -0.34
EPHB4-202ENST00000360620 PLCB4Q15147 1175 aa12.95□□□□□ -0.34
EPHB4-202ENST00000360620 MEI1Q5TIA1 1274 aa12.95□□□□□ -0.34
EPHB4-202ENST00000360620 CYP4F22Q6NT55 531 aa12.95□□□□□ -0.34
EPHB4-202ENST00000360620 GBP7Q8N8V2 638 aaPredicted RBP12.95□□□□□ -0.34
EPHB4-202ENST00000360620 CCHCR1Q8TD31 782 aa12.95□□□□□ -0.34
EPHB4-202ENST00000360620 MCUR1Q96AQ8 359 aa12.95□□□□□ -0.34
EPHB4-202ENST00000360620 ANO3Q9BYT9 981 aa12.95□□□□□ -0.34
EPHB4-202ENST00000360620 VPS37BQ9H9H4 285 aa12.95□□□□□ -0.34
EPHB4-202ENST00000360620 USP40Q9NVE5 1235 aa12.95□□□□□ -0.34
EPHB4-202ENST00000360620 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.95□□□□□ -0.34
EPHB4-202ENST00000360620 NFAT5O94916 1531 aa12.95□□□□□ -0.34
EPHB4-202ENST00000360620 SHOX2O60902 331 aaPredicted RBP12.95□□□□□ -0.34
EPHB4-202ENST00000360620 HSPA9P38646 679 aaKnown RBP12.95□□□□□ -0.34
EPHB4-202ENST00000360620 DRAP1Q14919 205 aaPredicted RBP12.95□□□□□ -0.34
EPHB4-202ENST00000360620 TRIP13Q15645 432 aaPredicted RBP12.95□□□□□ -0.34
EPHB4-202ENST00000360620 TNFRSF25Q93038 417 aa12.95□□□□□ -0.34
EPHB4-202ENST00000360620 CCDC127Q96BQ5 260 aa12.95□□□□□ -0.34
EPHB4-202ENST00000360620 ZNF653Q96CK0 615 aa12.95□□□□□ -0.34
EPHB4-202ENST00000360620 SH3GL2Q99962 352 aa12.95□□□□□ -0.34
EPHB4-202ENST00000360620 MXD3Q9BW11 206 aa12.95□□□□□ -0.34
EPHB4-202ENST00000360620 GDF3Q9NR23 364 aa12.95□□□□□ -0.34
EPHB4-202ENST00000360620 SERPINB13Q9UIV8 391 aa12.95□□□□□ -0.34
EPHB4-202ENST00000360620 SYNGAP1Q96PV0 1343 aa12.95□□□□□ -0.34
EPHB4-202ENST00000360620 CPP00450 1065 aa12.95□□□□□ -0.34
EPHB4-202ENST00000360620 FGFR4P22455 802 aa12.95□□□□□ -0.34
EPHB4-202ENST00000360620 COPB2P35606 906 aa12.95□□□□□ -0.34
EPHB4-202ENST00000360620 TAF11Q15544 211 aa12.95□□□□□ -0.34
EPHB4-202ENST00000360620 DDX20Q9UHI6 824 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms