RNA–Protein interactions for RNA: ENST00000359429.10

RPE-202, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPE, Length 2,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-202ENST00000359429 SUCLA2Q9P2R7 463 aaPredicted RBP11.86□□□□□ -0.51
RPE-202ENST00000359429 ARMCX3Q9UH62 379 aaPredicted RBP11.86□□□□□ -0.51
RPE-202ENST00000359429 CCDC88AQ3V6T2 1871 aa11.86□□□□□ -0.51
RPE-202ENST00000359429 FRMD3A2A2Y4 597 aa11.85□□□□□ -0.51
RPE-202ENST00000359429 FGGP02679 453 aa11.85□□□□□ -0.51
RPE-202ENST00000359429 AFPP02771 609 aaKnown RBP11.85□□□□□ -0.51
RPE-202ENST00000359429 H2AFZP0C0S5 128 aa11.85□□□□□ -0.51
RPE-202ENST00000359429 HOXA7P31268 230 aaPredicted RBP11.85□□□□□ -0.51
RPE-202ENST00000359429 SLC12A3P55017 1021 aa11.85□□□□□ -0.51
RPE-202ENST00000359429 RHBDL3P58872 404 aa11.85□□□□□ -0.51
RPE-202ENST00000359429 GSTO1P78417 241 aa11.85□□□□□ -0.51
RPE-202ENST00000359429 MTMR3Q13615 1198 aa11.85□□□□□ -0.51
RPE-202ENST00000359429 EPHA7Q15375 998 aa11.85□□□□□ -0.51
RPE-202ENST00000359429 LACTB2Q53H82 288 aaPredicted RBP11.85□□□□□ -0.51
RPE-202ENST00000359429 H2AFVQ71UI9 128 aa11.85□□□□□ -0.51
RPE-202ENST00000359429 CPLX4Q7Z7G2 160 aa11.85□□□□□ -0.51
RPE-202ENST00000359429 ADGRF4Q8IZF3 695 aa11.85□□□□□ -0.51
RPE-202ENST00000359429 U2AF1L4Q8WU68 220 aaKnown RBP11.85□□□□□ -0.51
RPE-202ENST00000359429 SCLT1Q96NL6 688 aa11.85□□□□□ -0.51
RPE-202ENST00000359429 IKZF4Q9H2S9 585 aa11.85□□□□□ -0.51
RPE-202ENST00000359429 ERVK-5Q9HDB9 667 aa11.85□□□□□ -0.51
RPE-202ENST00000359429 MTMR4Q9NYA4 1195 aa11.85□□□□□ -0.51
RPE-202ENST00000359429 PPP1R9AQ9ULJ8 1098 aa11.85□□□□□ -0.51
RPE-202ENST00000359429 IGSF9BQ9UPX0 1349 aa11.85□□□□□ -0.51
RPE-202ENST00000359429 MEIS1O00470 390 aa11.85□□□□□ -0.51
RPE-202ENST00000359429 BUB1BO60566 1050 aaPredicted RBP11.85□□□□□ -0.51
RPE-202ENST00000359429 FLOT1O75955 427 aa11.85□□□□□ -0.51
RPE-202ENST00000359429 GALCP54803 685 aa11.85□□□□□ -0.51
RPE-202ENST00000359429 JAM2P57087 298 aa11.85□□□□□ -0.51
RPE-202ENST00000359429 KCNA1Q09470 495 aa11.85□□□□□ -0.51
RPE-202ENST00000359429 NEDD9Q14511 834 aa11.85□□□□□ -0.51
RPE-202ENST00000359429 E2F5Q15329 346 aa11.85□□□□□ -0.51
RPE-202ENST00000359429 IFI16Q16666 785 aaKnown RBP11.85□□□□□ -0.51
RPE-202ENST00000359429 ERMARDQ5T6L9 678 aa11.85□□□□□ -0.51
RPE-202ENST00000359429 GKAP1Q5VSY0 366 aaPredicted RBP11.85□□□□□ -0.51
RPE-202ENST00000359429 LNX1Q8TBB1 728 aaPredicted RBP11.85□□□□□ -0.51
RPE-202ENST00000359429 HVCN1Q96D96 273 aa11.85□□□□□ -0.51
RPE-202ENST00000359429 XPO6Q96QU8 1125 aaKnown RBP11.85□□□□□ -0.51
RPE-202ENST00000359429 MTFR1LQ9H019 292 aa11.85□□□□□ -0.51
RPE-202ENST00000359429 NT5C3AQ9H0P0 336 aa11.85□□□□□ -0.51
RPE-202ENST00000359429 SLITRK6Q9H5Y7 841 aa11.85□□□□□ -0.51
RPE-202ENST00000359429 BZW2Q9Y6E2 419 aaKnown RBP11.85□□□□□ -0.51
RPE-202ENST00000359429 GPR75-ASB3A0A0A6YYF3 556 aa11.84□□□□□ -0.51
RPE-202ENST00000359429 USP17L15C9J2P7 530 aa11.84□□□□□ -0.51
RPE-202ENST00000359429 USP17L13C9JLJ4 530 aa11.84□□□□□ -0.51
RPE-202ENST00000359429 USP17L11C9JVI0 530 aa11.84□□□□□ -0.51
RPE-202ENST00000359429 USP17L18D6R9N7 530 aa11.84□□□□□ -0.51
RPE-202ENST00000359429 USP17L22D6RA61 530 aa11.84□□□□□ -0.51
RPE-202ENST00000359429 USP17L17D6RBQ6 530 aa11.84□□□□□ -0.51
RPE-202ENST00000359429 USP17L19D6RCP7 530 aa11.84□□□□□ -0.51
RPE-202ENST00000359429 USP17L20D6RJB6 530 aa11.84□□□□□ -0.51
RPE-202ENST00000359429 hCG_1984214I3L0E3 225 aa11.84□□□□□ -0.51
RPE-202ENST00000359429 C21orf2O43822 256 aa11.84□□□□□ -0.51
RPE-202ENST00000359429 PPFIA2O75334 1257 aa11.84□□□□□ -0.51
RPE-202ENST00000359429 KRT18P05783 430 aaKnown RBP11.84□□□□□ -0.51
RPE-202ENST00000359429 SNHG28P0DPA3 235 aa11.84□□□□□ -0.51
RPE-202ENST00000359429 AKR1B1P15121 316 aa11.84□□□□□ -0.51
RPE-202ENST00000359429 USP17L24Q0WX57 530 aa11.84□□□□□ -0.51
RPE-202ENST00000359429 XRCC4Q13426 336 aa11.84□□□□□ -0.51
RPE-202ENST00000359429 TCERG1LQ5VWI1 586 aa11.84□□□□□ -0.51
RPE-202ENST00000359429 USP17L6PQ6QN14 398 aa11.84□□□□□ -0.51
RPE-202ENST00000359429 ZNF713Q8N859 430 aaPredicted RBP11.84□□□□□ -0.51
RPE-202ENST00000359429 CCDC26Q8TAB7 109 aa11.84□□□□□ -0.51
RPE-202ENST00000359429 GLG1Q92896 1179 aa11.84□□□□□ -0.51
RPE-202ENST00000359429 ZNF317Q96PQ6 595 aaPredicted RBP11.84□□□□□ -0.51
RPE-202ENST00000359429 SETDB2Q96T68 719 aa11.84□□□□□ -0.51
RPE-202ENST00000359429 ADAM7Q9H2U9 754 aa11.84□□□□□ -0.51
RPE-202ENST00000359429 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.84□□□□□ -0.51
RPE-202ENST00000359429 UTP11Q9Y3A2 253 aaKnown RBP11.84□□□□□ -0.51
RPE-202ENST00000359429 ROBO1Q9Y6N7 1651 aa11.84□□□□□ -0.51
RPE-202ENST00000359429 DDX3YO15523 660 aaKnown RBP11.84□□□□□ -0.51
RPE-202ENST00000359429 CTNND1O60716 968 aaKnown RBP11.84□□□□□ -0.51
RPE-202ENST00000359429 GFPT2O94808 682 aa11.84□□□□□ -0.51
RPE-202ENST00000359429 LDHCP07864 332 aa11.84□□□□□ -0.51
RPE-202ENST00000359429 ELF1P32519 619 aa11.84□□□□□ -0.51
RPE-202ENST00000359429 IFFO1Q0D2I5 559 aa11.84□□□□□ -0.51
RPE-202ENST00000359429 GIT2Q14161 759 aa11.84□□□□□ -0.51
RPE-202ENST00000359429 KNOP1Q1ED39 458 aaKnown RBP11.84□□□□□ -0.51
RPE-202ENST00000359429 FRMD5Q7Z6J6 570 aa11.84□□□□□ -0.51
RPE-202ENST00000359429 SFR1Q86XK3 245 aa11.84□□□□□ -0.51
RPE-202ENST00000359429 GIMAP7Q8NHV1 300 aa11.84□□□□□ -0.51
RPE-202ENST00000359429 SLC35C1Q96A29 364 aa11.84□□□□□ -0.51
RPE-202ENST00000359429 CHMP6Q96FZ7 201 aa11.84□□□□□ -0.51
RPE-202ENST00000359429 FMO2Q99518 471 aa11.84□□□□□ -0.51
RPE-202ENST00000359429 DHX36Q9H2U1 1008 aaKnown RBP11.84□□□□□ -0.51
RPE-202ENST00000359429 ZDHHC18Q9NUE0 388 aa11.84□□□□□ -0.51
RPE-202ENST00000359429 ODF2LQ9ULJ1 636 aa11.84□□□□□ -0.51
RPE-202ENST00000359429 TRAF3IP3Q9Y228 551 aa11.84□□□□□ -0.51
RPE-202ENST00000359429 KDM3AQ9Y4C1 1321 aa11.84□□□□□ -0.51
RPE-202ENST00000359429 PNMA6FA0A0J9YX94 578 aa11.83□□□□□ -0.52
RPE-202ENST00000359429 RSPH10B2B2RC85 870 aa11.83□□□□□ -0.52
RPE-202ENST00000359429 USP17L10C9JJH3 530 aa11.83□□□□□ -0.52
RPE-202ENST00000359429 CLIC2O15247 247 aa11.83□□□□□ -0.52
RPE-202ENST00000359429 PPIP5K2O43314 1243 aa11.83□□□□□ -0.52
RPE-202ENST00000359429 RSPH10BP0C881 870 aa11.83□□□□□ -0.52
RPE-202ENST00000359429 SLURP2P0DP57 97 aa11.83□□□□□ -0.52
RPE-202ENST00000359429 XRCC5P13010 732 aaKnown RBP11.83□□□□□ -0.52
RPE-202ENST00000359429 CHN1P15882 459 aa11.83□□□□□ -0.52
RPE-202ENST00000359429 POLD1P28340 1107 aa11.83□□□□□ -0.52
RPE-202ENST00000359429 PABPC4Q13310 644 aaKnown RBP eCLIP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms