RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 PNMA8AQ86V59 439 aaPredicted RBP16.37■□□□□ 0.21
GABPB1-202ENST00000359031 MYCT1Q8N699 235 aa16.37■□□□□ 0.21
GABPB1-202ENST00000359031 IL31RAQ8NI17 732 aa16.37■□□□□ 0.21
GABPB1-202ENST00000359031 C12orf42Q96LP6 360 aa16.37■□□□□ 0.21
GABPB1-202ENST00000359031 DDX41Q9UJV9 622 aaKnown RBP16.37■□□□□ 0.21
GABPB1-202ENST00000359031 ANO9A1A5B4 782 aa16.37■□□□□ 0.21
GABPB1-202ENST00000359031 XRCC5P13010 732 aaKnown RBP16.37■□□□□ 0.21
GABPB1-202ENST00000359031 ERCC3P19447 782 aa16.37■□□□□ 0.21
GABPB1-202ENST00000359031 EIF4A3P38919 411 aaKnown RBP16.37■□□□□ 0.21
GABPB1-202ENST00000359031 BACE1P56817 501 aa16.37■□□□□ 0.21
GABPB1-202ENST00000359031 KCNH2Q12809 1159 aa16.37■□□□□ 0.21
GABPB1-202ENST00000359031 MUM1L1Q5H9M0 696 aa16.37■□□□□ 0.21
GABPB1-202ENST00000359031 SFMBT2Q5VUG0 894 aa16.37■□□□□ 0.21
GABPB1-202ENST00000359031 MAP1SQ66K74 1059 aaPredicted RBP16.37■□□□□ 0.21
GABPB1-202ENST00000359031 CCDC155Q8N6L0 562 aa16.37■□□□□ 0.21
GABPB1-202ENST00000359031 IFIH1Q9BYX4 1025 aaKnown RBP16.37■□□□□ 0.21
GABPB1-202ENST00000359031 GANQ9H2C0 597 aa16.37■□□□□ 0.21
GABPB1-202ENST00000359031 PLCB1Q9NQ66 1216 aa16.37■□□□□ 0.21
GABPB1-202ENST00000359031 PICK1Q9NRD5 415 aa16.37■□□□□ 0.21
GABPB1-202ENST00000359031 TBC1D22BQ9NU19 505 aa16.37■□□□□ 0.21
GABPB1-202ENST00000359031 WRAP73Q9P2S5 460 aaPredicted RBP16.37■□□□□ 0.21
GABPB1-202ENST00000359031 PPP2R3BQ9Y5P8 575 aa16.37■□□□□ 0.21
GABPB1-202ENST00000359031 POTEB2H3BUK9 544 aa16.36■□□□□ 0.21
GABPB1-202ENST00000359031 ZNF263O14978 683 aa16.36■□□□□ 0.21
GABPB1-202ENST00000359031 DHX15O43143 795 aaKnown RBP16.36■□□□□ 0.21
GABPB1-202ENST00000359031 AKR1B10O60218 316 aa16.36■□□□□ 0.21
GABPB1-202ENST00000359031 SERPING1P05155 500 aa16.36■□□□□ 0.21
GABPB1-202ENST00000359031 P4HBP07237 508 aaKnown RBP16.36■□□□□ 0.21
GABPB1-202ENST00000359031 PLEKP08567 350 aaPredicted RBP16.36■□□□□ 0.21
GABPB1-202ENST00000359031 OAZ1P54368 228 aa16.36■□□□□ 0.21
GABPB1-202ENST00000359031 MAP2K1Q02750 393 aaPredicted RBP16.36■□□□□ 0.21
GABPB1-202ENST00000359031 DGKZQ13574 1117 aa16.36■□□□□ 0.21
GABPB1-202ENST00000359031 MTMR1Q13613 665 aa16.36■□□□□ 0.21
GABPB1-202ENST00000359031 SLC9C1Q4G0N8 1177 aa16.36■□□□□ 0.21
GABPB1-202ENST00000359031 XRRA1Q6P2D8 792 aa16.36■□□□□ 0.21
GABPB1-202ENST00000359031 TRAPPC11Q7Z392 1133 aa16.36■□□□□ 0.21
GABPB1-202ENST00000359031 ZNF280CQ8ND82 737 aa16.36■□□□□ 0.21
GABPB1-202ENST00000359031 ABHD8Q96I13 439 aa16.36■□□□□ 0.21
GABPB1-202ENST00000359031 ZFP91Q96JP5 570 aaPredicted RBP16.36■□□□□ 0.21
GABPB1-202ENST00000359031 MKNK1Q9BUB5 465 aa16.36■□□□□ 0.21
GABPB1-202ENST00000359031 LACRTQ9GZZ8 138 aa16.36■□□□□ 0.21
GABPB1-202ENST00000359031 ZSWIM4Q9H7M6 989 aa16.36■□□□□ 0.21
GABPB1-202ENST00000359031 OGFRQ9NZT2 677 aa16.36■□□□□ 0.21
GABPB1-202ENST00000359031 DBR1Q9UK59 544 aaKnown RBP16.36■□□□□ 0.21
GABPB1-202ENST00000359031 MYO6Q9UM54 1294 aa16.36■□□□□ 0.21
GABPB1-202ENST00000359031 PCDHA13Q9Y5I0 950 aa16.36■□□□□ 0.21
GABPB1-202ENST00000359031 RBAK-RBAKDNI3L0D1 243 aa16.35■□□□□ 0.21
GABPB1-202ENST00000359031 VWA5AO00534 786 aa16.35■□□□□ 0.21
GABPB1-202ENST00000359031 AKAP3O75969 853 aa16.35■□□□□ 0.21
GABPB1-202ENST00000359031 LYPLA2O95372 231 aa16.35■□□□□ 0.21
GABPB1-202ENST00000359031 HSPA8P11142 646 aaKnown RBP16.35■□□□□ 0.21
GABPB1-202ENST00000359031 CLCN6P51797 869 aa16.35■□□□□ 0.21
GABPB1-202ENST00000359031 RPS6P62753 249 aaKnown RBP16.35■□□□□ 0.21
GABPB1-202ENST00000359031 MRPS9P82933 396 aaKnown RBP16.35■□□□□ 0.21
GABPB1-202ENST00000359031 SPP2Q13103 211 aa16.35■□□□□ 0.21
GABPB1-202ENST00000359031 PGM5Q15124 567 aa16.35■□□□□ 0.21
GABPB1-202ENST00000359031 ASTE1Q2TB18 679 aaPredicted RBP16.35■□□□□ 0.21
GABPB1-202ENST00000359031 RNF207Q6ZRF8 634 aa16.35■□□□□ 0.21
GABPB1-202ENST00000359031 FAM178BQ8IXR5 827 aa16.35■□□□□ 0.21
GABPB1-202ENST00000359031 BANK1Q8NDB2 785 aa16.35■□□□□ 0.21
GABPB1-202ENST00000359031 GOLGA5Q8TBA6 731 aa16.35■□□□□ 0.21
GABPB1-202ENST00000359031 SECISBP2LQ93073 1101 aaKnown RBP16.35■□□□□ 0.21
GABPB1-202ENST00000359031 TRERF1Q96PN7 1200 aa16.35■□□□□ 0.21
GABPB1-202ENST00000359031 WRNIP1Q96S55 665 aa16.35■□□□□ 0.21
GABPB1-202ENST00000359031 FIZ1Q96SL8 496 aa16.35■□□□□ 0.21
GABPB1-202ENST00000359031 ARID3AQ99856 593 aa16.35■□□□□ 0.21
GABPB1-202ENST00000359031 HOMER2Q9NSB8 354 aa16.35■□□□□ 0.21
GABPB1-202ENST00000359031 RCCD1A6NED2 376 aa16.34■□□□□ 0.21
GABPB1-202ENST00000359031 C19orf81C9J6K1 198 aa16.34■□□□□ 0.21
GABPB1-202ENST00000359031 DDX39AO00148 427 aaKnown RBP16.34■□□□□ 0.21
GABPB1-202ENST00000359031 PJA2O43164 708 aa16.34■□□□□ 0.21
GABPB1-202ENST00000359031 TGFB1I1O43294 461 aa16.34■□□□□ 0.21
GABPB1-202ENST00000359031 PPP1R12BO60237 982 aaPredicted RBP16.34■□□□□ 0.21
GABPB1-202ENST00000359031 PTPRAP18433 802 aa16.34■□□□□ 0.21
GABPB1-202ENST00000359031 NMT1P30419 496 aaKnown RBP16.34■□□□□ 0.21
GABPB1-202ENST00000359031 POLR2FP61218 127 aaKnown RBP16.34■□□□□ 0.21
GABPB1-202ENST00000359031 CYP27A1Q02318 531 aa16.34■□□□□ 0.21
GABPB1-202ENST00000359031 GRM1Q13255 1194 aa16.34■□□□□ 0.21
GABPB1-202ENST00000359031 ITGB3BPQ13352 177 aaPredicted RBP16.34■□□□□ 0.21
GABPB1-202ENST00000359031 ALCAMQ13740 583 aa16.34■□□□□ 0.21
GABPB1-202ENST00000359031 ANGEL2Q5VTE6 544 aaKnown RBP16.34■□□□□ 0.21
GABPB1-202ENST00000359031 PAPD7Q5XG87 772 aaKnown RBP16.34■□□□□ 0.21
GABPB1-202ENST00000359031 HGSNATQ68CP4 663 aa16.34■□□□□ 0.21
GABPB1-202ENST00000359031 ZNF720Q7Z2F6 126 aa16.34■□□□□ 0.21
GABPB1-202ENST00000359031 TAAR1Q96RJ0 339 aa16.34■□□□□ 0.21
GABPB1-202ENST00000359031 BEGAINQ9BUH8 593 aa16.34■□□□□ 0.21
GABPB1-202ENST00000359031 NLRC4Q9NPP4 1024 aa16.34■□□□□ 0.21
GABPB1-202ENST00000359031 LUC7LQ9NQ29 371 aaKnown RBP16.34■□□□□ 0.21
GABPB1-202ENST00000359031 PXMP2Q9NR77 195 aa16.34■□□□□ 0.21
GABPB1-202ENST00000359031 PCDHB13Q9Y5F0 798 aa16.34■□□□□ 0.21
GABPB1-202ENST00000359031 GTPBP10A4D1E9 387 aaKnown RBP16.34■□□□□ 0.21
GABPB1-202ENST00000359031 CTAGE15A4D2H0 777 aa16.34■□□□□ 0.21
GABPB1-202ENST00000359031 ZBTB39O15060 712 aa16.34■□□□□ 0.21
GABPB1-202ENST00000359031 CTAGE8P0CG41 777 aa16.34■□□□□ 0.21
GABPB1-202ENST00000359031 MAPTP10636 758 aaKnown RBP16.34■□□□□ 0.21
GABPB1-202ENST00000359031 EIF2AK2P19525 551 aaKnown RBP16.34■□□□□ 0.21
GABPB1-202ENST00000359031 JAK3P52333 1124 aa16.34■□□□□ 0.21
GABPB1-202ENST00000359031 TDRD12Q587J7 1177 aaKnown RBP16.34■□□□□ 0.21
GABPB1-202ENST00000359031 PADI6Q6TGC4 694 aa16.34■□□□□ 0.21
GABPB1-202ENST00000359031 TMCO3Q6UWJ1 677 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms