RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 RIT2Q99578 217 aa13.94□□□□□ -0.18
GGPS1-202ENST00000358966 TUFT1Q9NNX1 390 aa13.94□□□□□ -0.18
GGPS1-202ENST00000358966 MED4Q9NPJ6 270 aa13.94□□□□□ -0.18
GGPS1-202ENST00000358966 GPRC5CQ9NQ84 441 aa13.94□□□□□ -0.18
GGPS1-202ENST00000358966 USO1O60763 962 aaKnown RBP13.93□□□□□ -0.18
GGPS1-202ENST00000358966 PGK2P07205 417 aa13.93□□□□□ -0.18
GGPS1-202ENST00000358966 SP2Q02086 613 aa13.93□□□□□ -0.18
GGPS1-202ENST00000358966 BMS1Q14692 1282 aaKnown RBP13.93□□□□□ -0.18
GGPS1-202ENST00000358966 TTC31Q49AM3 519 aaPredicted RBP13.93□□□□□ -0.18
GGPS1-202ENST00000358966 WDR78Q5VTH9 848 aa13.93□□□□□ -0.18
GGPS1-202ENST00000358966 LBX2Q6XYB7 198 aa13.93□□□□□ -0.18
GGPS1-202ENST00000358966 USP50Q70EL3 339 aaPredicted RBP13.93□□□□□ -0.18
GGPS1-202ENST00000358966 CCDC91Q7Z6B0 441 aa13.93□□□□□ -0.18
GGPS1-202ENST00000358966 SRLQ86TD4 932 aa13.93□□□□□ -0.18
GGPS1-202ENST00000358966 HTTP42858 3142 aa13.93□□□□□ -0.18
GGPS1-202ENST00000358966 RBAK-RBAKDNI3L0D1 243 aa13.93□□□□□ -0.18
GGPS1-202ENST00000358966 CYP2C8P10632 490 aa13.93□□□□□ -0.18
GGPS1-202ENST00000358966 BCRP11274 1271 aa13.93□□□□□ -0.18
GGPS1-202ENST00000358966 KRT9P35527 623 aa13.93□□□□□ -0.18
GGPS1-202ENST00000358966 ZSCAN26Q16670 478 aa13.93□□□□□ -0.18
GGPS1-202ENST00000358966 Q3C1V9 767 aa13.93□□□□□ -0.18
GGPS1-202ENST00000358966 ERO1BQ86YB8 467 aa13.93□□□□□ -0.18
GGPS1-202ENST00000358966 RBM46Q8TBY0 533 aaKnown RBP13.93□□□□□ -0.18
GGPS1-202ENST00000358966 CHP1Q99653 195 aa13.93□□□□□ -0.18
GGPS1-202ENST00000358966 CRACR2AQ9BSW2 395 aa13.93□□□□□ -0.18
GGPS1-202ENST00000358966 FAM207AQ9NSI2 230 aaPredicted RBP13.93□□□□□ -0.18
GGPS1-202ENST00000358966 A0A0G2JLL6 359 aaPredicted RBP13.92□□□□□ -0.18
GGPS1-202ENST00000358966 TISP43B9A030 160 aa13.92□□□□□ -0.18
GGPS1-202ENST00000358966 FANCGO15287 622 aa13.92□□□□□ -0.18
GGPS1-202ENST00000358966 FAM13AO94988 1023 aa13.92□□□□□ -0.18
GGPS1-202ENST00000358966 NF2P35240 595 aa13.92□□□□□ -0.18
GGPS1-202ENST00000358966 ERVK-24P63145 666 aa13.92□□□□□ -0.18
GGPS1-202ENST00000358966 PSMD2Q13200 908 aa13.92□□□□□ -0.18
GGPS1-202ENST00000358966 COBLL1Q53SF7 1204 aa13.92□□□□□ -0.18
GGPS1-202ENST00000358966 SEPT14Q6ZU15 432 aa13.92□□□□□ -0.18
GGPS1-202ENST00000358966 PRRT2Q7Z6L0 340 aaPredicted RBP13.92□□□□□ -0.18
GGPS1-202ENST00000358966 DAW1Q8N136 415 aa13.92□□□□□ -0.18
GGPS1-202ENST00000358966 RRP15Q9Y3B9 282 aaKnown RBP13.92□□□□□ -0.18
GGPS1-202ENST00000358966 ARHGEF35A5YM69 484 aa13.92□□□□□ -0.18
GGPS1-202ENST00000358966 SPDYE5A6NIY4 337 aa13.92□□□□□ -0.18
GGPS1-202ENST00000358966 ABL1P00519 1130 aa13.92□□□□□ -0.18
GGPS1-202ENST00000358966 CCND2P30279 289 aa13.92□□□□□ -0.18
GGPS1-202ENST00000358966 CASP4P49662 377 aa13.92□□□□□ -0.18
GGPS1-202ENST00000358966 HERVK_113P62684 666 aa13.92□□□□□ -0.18
GGPS1-202ENST00000358966 NSUN6Q8TEA1 469 aaKnown RBP13.92□□□□□ -0.18
GGPS1-202ENST00000358966 IRX2Q9BZI1 471 aaPredicted RBP13.92□□□□□ -0.18
GGPS1-202ENST00000358966 ABHD10Q9NUJ1 306 aa13.92□□□□□ -0.18
GGPS1-202ENST00000358966 TFR2Q9UP52 801 aa13.92□□□□□ -0.18
GGPS1-202ENST00000358966 MCM3APO60318 1980 aa13.92□□□□□ -0.18
GGPS1-202ENST00000358966 HIP1RO75146 1068 aa13.92□□□□□ -0.18
GGPS1-202ENST00000358966 TRIM21P19474 475 aaKnown RBP13.92□□□□□ -0.18
GGPS1-202ENST00000358966 NR2F2P24468 414 aa13.92□□□□□ -0.18
GGPS1-202ENST00000358966 GSCP56915 257 aaPredicted RBP13.92□□□□□ -0.18
GGPS1-202ENST00000358966 LRRC63Q05C16 580 aa13.92□□□□□ -0.18
GGPS1-202ENST00000358966 PTPN14Q15678 1187 aa13.92□□□□□ -0.18
GGPS1-202ENST00000358966 CCDC40Q4G0X9 1142 aa13.92□□□□□ -0.18
GGPS1-202ENST00000358966 PADI6Q6TGC4 694 aa13.92□□□□□ -0.18
GGPS1-202ENST00000358966 NYAP1Q6ZVC0 841 aa13.92□□□□□ -0.18
GGPS1-202ENST00000358966 ACRBPQ8NEB7 543 aa13.92□□□□□ -0.18
GGPS1-202ENST00000358966 MNS1Q8NEH6 495 aa13.92□□□□□ -0.18
GGPS1-202ENST00000358966 NACC1Q96RE7 527 aa13.92□□□□□ -0.18
GGPS1-202ENST00000358966 SPATC1LQ9H0A9 340 aa13.92□□□□□ -0.18
GGPS1-202ENST00000358966 TCEAL9Q9UHQ7 104 aa13.92□□□□□ -0.18
GGPS1-202ENST00000358966 BACH1O14867 736 aa13.91□□□□□ -0.18
GGPS1-202ENST00000358966 OAZ1P54368 228 aa13.91□□□□□ -0.18
GGPS1-202ENST00000358966 PPATQ06203 517 aa13.91□□□□□ -0.18
GGPS1-202ENST00000358966 ADAM9Q13443 819 aa13.91□□□□□ -0.18
GGPS1-202ENST00000358966 MOGSQ13724 837 aa13.91□□□□□ -0.18
GGPS1-202ENST00000358966 ODR4Q5SWX8 454 aa13.91□□□□□ -0.18
GGPS1-202ENST00000358966 TEX35Q5T0J7 233 aa13.91□□□□□ -0.18
GGPS1-202ENST00000358966 FIZ1Q96SL8 496 aa13.91□□□□□ -0.18
GGPS1-202ENST00000358966 TSG101Q99816 390 aa13.91□□□□□ -0.18
GGPS1-202ENST00000358966 KIFC3Q9BVG8 833 aa13.91□□□□□ -0.18
GGPS1-202ENST00000358966 MOV10L1Q9BXT6 1211 aaKnown RBP13.91□□□□□ -0.18
GGPS1-202ENST00000358966 NDST4Q9H3R1 872 aa13.91□□□□□ -0.18
GGPS1-202ENST00000358966 PPP2R2CQ9Y2T4 447 aa13.91□□□□□ -0.18
GGPS1-202ENST00000358966 POLR3GO15318 223 aaPredicted RBP13.91□□□□□ -0.18
GGPS1-202ENST00000358966 P4HBP07237 508 aaKnown RBP13.91□□□□□ -0.18
GGPS1-202ENST00000358966 FDX1P10109 184 aa13.91□□□□□ -0.18
GGPS1-202ENST00000358966 KCNA2P16389 499 aa13.91□□□□□ -0.18
GGPS1-202ENST00000358966 YWHABP31946 246 aaKnown RBP13.91□□□□□ -0.18
GGPS1-202ENST00000358966 RARRES1P49788 294 aa13.91□□□□□ -0.18
GGPS1-202ENST00000358966 FKBP3Q00688 224 aaKnown RBP13.91□□□□□ -0.18
GGPS1-202ENST00000358966 MAPK7Q13164 816 aa13.91□□□□□ -0.18
GGPS1-202ENST00000358966 INPP4AQ96PE3 977 aaPredicted RBP13.91□□□□□ -0.18
GGPS1-202ENST00000358966 WDR81Q562E7 1941 aa13.91□□□□□ -0.18
GGPS1-202ENST00000358966 ITIH6Q6UXX5 1313 aa13.9□□□□□ -0.18
GGPS1-202ENST00000358966 ATP2A1O14983 1001 aa13.9□□□□□ -0.18
GGPS1-202ENST00000358966 ARHGAP6O43182 974 aa13.9□□□□□ -0.18
GGPS1-202ENST00000358966 ZNF862O60290 1169 aa13.9□□□□□ -0.18
GGPS1-202ENST00000358966 CNMDO75829 334 aa13.9□□□□□ -0.18
GGPS1-202ENST00000358966 QARSP47897 775 aaKnown RBP13.9□□□□□ -0.18
GGPS1-202ENST00000358966 ELF2Q15723 593 aa13.9□□□□□ -0.18
GGPS1-202ENST00000358966 VWA3BQ502W6 1294 aa13.9□□□□□ -0.18
GGPS1-202ENST00000358966 EPM2AIP1Q7L775 607 aaPredicted RBP13.9□□□□□ -0.18
GGPS1-202ENST00000358966 NLRX1Q86UT6 975 aa13.9□□□□□ -0.18
GGPS1-202ENST00000358966 REXO1L1PQ8IX06 675 aa13.9□□□□□ -0.18
GGPS1-202ENST00000358966 ZSWIM4Q9H7M6 989 aa13.9□□□□□ -0.18
GGPS1-202ENST00000358966 PARVGQ9HBI0 331 aa13.9□□□□□ -0.18
GGPS1-202ENST00000358966 ZNF215Q9UL58 517 aaPredicted RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms