RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 A6NJR5 290 aa14.78□□□□□ -0.04
VCP-201ENST00000358901 OSTNP61366 133 aa14.78□□□□□ -0.04
VCP-201ENST00000358901 DPYDQ12882 1025 aa14.78□□□□□ -0.04
VCP-201ENST00000358901 ZNF746Q6NUN9 644 aaPredicted RBP14.78□□□□□ -0.04
VCP-201ENST00000358901 MMS22LQ6ZRQ5 1243 aa14.78□□□□□ -0.04
VCP-201ENST00000358901 SESTD1Q86VW0 696 aa14.78□□□□□ -0.04
VCP-201ENST00000358901 FAM81BQ96LP2 452 aa14.78□□□□□ -0.04
VCP-201ENST00000358901 PHF20Q9BVI0 1012 aa14.78□□□□□ -0.04
VCP-201ENST00000358901 NARFQ9UHQ1 456 aa14.78□□□□□ -0.04
VCP-201ENST00000358901 SNX12Q9UMY4 172 aa14.78□□□□□ -0.04
VCP-201ENST00000358901 MCF2LO15068 1137 aa14.78□□□□□ -0.04
VCP-201ENST00000358901 STAT3P40763 770 aa14.78□□□□□ -0.04
VCP-201ENST00000358901 STK4Q13043 487 aa14.78□□□□□ -0.04
VCP-201ENST00000358901 GLYCTKQ8IVS8 523 aa14.78□□□□□ -0.04
VCP-201ENST00000358901 NEDD1Q8NHV4 660 aa14.78□□□□□ -0.04
VCP-201ENST00000358901 SCYL1Q96KG9 808 aa14.78□□□□□ -0.04
VCP-201ENST00000358901 NACA2Q9H009 215 aa14.78□□□□□ -0.04
VCP-201ENST00000358901 E9PCH4 1651 aa14.77□□□□□ -0.04
VCP-201ENST00000358901 ZNF233A6NK53 670 aa14.77□□□□□ -0.04
VCP-201ENST00000358901 SERPINB6P35237 376 aa14.77□□□□□ -0.04
VCP-201ENST00000358901 NYAP1Q6ZVC0 841 aa14.77□□□□□ -0.04
VCP-201ENST00000358901 XXYLT1Q8NBI6 393 aa14.77□□□□□ -0.04
VCP-201ENST00000358901 MED10Q9BTT4 135 aa14.77□□□□□ -0.04
VCP-201ENST00000358901 SYNGAP1Q96PV0 1343 aa14.77□□□□□ -0.04
VCP-201ENST00000358901 POLR1AO95602 1720 aaPredicted RBP14.77□□□□□ -0.04
VCP-201ENST00000358901 K7ERI5 159 aa14.77□□□□□ -0.05
VCP-201ENST00000358901 ZRANB2O95218 330 aaKnown RBP eCLIP14.77□□□□□ -0.05
VCP-201ENST00000358901 DRAP1Q14919 205 aaPredicted RBP14.77□□□□□ -0.05
VCP-201ENST00000358901 QRICH1Q2TAL8 776 aa14.77□□□□□ -0.05
VCP-201ENST00000358901 FAM160B1Q5W0V3 765 aa14.77□□□□□ -0.05
VCP-201ENST00000358901 FAM47EQ6ZV65 393 aa14.77□□□□□ -0.05
VCP-201ENST00000358901 FAM20AQ96MK3 541 aa14.77□□□□□ -0.05
VCP-201ENST00000358901 TAF1DQ9H5J8 278 aaPredicted RBP14.77□□□□□ -0.05
VCP-201ENST00000358901 MLXIPLQ9NP71 852 aa14.77□□□□□ -0.05
VCP-201ENST00000358901 IRX4P78413 519 aa14.77□□□□□ -0.05
VCP-201ENST00000358901 PDIK1LQ8N165 341 aa14.77□□□□□ -0.05
VCP-201ENST00000358901 RIN2Q8WYP3 895 aaPredicted RBP14.77□□□□□ -0.05
VCP-201ENST00000358901 GPC5P78333 572 aa14.76□□□□□ -0.05
VCP-201ENST00000358901 GABPAQ06546 454 aa14.76□□□□□ -0.05
VCP-201ENST00000358901 SEPT6Q14141 434 aa14.76□□□□□ -0.05
VCP-201ENST00000358901 ZNF394Q53GI3 561 aa14.76□□□□□ -0.05
VCP-201ENST00000358901 SH2D4BQ5SQS7 431 aa14.76□□□□□ -0.05
VCP-201ENST00000358901 C12orf60Q5U649 245 aa14.76□□□□□ -0.05
VCP-201ENST00000358901 PDXDC2PQ6P474 469 aa14.76□□□□□ -0.05
VCP-201ENST00000358901 GADL1Q6ZQY3 521 aa14.76□□□□□ -0.05
VCP-201ENST00000358901 NSUN4Q96CB9 384 aaKnown RBP14.76□□□□□ -0.05
VCP-201ENST00000358901 HPS5Q9UPZ3 1129 aa14.76□□□□□ -0.05
VCP-201ENST00000358901 LUC7L3O95232 432 aaKnown RBP14.76□□□□□ -0.05
VCP-201ENST00000358901 RNASELQ05823 741 aaKnown RBP14.76□□□□□ -0.05
VCP-201ENST00000358901 PDZD4Q76G19 769 aaPredicted RBP14.76□□□□□ -0.05
VCP-201ENST00000358901 EEPD1Q7L9B9 569 aa14.76□□□□□ -0.05
VCP-201ENST00000358901 ZBTB33Q86T24 672 aa14.76□□□□□ -0.05
VCP-201ENST00000358901 PITPNM3Q9BZ71 974 aa14.76□□□□□ -0.05
VCP-201ENST00000358901 EPB41L4AQ9HCS5 686 aaPredicted RBP14.76□□□□□ -0.05
VCP-201ENST00000358901 ADAM22Q9P0K1 906 aa14.76□□□□□ -0.05
VCP-201ENST00000358901 GMNCA6NCL1 334 aa14.76□□□□□ -0.05
VCP-201ENST00000358901 TRIM49P0CI25 452 aa14.76□□□□□ -0.05
VCP-201ENST00000358901 TRIM49CP0CI26 452 aa14.76□□□□□ -0.05
VCP-201ENST00000358901 HDLBPQ00341 1268 aaKnown RBP14.76□□□□□ -0.05
VCP-201ENST00000358901 PDXDC1Q6P996 788 aa14.76□□□□□ -0.05
VCP-201ENST00000358901 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.76□□□□□ -0.05
VCP-201ENST00000358901 C7orf31Q8N865 590 aa14.76□□□□□ -0.05
VCP-201ENST00000358901 PYROXD1Q8WU10 500 aa14.76□□□□□ -0.05
VCP-201ENST00000358901 CDHR1Q96JP9 859 aa14.76□□□□□ -0.05
VCP-201ENST00000358901 APOL6Q9BWW8 343 aa14.76□□□□□ -0.05
VCP-201ENST00000358901 AMACRQ9UHK6 382 aa14.76□□□□□ -0.05
VCP-201ENST00000358901 GYPCP04921 128 aa14.76□□□□□ -0.05
VCP-201ENST00000358901 ALCAMQ13740 583 aa14.76□□□□□ -0.05
VCP-201ENST00000358901 PDIA6Q15084 440 aa14.76□□□□□ -0.05
VCP-201ENST00000358901 NAALADL2Q58DX5 795 aa14.76□□□□□ -0.05
VCP-201ENST00000358901 DARS2Q6PI48 645 aaKnown RBP14.76□□□□□ -0.05
VCP-201ENST00000358901 TMED8Q6PL24 325 aaPredicted RBP14.76□□□□□ -0.05
VCP-201ENST00000358901 PADI6Q6TGC4 694 aa14.76□□□□□ -0.05
VCP-201ENST00000358901 ANKRD36BP1Q96IX9 119 aa14.76□□□□□ -0.05
VCP-201ENST00000358901 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.76□□□□□ -0.051e-6■■■□□ 16
VCP-201ENST00000358901 PLA2G12BQ9BX93 195 aa14.76□□□□□ -0.05
VCP-201ENST00000358901 CPP00450 1065 aa14.75□□□□□ -0.05
VCP-201ENST00000358901 SRGNP10124 158 aa14.75□□□□□ -0.05
VCP-201ENST00000358901 ACTN1P12814 892 aa14.75□□□□□ -0.05
VCP-201ENST00000358901 IFRD2Q12894 506 aaPredicted RBP14.75□□□□□ -0.05
VCP-201ENST00000358901 SCARA5Q6ZMJ2 495 aa14.75□□□□□ -0.05
VCP-201ENST00000358901 FAM160B2Q86V87 743 aa14.75□□□□□ -0.05
VCP-201ENST00000358901 SRRM1Q8IYB3 904 aaKnown RBP14.75□□□□□ -0.05
VCP-201ENST00000358901 ADGRF4Q8IZF3 695 aa14.75□□□□□ -0.05
VCP-201ENST00000358901 CCNYQ8ND76 341 aa14.75□□□□□ -0.05
VCP-201ENST00000358901 BANK1Q8NDB2 785 aa14.75□□□□□ -0.05
VCP-201ENST00000358901 KAZALD1Q96I82 304 aa14.75□□□□□ -0.05
VCP-201ENST00000358901 EDEM3Q9BZQ6 932 aa14.75□□□□□ -0.05
VCP-201ENST00000358901 SMYD2Q9NRG4 433 aa14.75□□□□□ -0.05
VCP-201ENST00000358901 TXLNGQ9NUQ3 528 aa14.75□□□□□ -0.05
VCP-201ENST00000358901 TSPOAP1O95153 1857 aa14.75□□□□□ -0.05
VCP-201ENST00000358901 REREQ9P2R6 1566 aa14.75□□□□□ -0.05
VCP-201ENST00000358901 PTPRMP28827 1452 aa14.75□□□□□ -0.05
VCP-201ENST00000358901 COL15A1P39059 1388 aa14.75□□□□□ -0.05
VCP-201ENST00000358901 F5H6K3 240 aa14.75□□□□□ -0.05
VCP-201ENST00000358901 M0QZ92 97 aa14.75□□□□□ -0.05
VCP-201ENST00000358901 FTLP02792 175 aaPredicted RBP14.75□□□□□ -0.05
VCP-201ENST00000358901 KLRC3Q07444 240 aa14.75□□□□□ -0.05
VCP-201ENST00000358901 SEMA3FQ13275 785 aa14.75□□□□□ -0.05
VCP-201ENST00000358901 ORC2Q13416 577 aaPredicted RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms