RNA–Protein interactions for RNA: ENST00000358540.6

PTPN5-201, Transcript of protein tyrosine phosphatase, non-receptor type 5, humanhuman

TSL 1 (best) BASIC

Gene PTPN5, Length 3,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5-201ENST00000358540 KIF5AQ12840 1032 aa17.56■□□□□ 0.4
PTPN5-201ENST00000358540 PPP2R5CQ13362 524 aa17.56■□□□□ 0.4
PTPN5-201ENST00000358540 COG2Q14746 738 aa17.56■□□□□ 0.4
PTPN5-201ENST00000358540 CEP112Q8N8E3 955 aa17.56■□□□□ 0.4
PTPN5-201ENST00000358540 NOA1Q8NC60 698 aaKnown RBP17.56■□□□□ 0.4
PTPN5-201ENST00000358540 LXNQ9BS40 222 aa17.56■□□□□ 0.4
PTPN5-201ENST00000358540 PCDHA13Q9Y5I0 950 aa17.56■□□□□ 0.4
PTPN5-201ENST00000358540 EPM2AIP1Q7L775 607 aaPredicted RBP17.56■□□□□ 0.4
PTPN5-201ENST00000358540 CLEC4DQ8WXI8 215 aa17.56■□□□□ 0.4
PTPN5-201ENST00000358540 EHMT1Q9H9B1 1298 aa17.56■□□□□ 0.4
PTPN5-201ENST00000358540 L1RE1Q9UN81 338 aa17.56■□□□□ 0.4
PTPN5-201ENST00000358540 CAPN6Q9Y6Q1 641 aa17.56■□□□□ 0.4
PTPN5-201ENST00000358540 ZNF185O15231 689 aa17.55■□□□□ 0.4
PTPN5-201ENST00000358540 SLC26A4O43511 780 aa17.55■□□□□ 0.4
PTPN5-201ENST00000358540 TLR2O60603 784 aa17.55■□□□□ 0.4
PTPN5-201ENST00000358540 NR3C1P04150 777 aa17.55■□□□□ 0.4
PTPN5-201ENST00000358540 SLC9A1P19634 815 aa17.55■□□□□ 0.4
PTPN5-201ENST00000358540 TNIP1Q15025 636 aa17.55■□□□□ 0.4
PTPN5-201ENST00000358540 PRPF38AQ8NAV1 312 aaKnown RBP17.55■□□□□ 0.4
PTPN5-201ENST00000358540 TEKT3Q9BXF9 490 aa17.55■□□□□ 0.4
PTPN5-201ENST00000358540 DEFB129Q9H1M3 183 aa17.55■□□□□ 0.4
PTPN5-201ENST00000358540 ARMCX3Q9UH62 379 aaPredicted RBP17.55■□□□□ 0.4
PTPN5-201ENST00000358540 TULP1O00294 542 aaPredicted RBP17.55■□□□□ 0.4
PTPN5-201ENST00000358540 MOCS3O95396 460 aa17.55■□□□□ 0.4
PTPN5-201ENST00000358540 HNRNPH3P31942 346 aaKnown RBP17.55■□□□□ 0.4
PTPN5-201ENST00000358540 TGFB2P61812 414 aa17.55■□□□□ 0.4
PTPN5-201ENST00000358540 SPP2Q13103 211 aa17.55■□□□□ 0.4
PTPN5-201ENST00000358540 EDRF1Q3B7T1 1238 aa17.55■□□□□ 0.4
PTPN5-201ENST00000358540 C1orf186Q6ZWK4 172 aa17.55■□□□□ 0.4
PTPN5-201ENST00000358540 ZKSCAN4Q969J2 545 aaPredicted RBP17.55■□□□□ 0.4
PTPN5-201ENST00000358540 PSMB7Q99436 277 aa17.55■□□□□ 0.4
PTPN5-201ENST00000358540 MXRA8Q9BRK3 442 aa17.55■□□□□ 0.4
PTPN5-201ENST00000358540 KCNH7Q9NS40 1196 aa17.55■□□□□ 0.4
PTPN5-201ENST00000358540 CNOT7Q9UIV1 285 aaKnown RBP17.55■□□□□ 0.4
PTPN5-201ENST00000358540 SAMM50Q9Y512 469 aa17.55■□□□□ 0.4
PTPN5-201ENST00000358540 FAM170AA1A519 330 aa17.54■□□□□ 0.4
PTPN5-201ENST00000358540 CTAGE15A4D2H0 777 aa17.54■□□□□ 0.4
PTPN5-201ENST00000358540 TMEM150BA6NC51 233 aa17.54■□□□□ 0.4
PTPN5-201ENST00000358540 GNA14O95837 355 aa17.54■□□□□ 0.4
PTPN5-201ENST00000358540 CTAGE8P0CG41 777 aa17.54■□□□□ 0.4
PTPN5-201ENST00000358540 VCAM1P19320 739 aa17.54■□□□□ 0.4
PTPN5-201ENST00000358540 CTAGE6Q86UF2 777 aa17.54■□□□□ 0.4
PTPN5-201ENST00000358540 CTAGE4Q8IX94 777 aa17.54■□□□□ 0.4
PTPN5-201ENST00000358540 MICALL1Q8N3F8 863 aa17.54■□□□□ 0.4
PTPN5-201ENST00000358540 FAM133AQ8N9E0 248 aa17.54■□□□□ 0.4
PTPN5-201ENST00000358540 HNRNPLLQ8WVV9 542 aaKnown RBP17.54■□□□□ 0.4
PTPN5-201ENST00000358540 TUFT1Q9NNX1 390 aa17.54■□□□□ 0.4
PTPN5-201ENST00000358540 RPS6KA5O75582 802 aa17.54■□□□□ 0.4
PTPN5-201ENST00000358540 MYCLP12524 364 aaPredicted RBP17.54■□□□□ 0.4
PTPN5-201ENST00000358540 CDK17Q00537 523 aa17.54■□□□□ 0.4
PTPN5-201ENST00000358540 MAP3K10Q02779 954 aa17.54■□□□□ 0.4
PTPN5-201ENST00000358540 CASP8Q14790 479 aa17.54■□□□□ 0.4
PTPN5-201ENST00000358540 HGSNATQ68CP4 663 aa17.54■□□□□ 0.4
PTPN5-201ENST00000358540 NSMFQ6X4W1 530 aa17.54■□□□□ 0.4
PTPN5-201ENST00000358540 VPS33BQ9H267 617 aa17.54■□□□□ 0.4
PTPN5-201ENST00000358540 TRAF3IP3Q9Y228 551 aa17.54■□□□□ 0.4
PTPN5-201ENST00000358540 SFMBT2Q5VUG0 894 aa17.54■□□□□ 0.4
PTPN5-201ENST00000358540 TRAPPC11Q7Z392 1133 aa17.54■□□□□ 0.4
PTPN5-201ENST00000358540 TAAR1Q96RJ0 339 aa17.54■□□□□ 0.4
PTPN5-201ENST00000358540 RPAP3Q9H6T3 665 aaPredicted RBP17.54■□□□□ 0.4
PTPN5-201ENST00000358540 FAM204AQ9H8W3 233 aa17.54■□□□□ 0.4
PTPN5-201ENST00000358540 CEP72Q9P209 647 aa17.54■□□□□ 0.4
PTPN5-201ENST00000358540 WDR46O15213 610 aaKnown RBP17.53■□□□□ 0.4
PTPN5-201ENST00000358540 CALUO43852 315 aaPredicted RBP17.53■□□□□ 0.4
PTPN5-201ENST00000358540 PLA2G6O60733 806 aa17.53■□□□□ 0.4
PTPN5-201ENST00000358540 MAGEA1P43355 309 aa17.53■□□□□ 0.4
PTPN5-201ENST00000358540 HSD17B4P51659 736 aa17.53■□□□□ 0.4
PTPN5-201ENST00000358540 TNFAIP1Q13829 316 aa17.53■□□□□ 0.4
PTPN5-201ENST00000358540 FOXR2Q6PJQ5 311 aa17.53■□□□□ 0.4
PTPN5-201ENST00000358540 PPP4R3CPQ6ZMV5 832 aa17.53■□□□□ 0.4
PTPN5-201ENST00000358540 DNAAF5Q86Y56 855 aa17.53■□□□□ 0.4
PTPN5-201ENST00000358540 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.53■□□□□ 0.4
PTPN5-201ENST00000358540 JADE2Q9NQC1 790 aa17.53■□□□□ 0.4
PTPN5-201ENST00000358540 SALL4Q9UJQ4 1053 aa17.53■□□□□ 0.4
PTPN5-201ENST00000358540 CTDP1Q9Y5B0 961 aaPredicted RBP17.53■□□□□ 0.4
PTPN5-201ENST00000358540 TGFB1I1O43294 461 aa17.53■□□□□ 0.4
PTPN5-201ENST00000358540 BUB1O43683 1085 aa17.53■□□□□ 0.4
PTPN5-201ENST00000358540 MMS19Q96T76 1030 aa17.53■□□□□ 0.4
PTPN5-201ENST00000358540 PARVGQ9HBI0 331 aa17.53■□□□□ 0.4
PTPN5-201ENST00000358540 TYW1Q9NV66 732 aaKnown RBP17.53■□□□□ 0.4
PTPN5-201ENST00000358540 STK24Q9Y6E0 443 aa17.53■□□□□ 0.4
PTPN5-201ENST00000358540 MARSP56192 900 aaKnown RBP17.52■□□□□ 0.4
PTPN5-201ENST00000358540 ZNF280AP59817 542 aaPredicted RBP17.52■□□□□ 0.4
PTPN5-201ENST00000358540 RPS6P62753 249 aaKnown RBP17.52■□□□□ 0.4
PTPN5-201ENST00000358540 VSNL1P62760 191 aa17.52■□□□□ 0.4
PTPN5-201ENST00000358540 ITGB3BPQ13352 177 aaPredicted RBP17.52■□□□□ 0.4
PTPN5-201ENST00000358540 PRKG1Q13976 671 aa17.52■□□□□ 0.4
PTPN5-201ENST00000358540 WHAMMP3Q1A5X7 153 aa17.52■□□□□ 0.4
PTPN5-201ENST00000358540 MIER3Q7Z3K6 550 aa17.52■□□□□ 0.4
PTPN5-201ENST00000358540 ZC3H3Q8IXZ2 948 aaKnown RBP17.52■□□□□ 0.4
PTPN5-201ENST00000358540 SYTL5Q8TDW5 730 aaPredicted RBP17.52■□□□□ 0.4
PTPN5-201ENST00000358540 ATG4CQ96DT6 458 aa17.52■□□□□ 0.4
PTPN5-201ENST00000358540 SAR1BQ9Y6B6 198 aa17.52■□□□□ 0.4
PTPN5-201ENST00000358540 ZMYM2Q9UBW7 1377 aa17.52■□□□□ 0.4
PTPN5-201ENST00000358540 PDXKO00764 312 aa17.52■□□□□ 0.4
PTPN5-201ENST00000358540 XRCC5P13010 732 aaKnown RBP17.52■□□□□ 0.4
PTPN5-201ENST00000358540 HOXA7P31268 230 aaPredicted RBP17.52■□□□□ 0.4
PTPN5-201ENST00000358540 CYP2J2P51589 502 aa17.52■□□□□ 0.4
PTPN5-201ENST00000358540 MRPS9P82933 396 aaKnown RBP17.52■□□□□ 0.4
PTPN5-201ENST00000358540 ODR4Q5SWX8 454 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms