RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 IP6K1Q92551 441 aa9.39□□□□□ -0.91
COL6A6-201ENST00000358511 SNF8Q96H20 258 aa9.39□□□□□ -0.91
COL6A6-201ENST00000358511 SAMD9LQ8IVG5 1584 aa9.39□□□□□ -0.91
COL6A6-201ENST00000358511 UBN2Q6ZU65 1347 aa9.39□□□□□ -0.91
COL6A6-201ENST00000358511 GGPS1O95749 300 aa9.39□□□□□ -0.91
COL6A6-201ENST00000358511 NR5A1Q13285 461 aa9.39□□□□□ -0.91
COL6A6-201ENST00000358511 RFX6Q8HWS3 928 aa9.39□□□□□ -0.91
COL6A6-201ENST00000358511 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.39□□□□□ -0.91
COL6A6-201ENST00000358511 MLH3Q9UHC1 1453 aa9.39□□□□□ -0.91
COL6A6-201ENST00000358511 GOLGA8CPA6NN73 597 aa9.39□□□□□ -0.91
COL6A6-201ENST00000358511 RAP1GDS1P52306 607 aa9.39□□□□□ -0.91
COL6A6-201ENST00000358511 SH2D3CQ8N5H7 860 aa9.39□□□□□ -0.91
COL6A6-201ENST00000358511 SAYSD1Q9NPB0 183 aa9.39□□□□□ -0.91
COL6A6-201ENST00000358511 IL1RAPL1Q9NZN1 696 aa9.39□□□□□ -0.91
COL6A6-201ENST00000358511 SEMA3FQ13275 785 aa9.39□□□□□ -0.91
COL6A6-201ENST00000358511 ZNF219Q9P2Y4 722 aaPredicted RBP9.39□□□□□ -0.91
COL6A6-201ENST00000358511 KRT14P02533 472 aa9.38□□□□□ -0.91
COL6A6-201ENST00000358511 TMOD1P28289 359 aa9.38□□□□□ -0.91
COL6A6-201ENST00000358511 KCTD6Q8NC69 237 aa9.38□□□□□ -0.91
COL6A6-201ENST00000358511 FAM210AQ96ND0 272 aa9.38□□□□□ -0.91
COL6A6-201ENST00000358511 L2HGDHQ9H9P8 463 aa9.38□□□□□ -0.91
COL6A6-201ENST00000358511 PAPOLBQ9NRJ5 636 aaKnown RBP9.38□□□□□ -0.91
COL6A6-201ENST00000358511 SH2B2O14492 632 aaPredicted RBP9.38□□□□□ -0.91
COL6A6-201ENST00000358511 CHN1P15882 459 aa9.38□□□□□ -0.91
COL6A6-201ENST00000358511 IFNAR1P17181 557 aa9.38□□□□□ -0.91
COL6A6-201ENST00000358511 OCRLQ01968 901 aa9.38□□□□□ -0.91
COL6A6-201ENST00000358511 CEP55Q53EZ4 464 aa9.38□□□□□ -0.91
COL6A6-201ENST00000358511 MAML3Q96JK9 1138 aa9.38□□□□□ -0.91
COL6A6-201ENST00000358511 A0A1W2PQC6 194 aa9.38□□□□□ -0.91
COL6A6-201ENST00000358511 LRRC53A6NM62 1247 aa9.38□□□□□ -0.91
COL6A6-201ENST00000358511 H3BRJ5 948 aa9.38□□□□□ -0.91
COL6A6-201ENST00000358511 MARK3P27448 753 aa9.38□□□□□ -0.91
COL6A6-201ENST00000358511 ARFIP2P53365 341 aa9.38□□□□□ -0.91
COL6A6-201ENST00000358511 LRRC8BQ6P9F7 803 aa9.38□□□□□ -0.91
COL6A6-201ENST00000358511 TRIM59Q8IWR1 403 aa9.38□□□□□ -0.91
COL6A6-201ENST00000358511 FBXL13Q8NEE6 735 aa9.38□□□□□ -0.91
COL6A6-201ENST00000358511 SLC26A7Q8TE54 656 aa9.38□□□□□ -0.91
COL6A6-201ENST00000358511 DDX28Q9NUL7 540 aaKnown RBP9.38□□□□□ -0.91
COL6A6-201ENST00000358511 LCMT1Q9UIC8 334 aa9.38□□□□□ -0.91
COL6A6-201ENST00000358511 TLK1Q9UKI8 766 aa9.38□□□□□ -0.91
COL6A6-201ENST00000358511 E9PCH4 1651 aa9.38□□□□□ -0.91
COL6A6-201ENST00000358511 CPSF1Q10570 1443 aaKnown RBP9.38□□□□□ -0.91
COL6A6-201ENST00000358511 KLRF2D3W0D1 207 aa9.38□□□□□ -0.91
COL6A6-201ENST00000358511 HSPA4LO95757 839 aa9.38□□□□□ -0.91
COL6A6-201ENST00000358511 ODR4Q5SWX8 454 aa9.38□□□□□ -0.91
COL6A6-201ENST00000358511 SUGP1Q8IWZ8 645 aaKnown RBP9.38□□□□□ -0.91
COL6A6-201ENST00000358511 TAB3Q8N5C8 712 aaPredicted RBP9.38□□□□□ -0.91
COL6A6-201ENST00000358511 LIG4P49917 911 aa9.38□□□□□ -0.91
COL6A6-201ENST00000358511 BTBD6Q96KE9 485 aa9.38□□□□□ -0.91
COL6A6-201ENST00000358511 KDM4CQ9H3R0 1056 aa9.38□□□□□ -0.91
COL6A6-201ENST00000358511 MLXIPQ9HAP2 919 aa9.38□□□□□ -0.91
COL6A6-201ENST00000358511 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.38□□□□□ -0.91
COL6A6-201ENST00000358511 LPXNO60711 386 aa9.38□□□□□ -0.91
COL6A6-201ENST00000358511 DAB1O75553 588 aa9.38□□□□□ -0.91
COL6A6-201ENST00000358511 UBE3CQ15386 1083 aa9.38□□□□□ -0.91
COL6A6-201ENST00000358511 RNF207Q6ZRF8 634 aa9.38□□□□□ -0.91
COL6A6-201ENST00000358511 SMCR8Q8TEV9 937 aaPredicted RBP9.38□□□□□ -0.91
COL6A6-201ENST00000358511 GIPC2Q8TF65 315 aa9.38□□□□□ -0.91
COL6A6-201ENST00000358511 FAM187AA6NFU0 413 aa9.38□□□□□ -0.91
COL6A6-201ENST00000358511 SERPINB2P05120 415 aa9.38□□□□□ -0.91
COL6A6-201ENST00000358511 KRT8P05787 483 aa9.38□□□□□ -0.91
COL6A6-201ENST00000358511 IQCB1Q15051 598 aa9.38□□□□□ -0.91
COL6A6-201ENST00000358511 PARP10Q53GL7 1025 aa9.38□□□□□ -0.91
COL6A6-201ENST00000358511 FAM102BQ5T8I3 360 aa9.38□□□□□ -0.91
COL6A6-201ENST00000358511 TPTE2Q6XPS3 522 aa9.38□□□□□ -0.91
COL6A6-201ENST00000358511 SIRT2Q8IXJ6 389 aa9.38□□□□□ -0.91
COL6A6-201ENST00000358511 ATG3Q9NT62 314 aa9.38□□□□□ -0.91
COL6A6-201ENST00000358511 LZTS1Q9Y250 596 aa9.38□□□□□ -0.91
COL6A6-201ENST00000358511 PCDHB4Q9Y5E5 795 aa9.38□□□□□ -0.91
COL6A6-201ENST00000358511 IGF2BP3O00425 579 aaKnown RBP eCLIP9.37□□□□□ -0.91
COL6A6-201ENST00000358511 VHLP40337 213 aa9.37□□□□□ -0.91
COL6A6-201ENST00000358511 FLOT2Q14254 428 aa9.37□□□□□ -0.91
COL6A6-201ENST00000358511 CDC37Q16543 378 aaPredicted RBP9.37□□□□□ -0.91
COL6A6-201ENST00000358511 DNAL1Q4LDG9 190 aa9.37□□□□□ -0.91
COL6A6-201ENST00000358511 SPOPLQ6IQ16 392 aa9.37□□□□□ -0.91
COL6A6-201ENST00000358511 SCYL2Q6P3W7 929 aa9.37□□□□□ -0.91
COL6A6-201ENST00000358511 POTEAQ6S8J7 498 aa9.37□□□□□ -0.91
COL6A6-201ENST00000358511 LZICQ8WZA0 190 aa9.37□□□□□ -0.91
COL6A6-201ENST00000358511 RIOK1Q9BRS2 568 aaKnown RBP9.37□□□□□ -0.91
COL6A6-201ENST00000358511 G3BP2Q9UN86 482 aaKnown RBP9.37□□□□□ -0.91
COL6A6-201ENST00000358511 SMG5Q9UPR3 1016 aaKnown RBP9.37□□□□□ -0.91
COL6A6-201ENST00000358511 PCDHB6Q9Y5E3 794 aa9.37□□□□□ -0.91
COL6A6-201ENST00000358511 HIBADHP31937 336 aaKnown RBP9.37□□□□□ -0.91
COL6A6-201ENST00000358511 SLC52A2Q9HAB3 445 aa9.37□□□□□ -0.91
COL6A6-201ENST00000358511 COPRSQ9NQ92 184 aa9.37□□□□□ -0.91
COL6A6-201ENST00000358511 ITGB1BP2Q9UKP3 347 aa9.37□□□□□ -0.91
COL6A6-201ENST00000358511 SNX24Q9Y343 169 aa9.37□□□□□ -0.91
COL6A6-201ENST00000358511 STK36Q9NRP7 1315 aa9.37□□□□□ -0.91
COL6A6-201ENST00000358511 TNRQ92752 1358 aa9.37□□□□□ -0.91
COL6A6-201ENST00000358511 MAST3O60307 1309 aa9.37□□□□□ -0.91
COL6A6-201ENST00000358511 PAPOLAP51003 745 aaKnown RBP9.37□□□□□ -0.91
COL6A6-201ENST00000358511 COPS2P61201 443 aa9.37□□□□□ -0.91
COL6A6-201ENST00000358511 CCDC15Q0P6D6 951 aa9.37□□□□□ -0.91
COL6A6-201ENST00000358511 KIF22Q14807 665 aa9.37□□□□□ -0.91
COL6A6-201ENST00000358511 SLC9A5Q14940 896 aa9.37□□□□□ -0.91
COL6A6-201ENST00000358511 FAM47AQ5JRC9 791 aa9.37□□□□□ -0.91
COL6A6-201ENST00000358511 LRRC59Q96AG4 307 aaKnown RBP9.37□□□□□ -0.91
COL6A6-201ENST00000358511 UIMC1Q96RL1 719 aa9.37□□□□□ -0.91
COL6A6-201ENST00000358511 PITPNM2Q9BZ72 1349 aa9.37□□□□□ -0.91
COL6A6-201ENST00000358511 ADCY3O60266 1144 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms