RNA–Protein interactions for RNA: ENST00000356660.8

BDNF-202, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-202ENST00000356660 EVI5O60447 810 aa13.59□□□□□ -0.23
BDNF-202ENST00000356660 SMIM24O75264 130 aa13.59□□□□□ -0.23
BDNF-202ENST00000356660 MYCLP12524 364 aaPredicted RBP13.59□□□□□ -0.23
BDNF-202ENST00000356660 PMS2P54278 862 aa13.59□□□□□ -0.23
BDNF-202ENST00000356660 MIIPQ5JXC2 388 aa13.59□□□□□ -0.23
BDNF-202ENST00000356660 LRRC34Q8IZ02 419 aa13.59□□□□□ -0.23
BDNF-202ENST00000356660 BARHL2Q9NY43 387 aa13.59□□□□□ -0.23
BDNF-202ENST00000356660 MEGF6O75095 1541 aa13.59□□□□□ -0.23
BDNF-202ENST00000356660 AFPP02771 609 aaKnown RBP13.59□□□□□ -0.23
BDNF-202ENST00000356660 EEF2P13639 858 aaKnown RBP13.59□□□□□ -0.23
BDNF-202ENST00000356660 GBP1P32455 592 aa13.59□□□□□ -0.23
BDNF-202ENST00000356660 EIF3BP55884 814 aaKnown RBP13.59□□□□□ -0.23
BDNF-202ENST00000356660 PREPLQ4J6C6 727 aaPredicted RBP13.59□□□□□ -0.23
BDNF-202ENST00000356660 ZNF449Q6P9G9 518 aa13.59□□□□□ -0.23
BDNF-202ENST00000356660 ECT2Q9H8V3 914 aa13.59□□□□□ -0.23
BDNF-202ENST00000356660 SFI1A8K8P3 1242 aa13.58□□□□□ -0.24
BDNF-202ENST00000356660 FECHP22830 423 aa13.58□□□□□ -0.24
BDNF-202ENST00000356660 POLD1P28340 1107 aa13.58□□□□□ -0.24
BDNF-202ENST00000356660 PRR16Q569H4 304 aa13.58□□□□□ -0.24
BDNF-202ENST00000356660 FIGNQ5HY92 759 aa13.58□□□□□ -0.24
BDNF-202ENST00000356660 TPH2Q8IWU9 490 aa13.58□□□□□ -0.24
BDNF-202ENST00000356660 GDF3Q9NR23 364 aa13.58□□□□□ -0.24
BDNF-202ENST00000356660 CALUO43852 315 aaPredicted RBP13.58□□□□□ -0.24
BDNF-202ENST00000356660 ANP32DO95626 131 aa13.58□□□□□ -0.24
BDNF-202ENST00000356660 MFSD4BQ5TF39 518 aa13.58□□□□□ -0.24
BDNF-202ENST00000356660 GLYCTKQ8IVS8 523 aa13.58□□□□□ -0.24
BDNF-202ENST00000356660 LARGE2Q8N3Y3 721 aa13.58□□□□□ -0.24
BDNF-202ENST00000356660 DNM3Q9UQ16 869 aa13.58□□□□□ -0.24
BDNF-202ENST00000356660 BCS1LQ9Y276 419 aa13.58□□□□□ -0.24
BDNF-202ENST00000356660 PVALEFA0A1B0GWK0 134 aa13.58□□□□□ -0.24
BDNF-202ENST00000356660 CDK17Q00537 523 aa13.58□□□□□ -0.24
BDNF-202ENST00000356660 ITIH3Q06033 890 aa13.58□□□□□ -0.24
BDNF-202ENST00000356660 LRIG3Q6UXM1 1119 aa13.58□□□□□ -0.24
BDNF-202ENST00000356660 BZW2Q9Y6E2 419 aaKnown RBP13.58□□□□□ -0.24
BDNF-202ENST00000356660 NKRFO15226 690 aaKnown RBP eCLIP13.57□□□□□ -0.24
BDNF-202ENST00000356660 APBA3O96018 575 aa13.57□□□□□ -0.24
BDNF-202ENST00000356660 PLA2G4BP0C869 781 aa13.57□□□□□ -0.24
BDNF-202ENST00000356660 PDE6CP51160 858 aa13.57□□□□□ -0.24
BDNF-202ENST00000356660 TBC1D10BQ4KMP7 808 aaPredicted RBP13.57□□□□□ -0.24
BDNF-202ENST00000356660 TRPM8Q7Z2W7 1104 aa13.57□□□□□ -0.24
BDNF-202ENST00000356660 DGKHQ86XP1 1220 aa13.57□□□□□ -0.24
BDNF-202ENST00000356660 MYCT1Q8N699 235 aa13.57□□□□□ -0.24
BDNF-202ENST00000356660 CELF1Q92879 486 aaKnown RBP13.57□□□□□ -0.24
BDNF-202ENST00000356660 LZTS2Q9BRK4 669 aa13.57□□□□□ -0.24
BDNF-202ENST00000356660 NT5C3AQ9H0P0 336 aa13.57□□□□□ -0.24
BDNF-202ENST00000356660 TCP11X1B4DZS4 312 aa13.57□□□□□ -0.24
BDNF-202ENST00000356660 DNM1LO00429 736 aa13.57□□□□□ -0.24
BDNF-202ENST00000356660 ALDH3A1P30838 453 aa13.57□□□□□ -0.24
BDNF-202ENST00000356660 SLC29A2Q14542 456 aa13.57□□□□□ -0.24
BDNF-202ENST00000356660 CENPPQ6IPU0 288 aa13.57□□□□□ -0.24
BDNF-202ENST00000356660 RAD54LQ92698 747 aa13.57□□□□□ -0.24
BDNF-202ENST00000356660 SH3GL3Q99963 347 aa13.57□□□□□ -0.24
BDNF-202ENST00000356660 PSTPIP2Q9H939 334 aa13.57□□□□□ -0.24
BDNF-202ENST00000356660 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.57□□□□□ -0.24
BDNF-202ENST00000356660 TRAPPC3O43617 180 aa13.57□□□□□ -0.24
BDNF-202ENST00000356660 KRT15P19012 456 aa13.57□□□□□ -0.24
BDNF-202ENST00000356660 HSPA9P38646 679 aaKnown RBP13.57□□□□□ -0.24
BDNF-202ENST00000356660 MUM1Q2TAK8 710 aa13.57□□□□□ -0.24
BDNF-202ENST00000356660 OSBPL7Q9BZF2 842 aa13.57□□□□□ -0.24
BDNF-202ENST00000356660 FGFR1OP2Q9NVK5 253 aa13.57□□□□□ -0.24
BDNF-202ENST00000356660 POTEB3A0JP26 581 aa13.56□□□□□ -0.24
BDNF-202ENST00000356660 TTC36A6NLP5 189 aa13.56□□□□□ -0.24
BDNF-202ENST00000356660 DCDC2CA8MYV0 355 aa13.56□□□□□ -0.24
BDNF-202ENST00000356660 POTECB2RU33 542 aa13.56□□□□□ -0.24
BDNF-202ENST00000356660 THAP12O43422 761 aa13.56□□□□□ -0.24
BDNF-202ENST00000356660 GSCP56915 257 aaPredicted RBP13.56□□□□□ -0.24
BDNF-202ENST00000356660 PLCB4Q15147 1175 aa13.56□□□□□ -0.24
BDNF-202ENST00000356660 MEI1Q5TIA1 1274 aa13.56□□□□□ -0.24
BDNF-202ENST00000356660 POTEBQ6S5H4 581 aa13.56□□□□□ -0.24
BDNF-202ENST00000356660 SHISA4Q96DD7 197 aa13.56□□□□□ -0.24
BDNF-202ENST00000356660 PLVAPQ9BX97 442 aa13.56□□□□□ -0.24
BDNF-202ENST00000356660 ETNK1Q9HBU6 452 aa13.56□□□□□ -0.24
BDNF-202ENST00000356660 SH3GLB2Q9NR46 395 aa13.56□□□□□ -0.24
BDNF-202ENST00000356660 CHORDC1Q9UHD1 332 aaPredicted RBP13.56□□□□□ -0.24
BDNF-202ENST00000356660 FRMD4BQ9Y2L6 1034 aa13.56□□□□□ -0.24
BDNF-202ENST00000356660 SORBS3O60504 671 aa13.56□□□□□ -0.24
BDNF-202ENST00000356660 USP11P51784 963 aa13.56□□□□□ -0.24
BDNF-202ENST00000356660 UBXN2AP68543 259 aa13.56□□□□□ -0.24
BDNF-202ENST00000356660 C6orf118Q5T5N4 469 aa13.56□□□□□ -0.24
BDNF-202ENST00000356660 KIF9Q9HAQ2 790 aa13.56□□□□□ -0.24
BDNF-202ENST00000356660 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.56□□□□□ -0.24
BDNF-202ENST00000356660 SIK3Q9Y2K2 1263 aa13.56□□□□□ -0.24
BDNF-202ENST00000356660 EXOC3O60645 756 aa13.56□□□□□ -0.24
BDNF-202ENST00000356660 ATP5DP30049 168 aa13.56□□□□□ -0.24
BDNF-202ENST00000356660 FLT3P36888 993 aa13.56□□□□□ -0.24
BDNF-202ENST00000356660 CRYMQ14894 314 aa13.56□□□□□ -0.24
BDNF-202ENST00000356660 CYP4F22Q6NT55 531 aa13.56□□□□□ -0.24
BDNF-202ENST00000356660 GJB7Q6PEY0 223 aa13.56□□□□□ -0.24
BDNF-202ENST00000356660 TEKT1Q969V4 418 aa13.56□□□□□ -0.24
BDNF-202ENST00000356660 DDX23Q9BUQ8 820 aaKnown RBP13.56□□□□□ -0.24
BDNF-202ENST00000356660 SYNCQ9H7C4 482 aa13.56□□□□□ -0.24
BDNF-202ENST00000356660 IGF2BP3O00425 579 aaKnown RBP eCLIP13.55□□□□□ -0.24
BDNF-202ENST00000356660 ATP6V1G2O95670 118 aa13.55□□□□□ -0.24
BDNF-202ENST00000356660 BYSLQ13895 437 aaKnown RBP13.55□□□□□ -0.24
BDNF-202ENST00000356660 TSNAXIP1Q2TAA8 658 aa13.55□□□□□ -0.24
BDNF-202ENST00000356660 KCTD1Q719H9 257 aa13.55□□□□□ -0.24
BDNF-202ENST00000356660 GINS2Q9Y248 185 aa13.55□□□□□ -0.24
BDNF-202ENST00000356660 LRRD1A4D1F6 860 aa13.55□□□□□ -0.24
BDNF-202ENST00000356660 FUT2Q10981 343 aa13.55□□□□□ -0.24
BDNF-202ENST00000356660 ACCSLQ4AC99 568 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms