RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 DDX25Q9UHL0 483 aaKnown RBP4.49□□□□□ -1.69
CNOT4-202ENST00000356162 ZNF215Q9UL58 517 aaPredicted RBP4.49□□□□□ -1.69
CNOT4-202ENST00000356162 NOL7Q9UMY1 257 aaKnown RBP4.49□□□□□ -1.69
CNOT4-202ENST00000356162 ARID2Q68CP9 1835 aa4.49□□□□□ -1.69
CNOT4-202ENST00000356162 BTBD18B2RXH4 712 aa4.49□□□□□ -1.69
CNOT4-202ENST00000356162 IPO5O00410 1097 aaKnown RBP4.49□□□□□ -1.69
CNOT4-202ENST00000356162 MSH4O15457 936 aa4.49□□□□□ -1.69
CNOT4-202ENST00000356162 DTNBO60941 627 aa4.49□□□□□ -1.69
CNOT4-202ENST00000356162 ATP9AO75110 1047 aa4.49□□□□□ -1.69
CNOT4-202ENST00000356162 PPFIA4O75335 1185 aa4.49□□□□□ -1.69
CNOT4-202ENST00000356162 SUPT20HL2P0C7V6 817 aa4.49□□□□□ -1.69
CNOT4-202ENST00000356162 ZNF286BP0CG31 522 aa4.49□□□□□ -1.69
CNOT4-202ENST00000356162 PDCP20941 246 aa4.49□□□□□ -1.69
CNOT4-202ENST00000356162 CDK7P50613 346 aa4.49□□□□□ -1.69
CNOT4-202ENST00000356162 GUCY1B3Q02153 619 aa4.49□□□□□ -1.69
CNOT4-202ENST00000356162 ITGA7Q13683 1181 aa4.49□□□□□ -1.69
CNOT4-202ENST00000356162 GNL2Q13823 731 aaKnown RBP4.49□□□□□ -1.69
CNOT4-202ENST00000356162 LETM2Q2VYF4 491 aa4.49□□□□□ -1.69
CNOT4-202ENST00000356162 HSDL1Q3SXM5 330 aa4.49□□□□□ -1.69
CNOT4-202ENST00000356162 NOSTRINQ8IVI9 506 aa4.49□□□□□ -1.69
CNOT4-202ENST00000356162 FAM126BQ8IXS8 530 aa4.49□□□□□ -1.69
CNOT4-202ENST00000356162 SMAP1Q8IYB5 467 aaPredicted RBP4.49□□□□□ -1.69
CNOT4-202ENST00000356162 CYP2W1Q8TAV3 490 aa4.49□□□□□ -1.69
CNOT4-202ENST00000356162 ETNPPLQ8TBG4 499 aa4.49□□□□□ -1.69
CNOT4-202ENST00000356162 SEPT1Q8WYJ6 367 aa4.49□□□□□ -1.69
CNOT4-202ENST00000356162 KAT2BQ92831 832 aa4.49□□□□□ -1.69
CNOT4-202ENST00000356162 KCNMB3Q9NPA1 279 aa4.49□□□□□ -1.69
CNOT4-202ENST00000356162 PDLIM7Q9NR12 457 aa4.49□□□□□ -1.69
CNOT4-202ENST00000356162 ATP11BQ9Y2G3 1177 aa4.49□□□□□ -1.69
CNOT4-202ENST00000356162 IGSF9BQ9UPX0 1349 aa4.48□□□□□ -1.69
CNOT4-202ENST00000356162 MYH9P35579 1960 aaKnown RBP4.48□□□□□ -1.69
CNOT4-202ENST00000356162 GSTTP1A0A1W2PQM5 241 aa4.48□□□□□ -1.69
CNOT4-202ENST00000356162 DCDC2CA8MYV0 355 aa4.48□□□□□ -1.69
CNOT4-202ENST00000356162 WDR64B1ANS9 1081 aa4.48□□□□□ -1.69
CNOT4-202ENST00000356162 KIF28PB7ZC32 967 aa4.48□□□□□ -1.69
CNOT4-202ENST00000356162 H3BQV1 296 aa4.48□□□□□ -1.69
CNOT4-202ENST00000356162 KIAA0355O15063 1070 aa4.48□□□□□ -1.69
CNOT4-202ENST00000356162 DHX15O43143 795 aaKnown RBP4.48□□□□□ -1.69
CNOT4-202ENST00000356162 SLC37A4O43826 429 aa4.48□□□□□ -1.69
CNOT4-202ENST00000356162 SORBS3O60504 671 aa4.48□□□□□ -1.69
CNOT4-202ENST00000356162 NEMFO60524 1076 aa4.48□□□□□ -1.69
CNOT4-202ENST00000356162 GAS7O60861 476 aa4.48□□□□□ -1.69
CNOT4-202ENST00000356162 ATG7O95352 703 aa4.48□□□□□ -1.69
CNOT4-202ENST00000356162 CD4P01730 458 aa4.48□□□□□ -1.69
CNOT4-202ENST00000356162 CLTBP09497 229 aa4.48□□□□□ -1.69
CNOT4-202ENST00000356162 U2AF2P26368 475 aaKnown RBP eCLIP4.48□□□□□ -1.695e-7■■■■■ 54.6
CNOT4-202ENST00000356162 HOXC8P31273 242 aa4.48□□□□□ -1.69
CNOT4-202ENST00000356162 SFNP31947 248 aa4.48□□□□□ -1.69
CNOT4-202ENST00000356162 TCF7P36402 384 aaPredicted RBP4.48□□□□□ -1.69
CNOT4-202ENST00000356162 JAK3P52333 1124 aa4.48□□□□□ -1.69
CNOT4-202ENST00000356162 ACTR2P61160 394 aa4.48□□□□□ -1.69
CNOT4-202ENST00000356162 PSMC6P62333 389 aa4.48□□□□□ -1.69
CNOT4-202ENST00000356162 SKIV2LQ15477 1246 aaKnown RBP4.48□□□□□ -1.69
CNOT4-202ENST00000356162 EARS2Q5JPH6 523 aaKnown RBP4.48□□□□□ -1.69
CNOT4-202ENST00000356162 LRCH2Q5VUJ6 765 aa4.48□□□□□ -1.69
CNOT4-202ENST00000356162 FAM160B1Q5W0V3 765 aa4.48□□□□□ -1.69
CNOT4-202ENST00000356162 MIS18BP1Q6P0N0 1132 aa4.48□□□□□ -1.69
CNOT4-202ENST00000356162 TSC1Q92574 1164 aa4.48□□□□□ -1.69
CNOT4-202ENST00000356162 DPF3Q92784 378 aa4.48□□□□□ -1.69
CNOT4-202ENST00000356162 VTI1AQ96AJ9 217 aa4.48□□□□□ -1.69
CNOT4-202ENST00000356162 FAM20AQ96MK3 541 aa4.48□□□□□ -1.69
CNOT4-202ENST00000356162 ARID3AQ99856 593 aa4.48□□□□□ -1.69
CNOT4-202ENST00000356162 C16orf70Q9BSU1 422 aa4.48□□□□□ -1.69
CNOT4-202ENST00000356162 SMARCAD1Q9H4L7 1026 aa4.48□□□□□ -1.69
CNOT4-202ENST00000356162 TBX21Q9UL17 535 aa4.48□□□□□ -1.69
CNOT4-202ENST00000356162 LOXHD1Q8IVV2 1947 aa4.48□□□□□ -1.69
CNOT4-202ENST00000356162 GRIN2DO15399 1336 aa4.48□□□□□ -1.69
CNOT4-202ENST00000356162 COL1A2P08123 1366 aa4.48□□□□□ -1.69
CNOT4-202ENST00000356162 IGKV6D-21A0A0A0MT36 114 aa4.48□□□□□ -1.69
CNOT4-202ENST00000356162 DDX39AO00148 427 aaKnown RBP4.48□□□□□ -1.69
CNOT4-202ENST00000356162 CCNT1O60563 726 aaKnown RBP4.48□□□□□ -1.69
CNOT4-202ENST00000356162 PQBP1O60828 265 aaKnown RBP4.48□□□□□ -1.69
CNOT4-202ENST00000356162 PSMD10O75832 226 aa4.48□□□□□ -1.69
CNOT4-202ENST00000356162 BAG4O95429 457 aaKnown RBP4.48□□□□□ -1.69
CNOT4-202ENST00000356162 CCNE2O96020 404 aa4.48□□□□□ -1.69
CNOT4-202ENST00000356162 PSAPP07602 524 aa4.48□□□□□ -1.69
CNOT4-202ENST00000356162 VARSP26640 1264 aaKnown RBP4.48□□□□□ -1.69
CNOT4-202ENST00000356162 SLC26A2P50443 739 aa4.48□□□□□ -1.69
CNOT4-202ENST00000356162 SP4Q02446 784 aa4.48□□□□□ -1.69
CNOT4-202ENST00000356162 TLE2Q04725 743 aa4.48□□□□□ -1.69
CNOT4-202ENST00000356162 PPP2R5CQ13362 524 aa4.48□□□□□ -1.69
CNOT4-202ENST00000356162 KIAA0753Q2KHM9 967 aa4.48□□□□□ -1.69
CNOT4-202ENST00000356162 NBPF20Q3BBV1 942 aa4.48□□□□□ -1.69
CNOT4-202ENST00000356162 TTC38Q5R3I4 469 aa4.48□□□□□ -1.69
CNOT4-202ENST00000356162 UTP14CQ5TAP6 766 aaKnown RBP4.48□□□□□ -1.69
CNOT4-202ENST00000356162 B3GNT9Q6UX72 402 aa4.48□□□□□ -1.69
CNOT4-202ENST00000356162 ABHD15Q6UXT9 468 aa4.48□□□□□ -1.69
CNOT4-202ENST00000356162 PLPPR4Q7Z2D5 763 aa4.48□□□□□ -1.69
CNOT4-202ENST00000356162 BRAPQ7Z569 592 aa4.48□□□□□ -1.69
CNOT4-202ENST00000356162 SLFN12Q8IYM2 578 aa4.48□□□□□ -1.69
CNOT4-202ENST00000356162 CCDC155Q8N6L0 562 aa4.48□□□□□ -1.69
CNOT4-202ENST00000356162 AFAP1L1Q8TED9 768 aa4.48□□□□□ -1.69
CNOT4-202ENST00000356162 FAM167AQ96KS9 214 aa4.48□□□□□ -1.69
CNOT4-202ENST00000356162 AZI2Q9H6S1 392 aa4.48□□□□□ -1.69
CNOT4-202ENST00000356162 GTF2IRD1Q9UHL9 959 aa4.48□□□□□ -1.69
CNOT4-202ENST00000356162 H3BRB1 525 aa4.47□□□□□ -1.69
CNOT4-202ENST00000356162 B4GALT4O60513 344 aa4.47□□□□□ -1.69
CNOT4-202ENST00000356162 SMIM10L2AP0DMW4 78 aa4.47□□□□□ -1.69
CNOT4-202ENST00000356162 SMIM10L2BP0DMW5 78 aa4.47□□□□□ -1.69
CNOT4-202ENST00000356162 PDIA4P13667 645 aaKnown RBP4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms