RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 CD2BP2O95400 341 aaKnown RBP19.37■□□□□ 0.69
COL18A1-202ENST00000355480 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.37■□□□□ 0.691e-6■□□□□ 11
COL18A1-202ENST00000355480 POTEMA6NI47 508 aa19.36■□□□□ 0.69
COL18A1-202ENST00000355480 PODNQ7Z5L7 613 aa19.36■□□□□ 0.69
COL18A1-202ENST00000355480 TRMT2AQ8IZ69 625 aaKnown RBP19.36■□□□□ 0.69
COL18A1-202ENST00000355480 MB21D1Q8N884 522 aa19.36■□□□□ 0.69
COL18A1-202ENST00000355480 RNF217Q8TC41 542 aa19.36■□□□□ 0.69
COL18A1-202ENST00000355480 GINM1Q9NU53 330 aa19.36■□□□□ 0.69
COL18A1-202ENST00000355480 MX2P20592 715 aa19.36■□□□□ 0.69
COL18A1-202ENST00000355480 NECTIN1Q15223 517 aa19.36■□□□□ 0.69
COL18A1-202ENST00000355480 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.36■□□□□ 0.69
COL18A1-202ENST00000355480 SCN4BQ8IWT1 228 aa19.36■□□□□ 0.69
COL18A1-202ENST00000355480 PDIK1LQ8N165 341 aa19.36■□□□□ 0.69
COL18A1-202ENST00000355480 NSUN6Q8TEA1 469 aaKnown RBP19.36■□□□□ 0.69
COL18A1-202ENST00000355480 PSPC1Q8WXF1 523 aaKnown RBP19.36■□□□□ 0.69
COL18A1-202ENST00000355480 ADAMTS1Q9UHI8 967 aa19.36■□□□□ 0.69
COL18A1-202ENST00000355480 ZNF568Q3ZCX4 644 aa19.36■□□□□ 0.69
COL18A1-202ENST00000355480 TRIM67Q6ZTA4 783 aa19.36■□□□□ 0.69
COL18A1-202ENST00000355480 CPVLQ9H3G5 476 aa19.36■□□□□ 0.69
COL18A1-202ENST00000355480 ORC6Q9Y5N6 252 aa19.36■□□□□ 0.69
COL18A1-202ENST00000355480 USP17L15C9J2P7 530 aa19.36■□□□□ 0.69
COL18A1-202ENST00000355480 USP17L13C9JLJ4 530 aa19.36■□□□□ 0.69
COL18A1-202ENST00000355480 USP17L11C9JVI0 530 aa19.36■□□□□ 0.69
COL18A1-202ENST00000355480 USP17L18D6R9N7 530 aa19.36■□□□□ 0.69
COL18A1-202ENST00000355480 USP17L22D6RA61 530 aa19.36■□□□□ 0.69
COL18A1-202ENST00000355480 USP17L17D6RBQ6 530 aa19.36■□□□□ 0.69
COL18A1-202ENST00000355480 USP17L19D6RCP7 530 aa19.36■□□□□ 0.69
COL18A1-202ENST00000355480 USP17L20D6RJB6 530 aa19.36■□□□□ 0.69
COL18A1-202ENST00000355480 STK25O00506 426 aa19.36■□□□□ 0.69
COL18A1-202ENST00000355480 INPP1P49441 399 aa19.36■□□□□ 0.69
COL18A1-202ENST00000355480 USP17L24Q0WX57 530 aa19.36■□□□□ 0.69
COL18A1-202ENST00000355480 KLC3Q6P597 504 aa19.36■□□□□ 0.69
COL18A1-202ENST00000355480 USP17L6PQ6QN14 398 aa19.36■□□□□ 0.69
COL18A1-202ENST00000355480 G3BP2Q9UN86 482 aaKnown RBP19.36■□□□□ 0.69
COL18A1-202ENST00000355480 ARHGEF5Q12774 1597 aa19.36■□□□□ 0.69
COL18A1-202ENST00000355480 PHEXP78562 749 aa19.36■□□□□ 0.69
COL18A1-202ENST00000355480 PADI6Q6TGC4 694 aa19.36■□□□□ 0.69
COL18A1-202ENST00000355480 PYROXD1Q8WU10 500 aa19.36■□□□□ 0.69
COL18A1-202ENST00000355480 DHX38Q92620 1227 aaKnown RBP19.36■□□□□ 0.69
COL18A1-202ENST00000355480 EXT2Q93063 718 aa19.36■□□□□ 0.69
COL18A1-202ENST00000355480 TBC1D22BQ9NU19 505 aa19.36■□□□□ 0.69
COL18A1-202ENST00000355480 NEDD4P46934 1319 aa19.35■□□□□ 0.69
COL18A1-202ENST00000355480 CYP27B1O15528 508 aa19.35■□□□□ 0.69
COL18A1-202ENST00000355480 RECQLP46063 649 aaPredicted RBP19.35■□□□□ 0.69
COL18A1-202ENST00000355480 KRT31Q15323 416 aa19.35■□□□□ 0.69
COL18A1-202ENST00000355480 UNC13DQ70J99 1090 aa19.35■□□□□ 0.69
COL18A1-202ENST00000355480 PHLPP2Q6ZVD8 1323 aa19.35■□□□□ 0.69
COL18A1-202ENST00000355480 USP17L10C9JJH3 530 aa19.35■□□□□ 0.69
COL18A1-202ENST00000355480 HUS1O60921 280 aa19.35■□□□□ 0.69
COL18A1-202ENST00000355480 ZBTB7AO95365 584 aa19.35■□□□□ 0.69
COL18A1-202ENST00000355480 CDR2Q01850 454 aa19.35■□□□□ 0.69
COL18A1-202ENST00000355480 TTC30AQ86WT1 665 aa19.35■□□□□ 0.69
COL18A1-202ENST00000355480 RHOT2Q8IXI1 618 aa19.35■□□□□ 0.69
COL18A1-202ENST00000355480 RNF146Q9NTX7 359 aa19.35■□□□□ 0.69
COL18A1-202ENST00000355480 DNAJC12Q9UKB3 198 aa19.35■□□□□ 0.69
COL18A1-202ENST00000355480 ZNF699Q32M78 642 aa19.35■□□□□ 0.69
COL18A1-202ENST00000355480 CENPUQ71F23 418 aa19.35■□□□□ 0.69
COL18A1-202ENST00000355480 SFR1Q86XK3 245 aa19.35■□□□□ 0.69
COL18A1-202ENST00000355480 ELMOD1Q8N336 334 aa19.35■□□□□ 0.69
COL18A1-202ENST00000355480 ADAM22Q9P0K1 906 aa19.35■□□□□ 0.69
COL18A1-202ENST00000355480 MOSPD1Q9UJG1 213 aa19.35■□□□□ 0.69
COL18A1-202ENST00000355480 MID2Q9UJV3 735 aa19.35■□□□□ 0.69
COL18A1-202ENST00000355480 COL15A1P39059 1388 aa19.35■□□□□ 0.69
COL18A1-202ENST00000355480 PLS3P13797 630 aa19.35■□□□□ 0.69
COL18A1-202ENST00000355480 IFT88Q13099 833 aa19.35■□□□□ 0.69
COL18A1-202ENST00000355480 ANKRD20A4Q4UJ75 823 aa19.35■□□□□ 0.69
COL18A1-202ENST00000355480 ANKRD20A8PQ5CZ79 823 aa19.35■□□□□ 0.69
COL18A1-202ENST00000355480 ANKRD20A2Q5SQ80 823 aa19.35■□□□□ 0.69
COL18A1-202ENST00000355480 ANKRD20A1Q5TYW2 823 aa19.35■□□□□ 0.69
COL18A1-202ENST00000355480 TBC1D10CQ8IV04 446 aa19.35■□□□□ 0.69
COL18A1-202ENST00000355480 FAF2Q96CS3 445 aa19.35■□□□□ 0.69
COL18A1-202ENST00000355480 SNAP23O00161 211 aa19.35■□□□□ 0.69
COL18A1-202ENST00000355480 TSPY1Q01534 308 aa19.35■□□□□ 0.69
COL18A1-202ENST00000355480 TBC1D9BQ66K14 1250 aa19.35■□□□□ 0.69
COL18A1-202ENST00000355480 RCSD1Q6JBY9 416 aa19.35■□□□□ 0.69
COL18A1-202ENST00000355480 GAS2L3Q86XJ1 694 aa19.35■□□□□ 0.69
COL18A1-202ENST00000355480 WDR91A4D1P6 747 aa19.34■□□□□ 0.69
COL18A1-202ENST00000355480 CHEK2O96017 543 aa19.34■□□□□ 0.69
COL18A1-202ENST00000355480 CYP2E1P05181 493 aaPredicted RBP19.34■□□□□ 0.69
COL18A1-202ENST00000355480 PFKFB3Q16875 520 aaPredicted RBP19.34■□□□□ 0.69
COL18A1-202ENST00000355480 RSBN1LQ6PCB5 846 aaPredicted RBP19.34■□□□□ 0.69
COL18A1-202ENST00000355480 SYNE4Q8N205 404 aa19.34■□□□□ 0.69
COL18A1-202ENST00000355480 GDAQ9Y2T3 454 aa19.34■□□□□ 0.69
COL18A1-202ENST00000355480 MYO5CQ9NQX4 1742 aa19.34■□□□□ 0.69
COL18A1-202ENST00000355480 RASGRF2O14827 1237 aa19.34■□□□□ 0.69
COL18A1-202ENST00000355480 SLC8A1P32418 973 aa19.34■□□□□ 0.69
COL18A1-202ENST00000355480 NEK9Q8TD19 979 aa19.34■□□□□ 0.69
COL18A1-202ENST00000355480 MTRQ99707 1265 aa19.34■□□□□ 0.69
COL18A1-202ENST00000355480 KIAA1586Q9HCI6 787 aa19.34■□□□□ 0.69
COL18A1-202ENST00000355480 ZNF302Q9NR11 478 aa19.34■□□□□ 0.69
COL18A1-202ENST00000355480 AFF2P51816 1311 aa19.34■□□□□ 0.69
COL18A1-202ENST00000355480 CTNND1O60716 968 aaKnown RBP19.34■□□□□ 0.69
COL18A1-202ENST00000355480 KRT76Q01546 638 aa19.34■□□□□ 0.69
COL18A1-202ENST00000355480 VPS39Q96JC1 886 aa19.34■□□□□ 0.69
COL18A1-202ENST00000355480 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.34■□□□□ 0.69
COL18A1-202ENST00000355480 UTYO14607 1347 aa19.34■□□□□ 0.69
COL18A1-202ENST00000355480 GPSM2P81274 684 aa19.34■□□□□ 0.69
COL18A1-202ENST00000355480 YWHAHQ04917 246 aaPredicted RBP19.34■□□□□ 0.69
COL18A1-202ENST00000355480 DNAJC17Q9NVM6 304 aaKnown RBP19.34■□□□□ 0.69
COL18A1-202ENST00000355480 DONSONQ9NYP3 566 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms