RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 CDY1Q9Y6F8 540 aa8.57□□□□□ -1.04
HTT-201ENST00000355072 MYH7BA7E2Y1 1941 aa8.57□□□□□ -1.04
HTT-201ENST00000355072 AATKQ6ZMQ8 1374 aa8.57□□□□□ -1.04
HTT-201ENST00000355072 CTIFO43310 598 aaKnown RBP8.57□□□□□ -1.04
HTT-201ENST00000355072 KHDRBS2Q5VWX1 349 aaKnown RBP8.57□□□□□ -1.04
HTT-201ENST00000355072 VGLL3A8MV65 326 aa8.57□□□□□ -1.04
HTT-201ENST00000355072 UGP2Q16851 508 aa8.57□□□□□ -1.04
HTT-201ENST00000355072 SORCS3Q9UPU3 1222 aa8.57□□□□□ -1.04
HTT-201ENST00000355072 AFDNP55196 1824 aaKnown RBP8.57□□□□□ -1.04
HTT-201ENST00000355072 CROCCQ5TZA2 2017 aa8.57□□□□□ -1.04
HTT-201ENST00000355072 TKTP29401 623 aaKnown RBP8.57□□□□□ -1.04
HTT-201ENST00000355072 TRMT44Q8IYL2 757 aaKnown RBP8.57□□□□□ -1.04
HTT-201ENST00000355072 EIF1ADQ8N9N8 165 aaKnown RBP8.57□□□□□ -1.04
HTT-201ENST00000355072 EPB41L5Q9HCM4 733 aa8.57□□□□□ -1.04
HTT-201ENST00000355072 HESX1Q9UBX0 185 aa8.57□□□□□ -1.04
HTT-201ENST00000355072 PAPOLAP51003 745 aaKnown RBP8.57□□□□□ -1.04
HTT-201ENST00000355072 PLCH2O75038 1416 aa8.57□□□□□ -1.04
HTT-201ENST00000355072 SMCO2A6NFE2 343 aa8.57□□□□□ -1.04
HTT-201ENST00000355072 GSTA4O15217 222 aa8.57□□□□□ -1.04
HTT-201ENST00000355072 TRIM71Q2Q1W2 868 aaKnown RBP8.57□□□□□ -1.04
HTT-201ENST00000355072 HERC4Q5GLZ8 1057 aaPredicted RBP8.57□□□□□ -1.04
HTT-201ENST00000355072 MAML1Q92585 1016 aa8.57□□□□□ -1.04
HTT-201ENST00000355072 ANKARQ7Z5J8 1434 aa8.57□□□□□ -1.04
HTT-201ENST00000355072 E2F6O75461 281 aa8.57□□□□□ -1.04
HTT-201ENST00000355072 PPP1R18Q6NYC8 613 aa8.57□□□□□ -1.04
HTT-201ENST00000355072 CDR2LQ86X02 465 aaPredicted RBP8.57□□□□□ -1.04
HTT-201ENST00000355072 KCNK16Q96T55 309 aa8.57□□□□□ -1.04
HTT-201ENST00000355072 RBM42Q9BTD8 480 aaKnown RBP8.57□□□□□ -1.04
HTT-201ENST00000355072 TMEM245Q9H330 911 aa8.57□□□□□ -1.04
HTT-201ENST00000355072 HADHAP40939 763 aa8.57□□□□□ -1.04
HTT-201ENST00000355072 DKK3Q9UBP4 350 aa8.57□□□□□ -1.04
HTT-201ENST00000355072 H0Y3Z8 333 aa8.57□□□□□ -1.04
HTT-201ENST00000355072 WDR47O94967 919 aa8.57□□□□□ -1.04
HTT-201ENST00000355072 SLFN12LQ6IEE8 588 aa8.57□□□□□ -1.04
HTT-201ENST00000355072 PHF21AQ96BD5 680 aa8.57□□□□□ -1.04
HTT-201ENST00000355072 CDHR1Q96JP9 859 aa8.57□□□□□ -1.04
HTT-201ENST00000355072 LARP6Q9BRS8 491 aaKnown RBP8.57□□□□□ -1.04
HTT-201ENST00000355072 FAM187AA6NFU0 413 aa8.57□□□□□ -1.04
HTT-201ENST00000355072 RGS2P41220 211 aa8.57□□□□□ -1.04
HTT-201ENST00000355072 GCNT4Q9P109 453 aa8.57□□□□□ -1.04
HTT-201ENST00000355072 IRX5P78411 483 aaPredicted RBP8.56□□□□□ -1.04
HTT-201ENST00000355072 TXNDC2Q86VQ3 553 aa8.56□□□□□ -1.04
HTT-201ENST00000355072 C1orf50Q9BV19 199 aa8.56□□□□□ -1.04
HTT-201ENST00000355072 SEL1LQ9UBV2 794 aa8.56□□□□□ -1.04
HTT-201ENST00000355072 STAP2Q9UGK3 403 aa8.56□□□□□ -1.04
HTT-201ENST00000355072 TRIM16LQ309B1 348 aa8.56□□□□□ -1.04
HTT-201ENST00000355072 TRMT5Q32P41 509 aaKnown RBP8.56□□□□□ -1.04
HTT-201ENST00000355072 THOC7Q6I9Y2 204 aaKnown RBP8.56□□□□□ -1.04
HTT-201ENST00000355072 MIGA1Q8NAN2 632 aa8.56□□□□□ -1.04
HTT-201ENST00000355072 ANKRD7Q92527 254 aa8.56□□□□□ -1.04
HTT-201ENST00000355072 ZNF229Q9UJW7 825 aa8.56□□□□□ -1.04
HTT-201ENST00000355072 CCDC88AQ3V6T2 1871 aa8.56□□□□□ -1.04
HTT-201ENST00000355072 M0QZ92 97 aa8.56□□□□□ -1.04
HTT-201ENST00000355072 TNFAIP8O95379 198 aa8.56□□□□□ -1.04
HTT-201ENST00000355072 CENPPQ6IPU0 288 aa8.56□□□□□ -1.04
HTT-201ENST00000355072 TMC4Q7Z404 712 aa8.56□□□□□ -1.04
HTT-201ENST00000355072 KRT73Q86Y46 540 aa8.56□□□□□ -1.04
HTT-201ENST00000355072 PYROXD1Q8WU10 500 aa8.56□□□□□ -1.04
HTT-201ENST00000355072 EYA3Q99504 573 aa8.56□□□□□ -1.04
HTT-201ENST00000355072 RABGEF1Q9UJ41 708 aa8.56□□□□□ -1.04
HTT-201ENST00000355072 ANGPT2O15123 496 aa8.56□□□□□ -1.04
HTT-201ENST00000355072 SLC9A1P19634 815 aa8.56□□□□□ -1.04
HTT-201ENST00000355072 SNRPFP62306 86 aaKnown RBP8.56□□□□□ -1.04
HTT-201ENST00000355072 SKOR1P84550 965 aa8.56□□□□□ -1.04
HTT-201ENST00000355072 GABPAQ06546 454 aa8.56□□□□□ -1.04
HTT-201ENST00000355072 ENOSF1Q7L5Y1 443 aa8.56□□□□□ -1.04
HTT-201ENST00000355072 ATP8A1Q9Y2Q0 1164 aa8.56□□□□□ -1.04
HTT-201ENST00000355072 CYP7A1P22680 504 aa8.56□□□□□ -1.04
HTT-201ENST00000355072 CUL4AQ13619 759 aa8.56□□□□□ -1.04
HTT-201ENST00000355072 IQCB1Q15051 598 aa8.56□□□□□ -1.04
HTT-201ENST00000355072 CASZ1Q86V15 1759 aa8.56□□□□□ -1.04
HTT-201ENST00000355072 PPP1R37O75864 691 aa8.56□□□□□ -1.04
HTT-201ENST00000355072 AFPP02771 609 aaKnown RBP8.56□□□□□ -1.04
HTT-201ENST00000355072 MT-ND3P03897 115 aa8.56□□□□□ -1.04
HTT-201ENST00000355072 RASSF3Q86WH2 238 aa8.56□□□□□ -1.04
HTT-201ENST00000355072 ZBTB18Q99592 522 aa8.56□□□□□ -1.04
HTT-201ENST00000355072 STX7O15400 261 aaKnown RBP8.56□□□□□ -1.04
HTT-201ENST00000355072 S100A1P23297 94 aa8.56□□□□□ -1.04
HTT-201ENST00000355072 TGFBR2P37173 567 aa8.56□□□□□ -1.04
HTT-201ENST00000355072 DIXDC1Q155Q3 683 aa8.56□□□□□ -1.04
HTT-201ENST00000355072 USP33Q8TEY7 942 aa8.56□□□□□ -1.04
HTT-201ENST00000355072 SEPT1Q8WYJ6 367 aa8.56□□□□□ -1.04
HTT-201ENST00000355072 ZNF556Q9HAH1 456 aa8.56□□□□□ -1.04
HTT-201ENST00000355072 HMG20AQ9NP66 347 aa8.56□□□□□ -1.04
HTT-201ENST00000355072 IRAK4Q9NWZ3 460 aa8.56□□□□□ -1.04
HTT-201ENST00000355072 PLAAQ9Y263 795 aa8.56□□□□□ -1.04
HTT-201ENST00000355072 H3BNX3 289 aa8.56□□□□□ -1.04
HTT-201ENST00000355072 TMOD1P28289 359 aa8.56□□□□□ -1.04
HTT-201ENST00000355072 PMS2P54278 862 aa8.56□□□□□ -1.04
HTT-201ENST00000355072 RCN2Q14257 317 aa8.56□□□□□ -1.04
HTT-201ENST00000355072 LRRC49Q8IUZ0 686 aa8.56□□□□□ -1.04
HTT-201ENST00000355072 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.56□□□□□ -1.048e-7■■■□□ 16.5
HTT-201ENST00000355072 MRPL1Q9BYD6 325 aaKnown RBP8.56□□□□□ -1.04
HTT-201ENST00000355072 BTBD7Q9P203 1132 aa8.56□□□□□ -1.04
HTT-201ENST00000355072 STARD13Q9Y3M8 1113 aa8.56□□□□□ -1.04
HTT-201ENST00000355072 SQORQ9Y6N5 450 aa8.56□□□□□ -1.04
HTT-201ENST00000355072 LDHAP00338 332 aaKnown RBP8.56□□□□□ -1.04
HTT-201ENST00000355072 PNOCQ13519 176 aa8.56□□□□□ -1.04
HTT-201ENST00000355072 PLBD2Q8NHP8 589 aa8.56□□□□□ -1.04
HTT-201ENST00000355072 DDX56Q9NY93 547 aaKnown RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms