RNA–Protein interactions for RNA: ENST00000354433.7

CDRT1-202, CMT1A duplicated region transcript 1, humanhuman

TSL 2 BASIC

Gene CDRT1, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-202ENST00000354433 RESTQ13127 1097 aa13□□□□□ -0.33
CDRT1-202ENST00000354433 GRB10Q13322 594 aa13□□□□□ -0.33
CDRT1-202ENST00000354433 MAPK8IP2Q13387 824 aaPredicted RBP13□□□□□ -0.33
CDRT1-202ENST00000354433 IER5Q5VY09 327 aa13□□□□□ -0.33
CDRT1-202ENST00000354433 KRT40Q6A162 431 aa13□□□□□ -0.33
CDRT1-202ENST00000354433 RPAINQ86UA6 219 aa13□□□□□ -0.33
CDRT1-202ENST00000354433 CRYGNQ8WXF5 182 aa13□□□□□ -0.33
CDRT1-202ENST00000354433 SYMPKQ92797 1274 aaKnown RBP13□□□□□ -0.33
CDRT1-202ENST00000354433 SH3GLB2Q9NR46 395 aa13□□□□□ -0.33
CDRT1-202ENST00000354433 ORC3Q9UBD5 711 aaPredicted RBP13□□□□□ -0.33
CDRT1-202ENST00000354433 MTCH2Q9Y6C9 303 aa13□□□□□ -0.33
CDRT1-202ENST00000354433 PTPRSQ13332 1948 aa13□□□□□ -0.33
CDRT1-202ENST00000354433 MYO9BQ13459 2157 aa12.99□□□□□ -0.33
CDRT1-202ENST00000354433 CHMP2AO43633 222 aa12.99□□□□□ -0.33
CDRT1-202ENST00000354433 HBP1O60381 514 aa12.99□□□□□ -0.33
CDRT1-202ENST00000354433 KRT76Q01546 638 aa12.99□□□□□ -0.33
CDRT1-202ENST00000354433 LPIN1Q14693 890 aa12.99□□□□□ -0.33
CDRT1-202ENST00000354433 SWSAP1Q6NVH7 229 aa12.99□□□□□ -0.33
CDRT1-202ENST00000354433 ABHD15Q6UXT9 468 aa12.99□□□□□ -0.33
CDRT1-202ENST00000354433 TSHZ1Q6ZSZ6 1077 aa12.99□□□□□ -0.33
CDRT1-202ENST00000354433 SMAP1Q8IYB5 467 aaPredicted RBP12.99□□□□□ -0.33
CDRT1-202ENST00000354433 ATP8B4Q8TF62 1192 aa12.99□□□□□ -0.33
CDRT1-202ENST00000354433 SCAND2PQ9GZW5 306 aaPredicted RBP12.99□□□□□ -0.33
CDRT1-202ENST00000354433 PCDHA4Q9UN74 947 aa12.99□□□□□ -0.33
CDRT1-202ENST00000354433 TRPV2Q9Y5S1 764 aa12.99□□□□□ -0.33
CDRT1-202ENST00000354433 CHD7Q9P2D1 2997 aa12.99□□□□□ -0.33
CDRT1-202ENST00000354433 CUL9Q8IWT3 2517 aa12.99□□□□□ -0.33
CDRT1-202ENST00000354433 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.98□□□□□ -0.33
CDRT1-202ENST00000354433 DHX15O43143 795 aaKnown RBP12.98□□□□□ -0.33
CDRT1-202ENST00000354433 ATG7O95352 703 aa12.98□□□□□ -0.33
CDRT1-202ENST00000354433 PSAPP07602 524 aa12.98□□□□□ -0.33
CDRT1-202ENST00000354433 IBSPP21815 317 aaPredicted RBP12.98□□□□□ -0.33
CDRT1-202ENST00000354433 DNM1Q05193 864 aaKnown RBP12.98□□□□□ -0.33
CDRT1-202ENST00000354433 MKRN4PQ13434 485 aaPredicted RBP12.98□□□□□ -0.33
CDRT1-202ENST00000354433 FBXO47Q5MNV8 452 aa12.98□□□□□ -0.33
CDRT1-202ENST00000354433 ZNF746Q6NUN9 644 aaPredicted RBP12.98□□□□□ -0.33
CDRT1-202ENST00000354433 FBXO18Q8NFZ0 1043 aa12.98□□□□□ -0.33
CDRT1-202ENST00000354433 TBCKQ8TEA7 893 aa12.98□□□□□ -0.33
CDRT1-202ENST00000354433 ATXN2LQ8WWM7 1075 aaKnown RBP12.98□□□□□ -0.33
CDRT1-202ENST00000354433 WASF1Q92558 559 aa12.98□□□□□ -0.33
CDRT1-202ENST00000354433 TOP1MTQ969P6 601 aa12.98□□□□□ -0.33
CDRT1-202ENST00000354433 C8orf76Q96K31 380 aa12.98□□□□□ -0.33
CDRT1-202ENST00000354433 C17orf80Q9BSJ5 609 aa12.98□□□□□ -0.33
CDRT1-202ENST00000354433 GABBR1Q9UBS5 961 aa12.98□□□□□ -0.33
CDRT1-202ENST00000354433 PCDHA2Q9Y5H9 948 aa12.98□□□□□ -0.33
CDRT1-202ENST00000354433 IGKV6D-21A0A0A0MT36 114 aa12.98□□□□□ -0.33
CDRT1-202ENST00000354433 SMIM35A0A1B0GVV1 85 aa12.98□□□□□ -0.33
CDRT1-202ENST00000354433 WDR64B1ANS9 1081 aa12.98□□□□□ -0.33
CDRT1-202ENST00000354433 GAS7O60861 476 aa12.98□□□□□ -0.33
CDRT1-202ENST00000354433 XBP1P17861 261 aa12.98□□□□□ -0.33
CDRT1-202ENST00000354433 CD52P31358 61 aa12.98□□□□□ -0.33
CDRT1-202ENST00000354433 CIITAP33076 1130 aa12.98□□□□□ -0.33
CDRT1-202ENST00000354433 DEKP35659 375 aaKnown RBP12.98□□□□□ -0.33
CDRT1-202ENST00000354433 ERVK-21P61565 698 aa12.98□□□□□ -0.33
CDRT1-202ENST00000354433 UBE2HP62256 183 aa12.98□□□□□ -0.33
CDRT1-202ENST00000354433 MRPS5P82675 430 aaKnown RBP12.98□□□□□ -0.33
CDRT1-202ENST00000354433 PAK2Q13177 524 aa12.98□□□□□ -0.33
CDRT1-202ENST00000354433 MTHFD1LQ6UB35 978 aa12.98□□□□□ -0.33
CDRT1-202ENST00000354433 BLIDQ8IZY5 108 aa12.98□□□□□ -0.33
CDRT1-202ENST00000354433 FBXO22Q8NEZ5 403 aa12.98□□□□□ -0.33
CDRT1-202ENST00000354433 GPT2Q8TD30 523 aa12.98□□□□□ -0.33
CDRT1-202ENST00000354433 CHAMP1Q96JM3 812 aa12.98□□□□□ -0.33
CDRT1-202ENST00000354433 AIFM3Q96NN9 605 aa12.98□□□□□ -0.33
CDRT1-202ENST00000354433 SUGCTQ9HAC7 445 aa12.98□□□□□ -0.33
CDRT1-202ENST00000354433 CFAP45Q9UL16 551 aa12.98□□□□□ -0.33
CDRT1-202ENST00000354433 PCDHA10Q9Y5I2 948 aa12.98□□□□□ -0.33
CDRT1-202ENST00000354433 MICAL3Q7RTP6 2002 aa12.97□□□□□ -0.33
CDRT1-202ENST00000354433 COL1A2P08123 1366 aa12.97□□□□□ -0.33
CDRT1-202ENST00000354433 COL4A4P53420 1690 aaPredicted RBP12.97□□□□□ -0.33
CDRT1-202ENST00000354433 DTNBO60941 627 aa12.97□□□□□ -0.33
CDRT1-202ENST00000354433 KLRC1P26715 233 aa12.97□□□□□ -0.33
CDRT1-202ENST00000354433 HTRA4P83105 476 aaPredicted RBP12.97□□□□□ -0.33
CDRT1-202ENST00000354433 LRCH2Q5VUJ6 765 aa12.97□□□□□ -0.33
CDRT1-202ENST00000354433 FERMT3Q86UX7 667 aa12.97□□□□□ -0.33
CDRT1-202ENST00000354433 METTL13Q8N6R0 699 aa12.97□□□□□ -0.33
CDRT1-202ENST00000354433 BBXQ8WY36 941 aaPredicted RBP12.97□□□□□ -0.33
CDRT1-202ENST00000354433 SYAP1Q96A49 352 aaPredicted RBP12.97□□□□□ -0.33
CDRT1-202ENST00000354433 PPP1R16BQ96T49 567 aa12.97□□□□□ -0.33
CDRT1-202ENST00000354433 TEKT3Q9BXF9 490 aa12.97□□□□□ -0.33
CDRT1-202ENST00000354433 AGO3Q9H9G7 860 aaKnown RBP12.97□□□□□ -0.33
CDRT1-202ENST00000354433 CEP131Q9UPN4 1083 aa12.97□□□□□ -0.33
CDRT1-202ENST00000354433 KAT6AQ92794 2004 aa12.96□□□□□ -0.33
CDRT1-202ENST00000354433 MSH4O15457 936 aa12.96□□□□□ -0.33
CDRT1-202ENST00000354433 LPXNO60711 386 aa12.96□□□□□ -0.33
CDRT1-202ENST00000354433 TDP2O95551 362 aa12.96□□□□□ -0.33
CDRT1-202ENST00000354433 POU3F3P20264 500 aaPredicted RBP12.96□□□□□ -0.33
CDRT1-202ENST00000354433 USP11P51784 963 aa12.96□□□□□ -0.33
CDRT1-202ENST00000354433 NFX1Q12986 1120 aaKnown RBP12.96□□□□□ -0.33
CDRT1-202ENST00000354433 NONOQ15233 471 aaKnown RBP eCLIP12.96□□□□□ -0.33
CDRT1-202ENST00000354433 ZNF484Q5JVG2 852 aa12.96□□□□□ -0.33
CDRT1-202ENST00000354433 BRAPQ7Z569 592 aa12.96□□□□□ -0.33
CDRT1-202ENST00000354433 SP7Q8TDD2 431 aaPredicted RBP12.96□□□□□ -0.33
CDRT1-202ENST00000354433 LENG9Q96B70 501 aa12.96□□□□□ -0.33
CDRT1-202ENST00000354433 ZNF396Q96N95 335 aaPredicted RBP12.96□□□□□ -0.33
CDRT1-202ENST00000354433 SAMD11Q96NU1 681 aa12.96□□□□□ -0.33
CDRT1-202ENST00000354433 ASB2Q96Q27 587 aa12.96□□□□□ -0.33
CDRT1-202ENST00000354433 FTHL17Q9BXU8 183 aa12.96□□□□□ -0.33
CDRT1-202ENST00000354433 CELF4Q9BZC1 486 aaKnown RBP12.96□□□□□ -0.33
CDRT1-202ENST00000354433 DISC1Q9NRI5 854 aa12.96□□□□□ -0.33
CDRT1-202ENST00000354433 KCNJ14Q9UNX9 436 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms