RNA–Protein interactions for RNA: ENST00000353909.7

MBD1-205, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-205ENST00000353909 SLC35C1Q96A29 364 aa17.09■□□□□ 0.33
MBD1-205ENST00000353909 RHOXF2Q9BQY4 288 aa17.09■□□□□ 0.33
MBD1-205ENST00000353909 AGO4Q9HCK5 861 aaKnown RBP17.09■□□□□ 0.33
MBD1-205ENST00000353909 UBIAD1Q9Y5Z9 338 aa17.09■□□□□ 0.33
MBD1-205ENST00000353909 ZHX2Q9Y6X8 837 aa17.09■□□□□ 0.33
MBD1-205ENST00000353909 VWA5AO00534 786 aa17.09■□□□□ 0.33
MBD1-205ENST00000353909 XRCC5P13010 732 aaKnown RBP17.09■□□□□ 0.33
MBD1-205ENST00000353909 GAP43P17677 238 aa17.09■□□□□ 0.33
MBD1-205ENST00000353909 MTMR1Q13613 665 aa17.09■□□□□ 0.33
MBD1-205ENST00000353909 SFMBT2Q5VUG0 894 aa17.09■□□□□ 0.33
MBD1-205ENST00000353909 FAM178BQ8IXR5 827 aa17.09■□□□□ 0.33
MBD1-205ENST00000353909 SECISBP2LQ93073 1101 aaKnown RBP17.09■□□□□ 0.33
MBD1-205ENST00000353909 TRERF1Q96PN7 1200 aa17.09■□□□□ 0.33
MBD1-205ENST00000353909 MMS19Q96T76 1030 aa17.09■□□□□ 0.33
MBD1-205ENST00000353909 SGIP1Q9BQI5 828 aa17.09■□□□□ 0.33
MBD1-205ENST00000353909 EDEM3Q9BZQ6 932 aa17.09■□□□□ 0.33
MBD1-205ENST00000353909 AJAP1Q9UKB5 411 aaPredicted RBP17.09■□□□□ 0.33
MBD1-205ENST00000353909 HIP1RO75146 1068 aa17.08■□□□□ 0.33
MBD1-205ENST00000353909 ZNF131P52739 623 aa17.08■□□□□ 0.33
MBD1-205ENST00000353909 HMGCS2P54868 508 aa17.08■□□□□ 0.33
MBD1-205ENST00000353909 PGM5Q15124 567 aa17.08■□□□□ 0.33
MBD1-205ENST00000353909 PCNX4Q63HM2 1172 aa17.08■□□□□ 0.33
MBD1-205ENST00000353909 TMCO3Q6UWJ1 677 aa17.08■□□□□ 0.33
MBD1-205ENST00000353909 MCF2L2Q86YR7 1114 aa17.08■□□□□ 0.33
MBD1-205ENST00000353909 RNF216Q9NWF9 866 aaPredicted RBP17.08■□□□□ 0.33
MBD1-205ENST00000353909 SAR1BQ9Y6B6 198 aa17.08■□□□□ 0.33
MBD1-205ENST00000353909 AFPP02771 609 aaKnown RBP17.08■□□□□ 0.32
MBD1-205ENST00000353909 PNMA6AP0CW24 399 aaPredicted RBP17.08■□□□□ 0.32
MBD1-205ENST00000353909 BCRP11274 1271 aa17.08■□□□□ 0.32
MBD1-205ENST00000353909 PON1P27169 355 aa17.08■□□□□ 0.32
MBD1-205ENST00000353909 MAGEA1P43355 309 aa17.08■□□□□ 0.32
MBD1-205ENST00000353909 BACE1P56817 501 aa17.08■□□□□ 0.32
MBD1-205ENST00000353909 PRKG1Q13976 671 aa17.08■□□□□ 0.32
MBD1-205ENST00000353909 UGCGQ16739 394 aa17.08■□□□□ 0.32
MBD1-205ENST00000353909 WHAMMP3Q1A5X7 153 aa17.08■□□□□ 0.32
MBD1-205ENST00000353909 PAPD7Q5XG87 772 aaKnown RBP17.08■□□□□ 0.32
MBD1-205ENST00000353909 GJB7Q6PEY0 223 aa17.08■□□□□ 0.32
MBD1-205ENST00000353909 DNAAF5Q86Y56 855 aa17.08■□□□□ 0.32
MBD1-205ENST00000353909 ZBTB9Q96C00 473 aa17.08■□□□□ 0.32
MBD1-205ENST00000353909 RMDN3Q96TC7 470 aa17.08■□□□□ 0.32
MBD1-205ENST00000353909 FAM53CQ9NYF3 392 aa17.08■□□□□ 0.32
MBD1-205ENST00000353909 CTAGE15A4D2H0 777 aa17.07■□□□□ 0.32
MBD1-205ENST00000353909 ARHGEF35A5YM69 484 aa17.07■□□□□ 0.32
MBD1-205ENST00000353909 TISP43B9A030 160 aa17.07■□□□□ 0.32
MBD1-205ENST00000353909 SASH3O75995 380 aa17.07■□□□□ 0.32
MBD1-205ENST00000353909 CTAGE8P0CG41 777 aa17.07■□□□□ 0.32
MBD1-205ENST00000353909 PTPRAP18433 802 aa17.07■□□□□ 0.32
MBD1-205ENST00000353909 CC2D1AQ6P1N0 951 aaPredicted RBP17.07■□□□□ 0.32
MBD1-205ENST00000353909 PADI6Q6TGC4 694 aa17.07■□□□□ 0.32
MBD1-205ENST00000353909 CTAGE6Q86UF2 777 aa17.07■□□□□ 0.32
MBD1-205ENST00000353909 CTAGE4Q8IX94 777 aa17.07■□□□□ 0.32
MBD1-205ENST00000353909 BORCS6Q96GS4 357 aa17.07■□□□□ 0.32
MBD1-205ENST00000353909 JADE2Q9NQC1 790 aa17.07■□□□□ 0.32
MBD1-205ENST00000353909 PCNTO95613 3336 aa17.07■□□□□ 0.32
MBD1-205ENST00000353909 A0A087X0T9 212 aa17.07■□□□□ 0.32
MBD1-205ENST00000353909 FAM228BP0C875 321 aa17.07■□□□□ 0.32
MBD1-205ENST00000353909 GHRHRQ02643 423 aa17.07■□□□□ 0.32
MBD1-205ENST00000353909 SLC9C1Q4G0N8 1177 aa17.07■□□□□ 0.32
MBD1-205ENST00000353909 UTP14CQ5TAP6 766 aaKnown RBP17.07■□□□□ 0.32
MBD1-205ENST00000353909 RNF207Q6ZRF8 634 aa17.07■□□□□ 0.32
MBD1-205ENST00000353909 SCYL3Q8IZE3 742 aa17.07■□□□□ 0.32
MBD1-205ENST00000353909 ARGLU1Q9NWB6 273 aaPredicted RBP17.07■□□□□ 0.32
MBD1-205ENST00000353909 PDE2AO00408 941 aaPredicted RBP17.06■□□□□ 0.32
MBD1-205ENST00000353909 BUB1O43683 1085 aa17.06■□□□□ 0.32
MBD1-205ENST00000353909 UCHL3P15374 230 aa17.06■□□□□ 0.32
MBD1-205ENST00000353909 CYP2J2P51589 502 aa17.06■□□□□ 0.32
MBD1-205ENST00000353909 MAPK8IP2Q13387 824 aaPredicted RBP17.06■□□□□ 0.32
MBD1-205ENST00000353909 BAATQ14032 418 aaPredicted RBP17.06■□□□□ 0.32
MBD1-205ENST00000353909 EXOC3L4Q17RC7 722 aa17.06■□□□□ 0.32
MBD1-205ENST00000353909 KCTD17Q8N5Z5 321 aa17.06■□□□□ 0.32
MBD1-205ENST00000353909 PSMB7Q99436 277 aa17.06■□□□□ 0.32
MBD1-205ENST00000353909 PDCD2LQ9BRP1 358 aa17.06■□□□□ 0.32
MBD1-205ENST00000353909 ADAMTS1Q9UHI8 967 aa17.06■□□□□ 0.32
MBD1-205ENST00000353909 TELO2Q9Y4R8 837 aa17.06■□□□□ 0.32
MBD1-205ENST00000353909 COL11A1P12107 1806 aaPredicted RBP17.06■□□□□ 0.32
MBD1-205ENST00000353909 TESPA1A2RU30 521 aaPredicted RBP17.06■□□□□ 0.32
MBD1-205ENST00000353909 SERPING1P05155 500 aa17.06■□□□□ 0.32
MBD1-205ENST00000353909 TUBB2AQ13885 445 aa17.06■□□□□ 0.32
MBD1-205ENST00000353909 RBM46Q8TBY0 533 aaKnown RBP17.06■□□□□ 0.32
MBD1-205ENST00000353909 TUBB2BQ9BVA1 445 aa17.06■□□□□ 0.32
MBD1-205ENST00000353909 CTDP1Q9Y5B0 961 aaPredicted RBP17.06■□□□□ 0.32
MBD1-205ENST00000353909 POLR2AP24928 1970 aaKnown RBP17.06■□□□□ 0.32
MBD1-205ENST00000353909 SSU72P8A0A1W2PR75 194 aa17.06■□□□□ 0.32
MBD1-205ENST00000353909 EIF3DO15371 548 aaKnown RBP eCLIP17.06■□□□□ 0.32
MBD1-205ENST00000353909 CCNE2O96020 404 aa17.06■□□□□ 0.32
MBD1-205ENST00000353909 EPB41P11171 864 aaKnown RBP17.06■□□□□ 0.32
MBD1-205ENST00000353909 RPL13P26373 211 aaKnown RBP17.06■□□□□ 0.32
MBD1-205ENST00000353909 KLHDC7AQ5VTJ3 777 aa17.06■□□□□ 0.32
MBD1-205ENST00000353909 RDH13Q8NBN7 331 aa17.06■□□□□ 0.32
MBD1-205ENST00000353909 ZNF280CQ8ND82 737 aa17.06■□□□□ 0.32
MBD1-205ENST00000353909 EHBP1Q8NDI1 1231 aa17.06■□□□□ 0.32
MBD1-205ENST00000353909 PACSIN1Q9BY11 444 aa17.06■□□□□ 0.32
MBD1-205ENST00000353909 SIX2Q9NPC8 291 aa17.06■□□□□ 0.32
MBD1-205ENST00000353909 PXMP2Q9NR77 195 aa17.06■□□□□ 0.32
MBD1-205ENST00000353909 RNF146Q9NTX7 359 aa17.06■□□□□ 0.32
MBD1-205ENST00000353909 PARP14Q460N5 1801 aa17.06■□□□□ 0.32
MBD1-205ENST00000353909 PEX10O60683 326 aa17.05■□□□□ 0.32
MBD1-205ENST00000353909 USO1O60763 962 aaKnown RBP17.05■□□□□ 0.32
MBD1-205ENST00000353909 ZBED4O75132 1171 aa17.05■□□□□ 0.32
MBD1-205ENST00000353909 TBC1D8O95759 1140 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms