RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 EAF2Q96CJ1 260 aaPredicted RBP10.72□□□□□ -0.69
COL11A1-201ENST00000353414 TMEM106CQ9BVX2 250 aa10.72□□□□□ -0.69
COL11A1-201ENST00000353414 NFKBIL1Q9UBC1 381 aaPredicted RBP10.72□□□□□ -0.69
COL11A1-201ENST00000353414 RIMBP3CA6NJZ7 1639 aa10.72□□□□□ -0.69
COL11A1-201ENST00000353414 RIMBP3BA6NNM3 1639 aa10.72□□□□□ -0.69
COL11A1-201ENST00000353414 ABCA5Q8WWZ7 1642 aa10.72□□□□□ -0.69
COL11A1-201ENST00000353414 RIMBP3Q9UFD9 1639 aa10.72□□□□□ -0.69
COL11A1-201ENST00000353414 SOWAHDA6NJG2 315 aa10.72□□□□□ -0.69
COL11A1-201ENST00000353414 CYP2D6P10635 497 aa10.72□□□□□ -0.69
COL11A1-201ENST00000353414 ATP5JP18859 108 aa10.72□□□□□ -0.69
COL11A1-201ENST00000353414 ARHGAP25P42331 645 aa10.72□□□□□ -0.69
COL11A1-201ENST00000353414 ELMSAN1Q6PJG2 1045 aa10.72□□□□□ -0.69
COL11A1-201ENST00000353414 C1orf131Q8NDD1 294 aaKnown RBP10.72□□□□□ -0.69
COL11A1-201ENST00000353414 BCAS4Q8TDM0 211 aa10.72□□□□□ -0.69
COL11A1-201ENST00000353414 IL9RQ01113 521 aa10.72□□□□□ -0.69
COL11A1-201ENST00000353414 CATSPER3Q86XQ3 398 aa10.72□□□□□ -0.69
COL11A1-201ENST00000353414 FAM213AQ9BRX8 229 aa10.72□□□□□ -0.69
COL11A1-201ENST00000353414 PYGLP06737 847 aa10.72□□□□□ -0.69
COL11A1-201ENST00000353414 PLA2G4BP0C869 781 aa10.72□□□□□ -0.69
COL11A1-201ENST00000353414 NNMTP40261 264 aa10.72□□□□□ -0.69
COL11A1-201ENST00000353414 POLE2P56282 527 aa10.72□□□□□ -0.69
COL11A1-201ENST00000353414 COBLL1Q53SF7 1204 aa10.72□□□□□ -0.69
COL11A1-201ENST00000353414 MDH1BQ5I0G3 518 aa10.72□□□□□ -0.69
COL11A1-201ENST00000353414 SIX5Q8N196 739 aa10.72□□□□□ -0.69
COL11A1-201ENST00000353414 ADAM33Q9BZ11 813 aa10.72□□□□□ -0.69
COL11A1-201ENST00000353414 SP110Q9HB58 689 aa10.72□□□□□ -0.69
COL11A1-201ENST00000353414 ARMCX2Q7L311 632 aa10.71□□□□□ -0.69
COL11A1-201ENST00000353414 RASSF3Q86WH2 238 aa10.71□□□□□ -0.69
COL11A1-201ENST00000353414 MKRN4PQ13434 485 aaPredicted RBP10.71□□□□□ -0.69
COL11A1-201ENST00000353414 FLOT2Q14254 428 aa10.71□□□□□ -0.69
COL11A1-201ENST00000353414 CC2D2BQ6DHV5 1058 aa10.71□□□□□ -0.69
COL11A1-201ENST00000353414 UNC5CLQ8IV45 518 aa10.71□□□□□ -0.69
COL11A1-201ENST00000353414 TTLL6Q8N841 843 aa10.71□□□□□ -0.69
COL11A1-201ENST00000353414 EPN1Q9Y6I3 576 aaPredicted RBP10.71□□□□□ -0.69
COL11A1-201ENST00000353414 PEG3Q9GZU2 1588 aa10.71□□□□□ -0.69
COL11A1-201ENST00000353414 PPP3CCP48454 512 aa10.71□□□□□ -0.69
COL11A1-201ENST00000353414 TSPY1Q01534 308 aa10.71□□□□□ -0.69
COL11A1-201ENST00000353414 SNRNP48Q6IEG0 339 aaKnown RBP10.71□□□□□ -0.69
COL11A1-201ENST00000353414 ZNF589Q86UQ0 364 aaPredicted RBP10.71□□□□□ -0.69
COL11A1-201ENST00000353414 EXOC8Q8IYI6 725 aa10.71□□□□□ -0.69
COL11A1-201ENST00000353414 AIFM3Q96NN9 605 aa10.71□□□□□ -0.69
COL11A1-201ENST00000353414 SLC13A1Q9BZW2 595 aa10.71□□□□□ -0.69
COL11A1-201ENST00000353414 SENP1Q9P0U3 644 aa10.71□□□□□ -0.69
COL11A1-201ENST00000353414 RPRD2Q5VT52 1461 aaKnown RBP10.71□□□□□ -0.7
COL11A1-201ENST00000353414 ASPRV1Q53RT3 343 aa10.71□□□□□ -0.7
COL11A1-201ENST00000353414 IL31Q6EBC2 164 aa10.71□□□□□ -0.7
COL11A1-201ENST00000353414 NMT2O60551 498 aa10.71□□□□□ -0.7
COL11A1-201ENST00000353414 SPAG7O75391 227 aa10.71□□□□□ -0.7
COL11A1-201ENST00000353414 TUBB4AP04350 444 aa10.71□□□□□ -0.7
COL11A1-201ENST00000353414 PLCG1P19174 1290 aa10.71□□□□□ -0.7
COL11A1-201ENST00000353414 CASP1P29466 404 aa10.71□□□□□ -0.7
COL11A1-201ENST00000353414 CSE1LP55060 971 aaKnown RBP10.71□□□□□ -0.7
COL11A1-201ENST00000353414 PYROXD1Q8WU10 500 aa10.71□□□□□ -0.7
COL11A1-201ENST00000353414 SH2D3AQ9BRG2 576 aa10.71□□□□□ -0.7
COL11A1-201ENST00000353414 KLHL11Q9NVR0 708 aa10.71□□□□□ -0.7
COL11A1-201ENST00000353414 COL17A1Q9UMD9 1497 aaPredicted RBP10.7□□□□□ -0.7
COL11A1-201ENST00000353414 HSPA4LO95757 839 aa10.7□□□□□ -0.7
COL11A1-201ENST00000353414 PDIA3P30101 505 aaKnown RBP10.7□□□□□ -0.7
COL11A1-201ENST00000353414 RAP1GDS1P52306 607 aa10.7□□□□□ -0.7
COL11A1-201ENST00000353414 LRRC74AQ0VAA2 488 aa10.7□□□□□ -0.7
COL11A1-201ENST00000353414 ATG16L1Q676U5 607 aa10.7□□□□□ -0.7
COL11A1-201ENST00000353414 ULK4Q96C45 1275 aa10.7□□□□□ -0.7
COL11A1-201ENST00000353414 TRPV6Q9H1D0 765 aa10.7□□□□□ -0.7
COL11A1-201ENST00000353414 VPS11Q9H270 941 aa10.7□□□□□ -0.7
COL11A1-201ENST00000353414 STRIP2Q9ULQ0 834 aa10.7□□□□□ -0.7
COL11A1-201ENST00000353414 ZBTB12Q9Y330 459 aaPredicted RBP10.7□□□□□ -0.7
COL11A1-201ENST00000353414 GOLGA8KD6RF30 607 aa10.7□□□□□ -0.7
COL11A1-201ENST00000353414 RBM6P78332 1123 aaKnown RBP10.7□□□□□ -0.7
COL11A1-201ENST00000353414 MTMR1Q13613 665 aa10.7□□□□□ -0.7
COL11A1-201ENST00000353414 NDUFAF2Q8N183 169 aa10.7□□□□□ -0.7
COL11A1-201ENST00000353414 SLC26A7Q8TE54 656 aa10.7□□□□□ -0.7
COL11A1-201ENST00000353414 PARVGQ9HBI0 331 aa10.7□□□□□ -0.7
COL11A1-201ENST00000353414 SERPINB13Q9UIV8 391 aa10.7□□□□□ -0.7
COL11A1-201ENST00000353414 EXOC1LA0A1B0GW35 172 aa10.7□□□□□ -0.7
COL11A1-201ENST00000353414 FAM47DPA6NHR8 397 aa10.7□□□□□ -0.7
COL11A1-201ENST00000353414 TBC1D12O60347 775 aa10.7□□□□□ -0.7
COL11A1-201ENST00000353414 SF3B3Q15393 1217 aaKnown RBP10.7□□□□□ -0.7
COL11A1-201ENST00000353414 STXBP2Q15833 593 aa10.7□□□□□ -0.7
COL11A1-201ENST00000353414 TMEM63CQ9P1W3 806 aa10.7□□□□□ -0.7
COL11A1-201ENST00000353414 PCDHA5Q9Y5H7 936 aa10.7□□□□□ -0.7
COL11A1-201ENST00000353414 ZCCHC11Q5TAX3 1644 aaKnown RBP10.7□□□□□ -0.7
COL11A1-201ENST00000353414 SLC16A4O15374 487 aa10.7□□□□□ -0.7
COL11A1-201ENST00000353414 WBP4O75554 376 aaKnown RBP10.7□□□□□ -0.7
COL11A1-201ENST00000353414 ECEL1O95672 775 aa10.7□□□□□ -0.7
COL11A1-201ENST00000353414 STAT3P40763 770 aa10.7□□□□□ -0.7
COL11A1-201ENST00000353414 PMS1P54277 932 aaKnown RBP10.7□□□□□ -0.7
COL11A1-201ENST00000353414 CC2D1AQ6P1N0 951 aaPredicted RBP10.7□□□□□ -0.7
COL11A1-201ENST00000353414 SPATA33Q96N06 139 aa10.7□□□□□ -0.7
COL11A1-201ENST00000353414 ELP3Q9H9T3 547 aa10.7□□□□□ -0.7
COL11A1-201ENST00000353414 PIM2Q9P1W9 311 aa10.7□□□□□ -0.7
COL11A1-201ENST00000353414 PI4KBQ9UBF8 816 aa10.7□□□□□ -0.7
COL11A1-201ENST00000353414 UGGT1Q9NYU2 1555 aa10.7□□□□□ -0.7
COL11A1-201ENST00000353414 CDK8P49336 464 aa10.7□□□□□ -0.7
COL11A1-201ENST00000353414 NLRP11P59045 1033 aaKnown RBP10.7□□□□□ -0.7
COL11A1-201ENST00000353414 SLC10A5Q5PT55 438 aa10.7□□□□□ -0.7
COL11A1-201ENST00000353414 PUS7LQ9H0K6 701 aaKnown RBP10.7□□□□□ -0.7
COL11A1-201ENST00000353414 ARIH2O95376 493 aa10.7□□□□□ -0.7
COL11A1-201ENST00000353414 BRD1O95696 1058 aa10.7□□□□□ -0.7
COL11A1-201ENST00000353414 CHEK2O96017 543 aa10.7□□□□□ -0.7
COL11A1-201ENST00000353414 ZSCAN26Q16670 478 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms