RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 ESPNB1AK53 854 aa20.64■□□□□ 0.89
PTN-201ENST00000348225 EIF3DO15371 548 aaKnown RBP eCLIP20.64■□□□□ 0.89
PTN-201ENST00000348225 GCNT3O95395 438 aa20.64■□□□□ 0.89
PTN-201ENST00000348225 MSNP26038 577 aaKnown RBP20.64■□□□□ 0.89
PTN-201ENST00000348225 COPB1P53618 953 aaKnown RBP20.64■□□□□ 0.89
PTN-201ENST00000348225 PRKCEQ02156 737 aa20.64■□□□□ 0.89
PTN-201ENST00000348225 TTLL4Q14679 1199 aa20.64■□□□□ 0.89
PTN-201ENST00000348225 CCDC144BQ3MJ40 725 aa20.64■□□□□ 0.89
PTN-201ENST00000348225 ZCWPW2Q504Y3 356 aa20.64■□□□□ 0.89
PTN-201ENST00000348225 UTP14CQ5TAP6 766 aaKnown RBP20.64■□□□□ 0.89
PTN-201ENST00000348225 ANO5Q75V66 913 aa20.64■□□□□ 0.89
PTN-201ENST00000348225 IRF2BP1Q8IU81 584 aa20.64■□□□□ 0.89
PTN-201ENST00000348225 CREBRFQ8IUR6 639 aa20.64■□□□□ 0.89
PTN-201ENST00000348225 NELFCDQ8IXH7 590 aa20.64■□□□□ 0.89
PTN-201ENST00000348225 FAM178BQ8IXR5 827 aa20.64■□□□□ 0.89
PTN-201ENST00000348225 DRC1Q96MC2 740 aa20.64■□□□□ 0.89
PTN-201ENST00000348225 VTA1Q9NP79 307 aa20.64■□□□□ 0.89
PTN-201ENST00000348225 RTN4Q9NQC3 1192 aaKnown RBP20.64■□□□□ 0.89
PTN-201ENST00000348225 SLC5A4Q9NY91 659 aa20.64■□□□□ 0.89
PTN-201ENST00000348225 LARSQ9P2J5 1176 aaKnown RBP20.64■□□□□ 0.89
PTN-201ENST00000348225 ARID2Q68CP9 1835 aa20.63■□□□□ 0.89
PTN-201ENST00000348225 SLC15A5A6NIM6 579 aa20.63■□□□□ 0.89
PTN-201ENST00000348225 TMEM88BA6NKF7 163 aa20.63■□□□□ 0.89
PTN-201ENST00000348225 FAM155AB1AL88 458 aaPredicted RBP20.63■□□□□ 0.89
PTN-201ENST00000348225 N4BP3O15049 544 aa20.63■□□□□ 0.89
PTN-201ENST00000348225 ZNF862O60290 1169 aa20.63■□□□□ 0.89
PTN-201ENST00000348225 LY6KQ17RY6 165 aa20.63■□□□□ 0.89
PTN-201ENST00000348225 XKR3Q5GH77 459 aa20.63■□□□□ 0.89
PTN-201ENST00000348225 ODR4Q5SWX8 454 aa20.63■□□□□ 0.89
PTN-201ENST00000348225 FAM160B1Q5W0V3 765 aa20.63■□□□□ 0.89
PTN-201ENST00000348225 PLA2G4FQ68DD2 849 aa20.63■□□□□ 0.89
PTN-201ENST00000348225 SCFD2Q8WU76 684 aa20.63■□□□□ 0.89
PTN-201ENST00000348225 CEP170P1Q96L14 293 aa20.63■□□□□ 0.89
PTN-201ENST00000348225 CNOT6LQ96LI5 555 aaKnown RBP20.63■□□□□ 0.89
PTN-201ENST00000348225 SEPT9Q9UHD8 586 aaPredicted RBP20.63■□□□□ 0.89
PTN-201ENST00000348225 MAFBQ9Y5Q3 323 aaPredicted RBP20.63■□□□□ 0.89
PTN-201ENST00000348225 IGKV6D-21A0A0A0MT36 114 aa20.62■□□□□ 0.89
PTN-201ENST00000348225 SFI1A8K8P3 1242 aa20.62■□□□□ 0.89
PTN-201ENST00000348225 MYBP10242 640 aa20.62■□□□□ 0.89
PTN-201ENST00000348225 MAPTP10636 758 aaKnown RBP20.62■□□□□ 0.89
PTN-201ENST00000348225 CASP5P51878 434 aa20.62■□□□□ 0.89
PTN-201ENST00000348225 FKBP3Q00688 224 aaKnown RBP20.62■□□□□ 0.89
PTN-201ENST00000348225 MAPK7Q13164 816 aa20.62■□□□□ 0.89
PTN-201ENST00000348225 KNOP1Q1ED39 458 aaKnown RBP20.62■□□□□ 0.89
PTN-201ENST00000348225 CELF3Q5SZQ8 465 aaKnown RBP20.62■□□□□ 0.89
PTN-201ENST00000348225 CCDC150Q8NCX0 1101 aa20.62■□□□□ 0.89
PTN-201ENST00000348225 ZNF507Q8TCN5 953 aa20.62■□□□□ 0.89
PTN-201ENST00000348225 SEPT1Q8WYJ6 367 aa20.62■□□□□ 0.89
PTN-201ENST00000348225 KCTD10Q9H3F6 313 aa20.62■□□□□ 0.89
PTN-201ENST00000348225 ZFYVE28Q9HCC9 887 aa20.62■□□□□ 0.89
PTN-201ENST00000348225 TAB2Q9NYJ8 693 aa20.62■□□□□ 0.89
PTN-201ENST00000348225 TELO2Q9Y4R8 837 aa20.62■□□□□ 0.89
PTN-201ENST00000348225 TMEM150BA6NC51 233 aa20.61■□□□□ 0.89
PTN-201ENST00000348225 CALUO43852 315 aaPredicted RBP20.61■□□□□ 0.89
PTN-201ENST00000348225 STBD1O95210 358 aa20.61■□□□□ 0.89
PTN-201ENST00000348225 ARIH2O95376 493 aa20.61■□□□□ 0.89
PTN-201ENST00000348225 NPEPPSP55786 919 aa20.61■□□□□ 0.89
PTN-201ENST00000348225 ALCAMQ13740 583 aa20.61■□□□□ 0.89
PTN-201ENST00000348225 EDRF1Q3B7T1 1238 aa20.61■□□□□ 0.89
PTN-201ENST00000348225 SPECC1LQ69YQ0 1117 aa20.61■□□□□ 0.89
PTN-201ENST00000348225 CCDC62Q6P9F0 684 aa20.61■□□□□ 0.89
PTN-201ENST00000348225 MAMDC4Q6UXC1 1216 aa20.61■□□□□ 0.89
PTN-201ENST00000348225 DHX37Q8IY37 1157 aaKnown RBP20.61■□□□□ 0.89
PTN-201ENST00000348225 DAW1Q8N136 415 aa20.61■□□□□ 0.89
PTN-201ENST00000348225 CEP63Q96MT8 703 aa20.61■□□□□ 0.89
PTN-201ENST00000348225 POLD4Q9HCU8 107 aa20.61■□□□□ 0.89
PTN-201ENST00000348225 GSTTP1A0A1W2PQM5 241 aa20.6■□□□□ 0.89
PTN-201ENST00000348225 NOP56O00567 594 aaKnown RBP20.6■□□□□ 0.89
PTN-201ENST00000348225 TLR2O60603 784 aa20.6■□□□□ 0.89
PTN-201ENST00000348225 OATP04181 439 aa20.6■□□□□ 0.89
PTN-201ENST00000348225 TXNP10599 105 aaKnown RBP20.6■□□□□ 0.89
PTN-201ENST00000348225 MTIF2P46199 727 aaKnown RBP20.6■□□□□ 0.89
PTN-201ENST00000348225 LRRC55Q6ZSA7 311 aa20.6■□□□□ 0.89
PTN-201ENST00000348225 TRMT1LQ7Z2T5 733 aaKnown RBP20.6■□□□□ 0.89
PTN-201ENST00000348225 SLC17A8Q8NDX2 589 aa20.6■□□□□ 0.89
PTN-201ENST00000348225 AFAP1L1Q8TED9 768 aa20.6■□□□□ 0.89
PTN-201ENST00000348225 VPS16Q9H269 839 aa20.6■□□□□ 0.89
PTN-201ENST00000348225 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.6■□□□□ 0.89
PTN-201ENST00000348225 PCDHB13Q9Y5F0 798 aa20.6■□□□□ 0.89
PTN-201ENST00000348225 PDXKO00764 312 aa20.6■□□□□ 0.89
PTN-201ENST00000348225 DGAT1O75907 488 aa20.6■□□□□ 0.89
PTN-201ENST00000348225 PRPF6O94906 941 aaKnown RBP20.6■□□□□ 0.89
PTN-201ENST00000348225 GNA14O95837 355 aa20.6■□□□□ 0.89
PTN-201ENST00000348225 PLS3P13797 630 aa20.6■□□□□ 0.89
PTN-201ENST00000348225 NMT1P30419 496 aaKnown RBP20.6■□□□□ 0.89
PTN-201ENST00000348225 TCF7P36402 384 aaPredicted RBP20.6■□□□□ 0.89
PTN-201ENST00000348225 MAEAQ7L5Y9 396 aa20.6■□□□□ 0.89
PTN-201ENST00000348225 ZNF720Q7Z2F6 126 aa20.6■□□□□ 0.89
PTN-201ENST00000348225 MSL3Q8N5Y2 521 aaKnown RBP20.6■□□□□ 0.89
PTN-201ENST00000348225 MCPH1Q8NEM0 835 aa20.6■□□□□ 0.89
PTN-201ENST00000348225 MAML3Q96JK9 1138 aa20.6■□□□□ 0.89
PTN-201ENST00000348225 ZNF830Q96NB3 372 aaPredicted RBP20.6■□□□□ 0.89
PTN-201ENST00000348225 TUBGCP2Q9BSJ2 902 aa20.6■□□□□ 0.89
PTN-201ENST00000348225 AZI2Q9H6S1 392 aa20.6■□□□□ 0.89
PTN-201ENST00000348225 CYP26B1Q9NR63 512 aa20.6■□□□□ 0.89
PTN-201ENST00000348225 TYW1Q9NV66 732 aaKnown RBP20.6■□□□□ 0.89
PTN-201ENST00000348225 TRAF3IP3Q9Y228 551 aa20.6■□□□□ 0.89
PTN-201ENST00000348225 PRKCSHP14314 528 aaPredicted RBP20.59■□□□□ 0.89
PTN-201ENST00000348225 STAT5BP51692 787 aa20.59■□□□□ 0.89
PTN-201ENST00000348225 C17orf99Q6UX52 265 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms