RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 VIRMAQ69YN4 1812 aaKnown RBP11.77□□□□□ -0.53
CLCN6-202ENST00000346436 TTC26A0AVF1 554 aa11.77□□□□□ -0.53
CLCN6-202ENST00000346436 S100BP04271 92 aaPredicted RBP11.77□□□□□ -0.53
CLCN6-202ENST00000346436 RPLP2P05387 115 aaKnown RBP11.77□□□□□ -0.53
CLCN6-202ENST00000346436 MXRA7P84157 204 aa11.77□□□□□ -0.53
CLCN6-202ENST00000346436 PSMD2Q13200 908 aa11.77□□□□□ -0.53
CLCN6-202ENST00000346436 LLGL1Q15334 1064 aa11.77□□□□□ -0.53
CLCN6-202ENST00000346436 RBM43Q6ZSC3 357 aaKnown RBP11.77□□□□□ -0.53
CLCN6-202ENST00000346436 ILDR1Q86SU0 546 aaPredicted RBP11.77□□□□□ -0.53
CLCN6-202ENST00000346436 SYCE1Q8N0S2 351 aa11.77□□□□□ -0.53
CLCN6-202ENST00000346436 TC2NQ8N9U0 490 aa11.77□□□□□ -0.53
CLCN6-202ENST00000346436 ZNF579Q8NAF0 562 aaKnown RBP11.77□□□□□ -0.53
CLCN6-202ENST00000346436 SKA2Q8WVK7 121 aaPredicted RBP11.77□□□□□ -0.53
CLCN6-202ENST00000346436 RPGRIP1Q96KN7 1286 aa11.77□□□□□ -0.53
CLCN6-202ENST00000346436 CHP1Q99653 195 aa11.77□□□□□ -0.53
CLCN6-202ENST00000346436 TBC1D22BQ9NU19 505 aa11.77□□□□□ -0.53
CLCN6-202ENST00000346436 SNAP25P60880 206 aa11.76□□□□□ -0.53
CLCN6-202ENST00000346436 DHTKD1Q96HY7 919 aaPredicted RBP11.76□□□□□ -0.53
CLCN6-202ENST00000346436 DYRK4Q9NR20 520 aa11.76□□□□□ -0.53
CLCN6-202ENST00000346436 FAM50BQ9Y247 325 aa11.76□□□□□ -0.53
CLCN6-202ENST00000346436 CDHR2Q9BYE9 1310 aa11.76□□□□□ -0.53
CLCN6-202ENST00000346436 ATP8B1O43520 1251 aa11.76□□□□□ -0.53
CLCN6-202ENST00000346436 ZWINTO95229 277 aa11.76□□□□□ -0.53
CLCN6-202ENST00000346436 CDK8P49336 464 aa11.76□□□□□ -0.53
CLCN6-202ENST00000346436 KRT76Q01546 638 aa11.76□□□□□ -0.53
CLCN6-202ENST00000346436 COG2Q14746 738 aa11.76□□□□□ -0.53
CLCN6-202ENST00000346436 SRBD1Q8N5C6 995 aaKnown RBP11.76□□□□□ -0.53
CLCN6-202ENST00000346436 FAM133AQ8N9E0 248 aa11.76□□□□□ -0.53
CLCN6-202ENST00000346436 LPAR1Q92633 364 aa11.76□□□□□ -0.53
CLCN6-202ENST00000346436 NLRP4Q96MN2 994 aa11.76□□□□□ -0.53
CLCN6-202ENST00000346436 NCAPGQ9BPX3 1015 aa11.76□□□□□ -0.53
CLCN6-202ENST00000346436 EFCC1Q9HA90 598 aa11.76□□□□□ -0.53
CLCN6-202ENST00000346436 EPB41L5Q9HCM4 733 aa11.76□□□□□ -0.53
CLCN6-202ENST00000346436 FEZ2Q9UHY8 353 aaPredicted RBP11.76□□□□□ -0.53
CLCN6-202ENST00000346436 TUBE1Q9UJT0 475 aa11.76□□□□□ -0.53
CLCN6-202ENST00000346436 LDHAP00338 332 aaKnown RBP11.76□□□□□ -0.53
CLCN6-202ENST00000346436 CTNNA1P35221 906 aaKnown RBP11.76□□□□□ -0.53
CLCN6-202ENST00000346436 GCLCP48506 637 aaPredicted RBP11.76□□□□□ -0.53
CLCN6-202ENST00000346436 FXR1P51114 621 aaKnown RBP eCLIP11.76□□□□□ -0.53
CLCN6-202ENST00000346436 KYAT1Q16773 422 aa11.76□□□□□ -0.53
CLCN6-202ENST00000346436 KRT71Q3SY84 523 aa11.76□□□□□ -0.53
CLCN6-202ENST00000346436 CASC4Q6P4E1 433 aa11.76□□□□□ -0.53
CLCN6-202ENST00000346436 RAD9BQ6WBX8 426 aa11.76□□□□□ -0.53
CLCN6-202ENST00000346436 MINPP1Q9UNW1 487 aa11.76□□□□□ -0.53
CLCN6-202ENST00000346436 POTEMA6NI47 508 aa11.76□□□□□ -0.53
CLCN6-202ENST00000346436 KRIT1O00522 736 aa11.76□□□□□ -0.53
CLCN6-202ENST00000346436 EPHB1P54762 984 aa11.76□□□□□ -0.53
CLCN6-202ENST00000346436 TADA2BQ86TJ2 420 aa11.76□□□□□ -0.53
CLCN6-202ENST00000346436 MCPH1Q8NEM0 835 aa11.76□□□□□ -0.53
CLCN6-202ENST00000346436 DDX50Q9BQ39 737 aaKnown RBP11.76□□□□□ -0.53
CLCN6-202ENST00000346436 MED4Q9NPJ6 270 aa11.76□□□□□ -0.53
CLCN6-202ENST00000346436 NEMP1O14524 444 aa11.76□□□□□ -0.53
CLCN6-202ENST00000346436 CCNE1P24864 410 aa11.76□□□□□ -0.53
CLCN6-202ENST00000346436 PGBD3Q8N328 593 aa11.76□□□□□ -0.53
CLCN6-202ENST00000346436 DCP1AQ9NPI6 582 aaPredicted RBP11.76□□□□□ -0.53
CLCN6-202ENST00000346436 TMEM260Q9NX78 707 aa11.76□□□□□ -0.53
CLCN6-202ENST00000346436 PCDHA13Q9Y5I0 950 aa11.76□□□□□ -0.53
CLCN6-202ENST00000346436 PNMA6FA0A0J9YX94 578 aa11.75□□□□□ -0.53
CLCN6-202ENST00000346436 TCP1P17987 556 aaKnown RBP11.75□□□□□ -0.53
CLCN6-202ENST00000346436 MARK3P27448 753 aa11.75□□□□□ -0.53
CLCN6-202ENST00000346436 HOXA7P31268 230 aaPredicted RBP11.75□□□□□ -0.53
CLCN6-202ENST00000346436 PFKFB3Q16875 520 aaPredicted RBP11.75□□□□□ -0.53
CLCN6-202ENST00000346436 ARL13BQ3SXY8 428 aa11.75□□□□□ -0.53
CLCN6-202ENST00000346436 FAM83BQ5T0W9 1011 aa11.75□□□□□ -0.53
CLCN6-202ENST00000346436 IER5Q5VY09 327 aa11.75□□□□□ -0.53
CLCN6-202ENST00000346436 RINT1Q6NUQ1 792 aa11.75□□□□□ -0.53
CLCN6-202ENST00000346436 BEST2Q8NFU1 509 aa11.75□□□□□ -0.53
CLCN6-202ENST00000346436 RAB20Q9NX57 234 aa11.75□□□□□ -0.53
CLCN6-202ENST00000346436 STRIP2Q9ULQ0 834 aa11.75□□□□□ -0.53
CLCN6-202ENST00000346436 PPP2R3BQ9Y5P8 575 aa11.75□□□□□ -0.53
CLCN6-202ENST00000346436 NCK2O43639 380 aa11.75□□□□□ -0.53
CLCN6-202ENST00000346436 ATP5DP30049 168 aa11.75□□□□□ -0.53
CLCN6-202ENST00000346436 RAD51Q06609 339 aa11.75□□□□□ -0.53
CLCN6-202ENST00000346436 BFSP2Q13515 415 aa11.75□□□□□ -0.53
CLCN6-202ENST00000346436 NME8Q8N427 588 aa11.75□□□□□ -0.53
CLCN6-202ENST00000346436 ARMCX3Q9UH62 379 aaPredicted RBP11.75□□□□□ -0.53
CLCN6-202ENST00000346436 CLIC2O15247 247 aa11.75□□□□□ -0.53
CLCN6-202ENST00000346436 PTK2Q05397 1052 aa11.75□□□□□ -0.53
CLCN6-202ENST00000346436 CCDC15Q0P6D6 951 aa11.75□□□□□ -0.53
CLCN6-202ENST00000346436 MGARPQ8TDB4 240 aa11.75□□□□□ -0.53
CLCN6-202ENST00000346436 RAVER2Q9HCJ3 691 aaKnown RBP11.75□□□□□ -0.53
CLCN6-202ENST00000346436 SIGLEC1Q9BZZ2 1709 aa11.75□□□□□ -0.53
CLCN6-202ENST00000346436 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.75□□□□□ -0.53
CLCN6-202ENST00000346436 ACTN4O43707 911 aaKnown RBP11.75□□□□□ -0.53
CLCN6-202ENST00000346436 ATP1A1P05023 1023 aaKnown RBP11.75□□□□□ -0.53
CLCN6-202ENST00000346436 GBP1P32455 592 aa11.75□□□□□ -0.53
CLCN6-202ENST00000346436 STAT1P42224 750 aa11.75□□□□□ -0.53
CLCN6-202ENST00000346436 ZBED6P86452 979 aa11.75□□□□□ -0.53
CLCN6-202ENST00000346436 MYL7Q01449 175 aa11.75□□□□□ -0.53
CLCN6-202ENST00000346436 ALX1Q15699 326 aa11.75□□□□□ -0.53
CLCN6-202ENST00000346436 ANKS4BQ8N8V4 417 aa11.75□□□□□ -0.53
CLCN6-202ENST00000346436 ZNF280CQ8ND82 737 aa11.75□□□□□ -0.53
CLCN6-202ENST00000346436 SPATA33Q96N06 139 aa11.75□□□□□ -0.53
CLCN6-202ENST00000346436 NT5C1BQ96P26 610 aa11.75□□□□□ -0.53
CLCN6-202ENST00000346436 RRAGCQ9HB90 399 aa11.75□□□□□ -0.53
CLCN6-202ENST00000346436 CAPN7Q9Y6W3 813 aa11.75□□□□□ -0.53
CLCN6-202ENST00000346436 CCDC85CA6NKD9 419 aa11.74□□□□□ -0.53
CLCN6-202ENST00000346436 ENTPD3O75355 529 aa11.74□□□□□ -0.53
CLCN6-202ENST00000346436 CYBBP04839 570 aa11.74□□□□□ -0.53
CLCN6-202ENST00000346436 SUPT20HL2P0C7V6 817 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms