RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 CYP2C9P11712 490 aa17.79■□□□□ 0.44
SMARCA4-201ENST00000344626 ACTN1P12814 892 aa17.79■□□□□ 0.44
SMARCA4-201ENST00000344626 KYAT1Q16773 422 aa17.79■□□□□ 0.44
SMARCA4-201ENST00000344626 APOBEC3HQ6NTF7 200 aaKnown RBP17.79■□□□□ 0.44
SMARCA4-201ENST00000344626 RNF149Q8NC42 400 aa17.79■□□□□ 0.44
SMARCA4-201ENST00000344626 OXER1Q8TDS5 423 aa17.79■□□□□ 0.44
SMARCA4-201ENST00000344626 NR2E3Q9Y5X4 410 aa17.79■□□□□ 0.44
SMARCA4-201ENST00000344626 IRF6O14896 467 aa17.78■□□□□ 0.44
SMARCA4-201ENST00000344626 HMX1Q9NP08 348 aaPredicted RBP17.78■□□□□ 0.44
SMARCA4-201ENST00000344626 PVALEFA0A1B0GWK0 134 aa17.78■□□□□ 0.44
SMARCA4-201ENST00000344626 POTEB3A0JP26 581 aa17.78■□□□□ 0.44
SMARCA4-201ENST00000344626 A6NJR5 290 aa17.78■□□□□ 0.44
SMARCA4-201ENST00000344626 RAG1P15918 1043 aa17.78■□□□□ 0.44
SMARCA4-201ENST00000344626 SARNPP82979 210 aaKnown RBP17.78■□□□□ 0.44
SMARCA4-201ENST00000344626 POTEBQ6S5H4 581 aa17.78■□□□□ 0.44
SMARCA4-201ENST00000344626 CCDC105Q8IYK2 499 aa17.78■□□□□ 0.44
SMARCA4-201ENST00000344626 SPATC1LQ9H0A9 340 aa17.78■□□□□ 0.44
SMARCA4-201ENST00000344626 LRRC4Q9HBW1 653 aa17.78■□□□□ 0.44
SMARCA4-201ENST00000344626 COL3A1P02461 1466 aaPredicted RBP17.78■□□□□ 0.44
SMARCA4-201ENST00000344626 RHOXF2BP0C7M4 288 aa17.78■□□□□ 0.44
SMARCA4-201ENST00000344626 MRFAP1L1Q96HT8 127 aa17.78■□□□□ 0.44
SMARCA4-201ENST00000344626 CAPNS2Q96L46 248 aa17.78■□□□□ 0.44
SMARCA4-201ENST00000344626 RHOXF2Q9BQY4 288 aa17.78■□□□□ 0.44
SMARCA4-201ENST00000344626 POTECB2RU33 542 aa17.78■□□□□ 0.44
SMARCA4-201ENST00000344626 COBLO75128 1261 aa17.78■□□□□ 0.44
SMARCA4-201ENST00000344626 BFSP1Q12934 665 aa17.78■□□□□ 0.44
SMARCA4-201ENST00000344626 GRAMD1CQ8IYS0 662 aa17.78■□□□□ 0.44
SMARCA4-201ENST00000344626 IGDCC4Q8TDY8 1250 aa17.78■□□□□ 0.44
SMARCA4-201ENST00000344626 ASCC2Q9H1I8 757 aaPredicted RBP17.78■□□□□ 0.44
SMARCA4-201ENST00000344626 TUFT1Q9NNX1 390 aa17.78■□□□□ 0.44
SMARCA4-201ENST00000344626 PPP2R5EQ16537 467 aa17.77■□□□□ 0.44
SMARCA4-201ENST00000344626 TAAR1Q96RJ0 339 aa17.77■□□□□ 0.44
SMARCA4-201ENST00000344626 EHD4Q9H223 541 aa17.77■□□□□ 0.44
SMARCA4-201ENST00000344626 SALL1Q9NSC2 1324 aa17.77■□□□□ 0.44
SMARCA4-201ENST00000344626 MAFGO15525 162 aa17.77■□□□□ 0.44
SMARCA4-201ENST00000344626 IVLP07476 585 aa17.77■□□□□ 0.44
SMARCA4-201ENST00000344626 CD58P19256 250 aa17.77■□□□□ 0.44
SMARCA4-201ENST00000344626 SCN4BQ8IWT1 228 aa17.77■□□□□ 0.44
SMARCA4-201ENST00000344626 OR6B3Q8NGW1 331 aa17.77■□□□□ 0.44
SMARCA4-201ENST00000344626 RSAD2Q8WXG1 361 aa17.77■□□□□ 0.44
SMARCA4-201ENST00000344626 TIPINQ9BVW5 301 aa17.77■□□□□ 0.44
SMARCA4-201ENST00000344626 POLR1AO95602 1720 aaPredicted RBP17.77■□□□□ 0.44
SMARCA4-201ENST00000344626 DPYSL4O14531 572 aa17.77■□□□□ 0.44
SMARCA4-201ENST00000344626 SLC16A4O15374 487 aa17.77■□□□□ 0.44
SMARCA4-201ENST00000344626 FKBP1AP62942 108 aaKnown RBP17.77■□□□□ 0.44
SMARCA4-201ENST00000344626 SCARA5Q6ZMJ2 495 aa17.77■□□□□ 0.44
SMARCA4-201ENST00000344626 BEST2Q8NFU1 509 aa17.77■□□□□ 0.44
SMARCA4-201ENST00000344626 PPP1R9AQ9ULJ8 1098 aa17.77■□□□□ 0.44
SMARCA4-201ENST00000344626 E9PMD0 336 aa17.77■□□□□ 0.43
SMARCA4-201ENST00000344626 ENOX1Q8TC92 643 aaKnown RBP17.77■□□□□ 0.43
SMARCA4-201ENST00000344626 TMX2Q9Y320 296 aa17.77■□□□□ 0.43
SMARCA4-201ENST00000344626 POLR3GO15318 223 aaPredicted RBP17.76■□□□□ 0.43
SMARCA4-201ENST00000344626 C1orf228Q6PIY5 440 aa17.76■□□□□ 0.43
SMARCA4-201ENST00000344626 IFT20Q8IY31 132 aa17.76■□□□□ 0.43
SMARCA4-201ENST00000344626 BBS5Q8N3I7 341 aa17.76■□□□□ 0.43
SMARCA4-201ENST00000344626 MRPL4Q9BYD3 311 aaKnown RBP17.76■□□□□ 0.43
SMARCA4-201ENST00000344626 ALDH3A1P30838 453 aa17.76■□□□□ 0.43
SMARCA4-201ENST00000344626 STOX1Q6ZVD7 989 aa17.76■□□□□ 0.43
SMARCA4-201ENST00000344626 TAOK1Q7L7X3 1001 aa17.76■□□□□ 0.43
SMARCA4-201ENST00000344626 PROM2Q8N271 834 aa17.76■□□□□ 0.43
SMARCA4-201ENST00000344626 PCSK9Q8NBP7 692 aaKnown RBP17.76■□□□□ 0.43
SMARCA4-201ENST00000344626 GSDMBQ8TAX9 411 aa17.76■□□□□ 0.43
SMARCA4-201ENST00000344626 EIF2AK1Q9BQI3 630 aaKnown RBP17.76■□□□□ 0.43
SMARCA4-201ENST00000344626 GCNT4Q9P109 453 aa17.76■□□□□ 0.43
SMARCA4-201ENST00000344626 POTEFA5A3E0 1075 aa17.76■□□□□ 0.43
SMARCA4-201ENST00000344626 DYNC1I1O14576 645 aa17.76■□□□□ 0.43
SMARCA4-201ENST00000344626 FKTNO75072 461 aa17.76■□□□□ 0.43
SMARCA4-201ENST00000344626 RPS6KA5O75582 802 aa17.76■□□□□ 0.43
SMARCA4-201ENST00000344626 POTEIP0CG38 1075 aa17.76■□□□□ 0.43
SMARCA4-201ENST00000344626 ITIH3Q06033 890 aa17.76■□□□□ 0.43
SMARCA4-201ENST00000344626 POTEGQ6S5H5 508 aa17.76■□□□□ 0.43
SMARCA4-201ENST00000344626 POTEEQ6S8J3 1075 aa17.76■□□□□ 0.43
SMARCA4-201ENST00000344626 GPT2Q8TD30 523 aa17.76■□□□□ 0.43
SMARCA4-201ENST00000344626 POLR3FQ9H1D9 316 aaPredicted RBP17.76■□□□□ 0.43
SMARCA4-201ENST00000344626 JMJD4Q9H9V9 463 aa17.76■□□□□ 0.43
SMARCA4-201ENST00000344626 TBX3O15119 743 aa17.76■□□□□ 0.43
SMARCA4-201ENST00000344626 LAMC2Q13753 1193 aa17.76■□□□□ 0.43
SMARCA4-201ENST00000344626 LONRF2Q1L5Z9 754 aa17.76■□□□□ 0.43
SMARCA4-201ENST00000344626 ZNF667Q5HYK9 610 aa17.76■□□□□ 0.43
SMARCA4-201ENST00000344626 SMYD4Q8IYR2 804 aaPredicted RBP17.76■□□□□ 0.43
SMARCA4-201ENST00000344626 EFNA5P52803 228 aa17.76■□□□□ 0.43
SMARCA4-201ENST00000344626 SIX6OS1Q8N1H7 587 aa17.76■□□□□ 0.43
SMARCA4-201ENST00000344626 GRK7Q8WTQ7 553 aa17.76■□□□□ 0.43
SMARCA4-201ENST00000344626 ODF2LQ9ULJ1 636 aa17.76■□□□□ 0.43
SMARCA4-201ENST00000344626 SLC26A4O43511 780 aa17.75■□□□□ 0.43
SMARCA4-201ENST00000344626 PQBP1O60828 265 aaKnown RBP17.75■□□□□ 0.43
SMARCA4-201ENST00000344626 PDIA5Q14554 519 aa17.75■□□□□ 0.43
SMARCA4-201ENST00000344626 PPP2R5DQ14738 602 aa17.75■□□□□ 0.43
SMARCA4-201ENST00000344626 MYO1FO00160 1098 aa17.75■□□□□ 0.43
SMARCA4-201ENST00000344626 SEMA3FQ13275 785 aa17.75■□□□□ 0.43
SMARCA4-201ENST00000344626 RINT1Q6NUQ1 792 aa17.75■□□□□ 0.43
SMARCA4-201ENST00000344626 FBXO16Q8IX29 292 aaPredicted RBP17.75■□□□□ 0.43
SMARCA4-201ENST00000344626 ELMOD1Q8N336 334 aa17.75■□□□□ 0.43
SMARCA4-201ENST00000344626 XXYLT1Q8NBI6 393 aa17.75■□□□□ 0.43
SMARCA4-201ENST00000344626 UBLCP1Q8WVY7 318 aaPredicted RBP17.75■□□□□ 0.43
SMARCA4-201ENST00000344626 ZNF541Q9H0D2 1346 aa17.75■□□□□ 0.43
SMARCA4-201ENST00000344626 CROCCP2Q86T23 111 aa17.75■□□□□ 0.43
SMARCA4-201ENST00000344626 SFR1Q86XK3 245 aa17.75■□□□□ 0.43
SMARCA4-201ENST00000344626 ZFPM1Q8IX07 1006 aa17.75■□□□□ 0.43
SMARCA4-201ENST00000344626 ARFGAP2Q8N6H7 521 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms