RNA–Protein interactions for RNA: ENST00000344337.10

KPNA1-201, Transcript of karyopherin subunit alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA1, Length 6,830 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-201ENST00000344337 ATP5OP48047 213 aa8.42□□□□□ -1.06
KPNA1-201ENST00000344337 CDK8P49336 464 aa8.42□□□□□ -1.06
KPNA1-201ENST00000344337 CASP4P49662 377 aa8.42□□□□□ -1.06
KPNA1-201ENST00000344337 SIK1P57059 783 aa8.42□□□□□ -1.06
KPNA1-201ENST00000344337 ARMC3Q5W041 872 aa8.42□□□□□ -1.06
KPNA1-201ENST00000344337 CEP70Q8NHQ1 597 aa8.42□□□□□ -1.06
KPNA1-201ENST00000344337 SLC40A1Q9NP59 571 aa8.42□□□□□ -1.06
KPNA1-201ENST00000344337 FGFR1OP2Q9NVK5 253 aa8.42□□□□□ -1.06
KPNA1-201ENST00000344337 PDE2AO00408 941 aaPredicted RBP8.42□□□□□ -1.06
KPNA1-201ENST00000344337 MEFVO15553 781 aaPredicted RBP8.42□□□□□ -1.06
KPNA1-201ENST00000344337 FTLP02792 175 aaPredicted RBP8.42□□□□□ -1.06
KPNA1-201ENST00000344337 HERVK_113P62684 666 aa8.42□□□□□ -1.06
KPNA1-201ENST00000344337 PPP2R2AP63151 447 aa8.42□□□□□ -1.06
KPNA1-201ENST00000344337 Q3C1V9 767 aa8.42□□□□□ -1.06
KPNA1-201ENST00000344337 CERKLQ49MI3 558 aaPredicted RBP8.42□□□□□ -1.06
KPNA1-201ENST00000344337 RPUSD2Q8IZ73 545 aaKnown RBP8.42□□□□□ -1.06
KPNA1-201ENST00000344337 DHTKD1Q96HY7 919 aaPredicted RBP8.42□□□□□ -1.06
KPNA1-201ENST00000344337 SEC16BQ96JE7 1060 aa8.42□□□□□ -1.06
KPNA1-201ENST00000344337 INTS13Q9NVM9 706 aa8.42□□□□□ -1.06
KPNA1-201ENST00000344337 MYMKA6NI61 221 aa8.42□□□□□ -1.06
KPNA1-201ENST00000344337 BRAFP15056 766 aa8.42□□□□□ -1.06
KPNA1-201ENST00000344337 CASP2P42575 452 aa8.42□□□□□ -1.06
KPNA1-201ENST00000344337 DPYDQ12882 1025 aa8.42□□□□□ -1.06
KPNA1-201ENST00000344337 GRAMD1BQ3KR37 738 aa8.42□□□□□ -1.06
KPNA1-201ENST00000344337 NEK9Q8TD19 979 aa8.42□□□□□ -1.06
KPNA1-201ENST00000344337 KIFAP3Q92845 792 aa8.42□□□□□ -1.06
KPNA1-201ENST00000344337 MRPL46Q9H2W6 279 aaKnown RBP8.42□□□□□ -1.06
KPNA1-201ENST00000344337 SPATS2LQ9NUQ6 558 aaKnown RBP8.42□□□□□ -1.06
KPNA1-201ENST00000344337 ERBB3P21860 1342 aa8.41□□□□□ -1.06
KPNA1-201ENST00000344337 PRPF3O43395 683 aaKnown RBP8.41□□□□□ -1.06
KPNA1-201ENST00000344337 PPP1R37O75864 691 aa8.41□□□□□ -1.06
KPNA1-201ENST00000344337 BFSP1Q12934 665 aa8.41□□□□□ -1.06
KPNA1-201ENST00000344337 COASYQ13057 564 aa8.41□□□□□ -1.06
KPNA1-201ENST00000344337 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.41□□□□□ -1.06
KPNA1-201ENST00000344337 SLFN13Q68D06 897 aa8.41□□□□□ -1.06
KPNA1-201ENST00000344337 ZNF408Q9H9D4 720 aa8.41□□□□□ -1.06
KPNA1-201ENST00000344337 RCCD1A6NED2 376 aa8.41□□□□□ -1.06
KPNA1-201ENST00000344337 ITGA4P13612 1032 aa8.41□□□□□ -1.06
KPNA1-201ENST00000344337 HABP4Q5JVS0 413 aaKnown RBP8.41□□□□□ -1.06
KPNA1-201ENST00000344337 LCA5Q86VQ0 697 aa8.41□□□□□ -1.06
KPNA1-201ENST00000344337 ATG4AQ8WYN0 398 aa8.41□□□□□ -1.06
KPNA1-201ENST00000344337 PI4K2AQ9BTU6 479 aa8.41□□□□□ -1.06
KPNA1-201ENST00000344337 A0A087X0T9 212 aa8.41□□□□□ -1.06
KPNA1-201ENST00000344337 FAM228BP0C875 321 aa8.41□□□□□ -1.06
KPNA1-201ENST00000344337 MDH1P40925 334 aaKnown RBP8.41□□□□□ -1.06
KPNA1-201ENST00000344337 CORO7P57737 925 aa8.41□□□□□ -1.06
KPNA1-201ENST00000344337 KDSRQ06136 332 aa8.41□□□□□ -1.06
KPNA1-201ENST00000344337 CEP128Q6ZU80 1094 aa8.41□□□□□ -1.06
KPNA1-201ENST00000344337 MIER3Q7Z3K6 550 aa8.41□□□□□ -1.06
KPNA1-201ENST00000344337 C7orf31Q8N865 590 aa8.41□□□□□ -1.06
KPNA1-201ENST00000344337 GBP7Q8N8V2 638 aaPredicted RBP8.41□□□□□ -1.06
KPNA1-201ENST00000344337 ATP6V1G3Q96LB4 118 aa8.41□□□□□ -1.06
KPNA1-201ENST00000344337 TSNARE1Q96NA8 513 aa8.41□□□□□ -1.06
KPNA1-201ENST00000344337 NPHS2Q9NP85 383 aa8.41□□□□□ -1.06
KPNA1-201ENST00000344337 LAMC1P11047 1609 aa8.41□□□□□ -1.06
KPNA1-201ENST00000344337 RSPH10B2B2RC85 870 aa8.41□□□□□ -1.06
KPNA1-201ENST00000344337 CAND2O75155 1236 aa8.41□□□□□ -1.06
KPNA1-201ENST00000344337 RSPH10BP0C881 870 aa8.41□□□□□ -1.06
KPNA1-201ENST00000344337 UBTFL6P0CB48 400 aaPredicted RBP8.41□□□□□ -1.06
KPNA1-201ENST00000344337 DRAP1Q14919 205 aaPredicted RBP8.41□□□□□ -1.06
KPNA1-201ENST00000344337 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.41□□□□□ -1.06
KPNA1-201ENST00000344337 CASKIN2Q8WXE0 1202 aa8.41□□□□□ -1.06
KPNA1-201ENST00000344337 L2HGDHQ9H9P8 463 aa8.41□□□□□ -1.06
KPNA1-201ENST00000344337 GOLGA8CPA6NN73 597 aa8.41□□□□□ -1.06
KPNA1-201ENST00000344337 ZBBXA8MT70 800 aa8.41□□□□□ -1.06
KPNA1-201ENST00000344337 ATP2A2P16615 1042 aaKnown RBP8.41□□□□□ -1.06
KPNA1-201ENST00000344337 DESP17661 470 aa8.41□□□□□ -1.06
KPNA1-201ENST00000344337 TARSP26639 723 aaKnown RBP8.41□□□□□ -1.06
KPNA1-201ENST00000344337 ARHGAP4P98171 946 aa8.41□□□□□ -1.06
KPNA1-201ENST00000344337 DAB2IPQ5VWQ8 1189 aa8.41□□□□□ -1.06
KPNA1-201ENST00000344337 FBXO11Q86XK2 927 aa8.41□□□□□ -1.06
KPNA1-201ENST00000344337 NKX2-3Q8TAU0 364 aa8.41□□□□□ -1.06
KPNA1-201ENST00000344337 DDX27Q96GQ7 796 aaKnown RBP8.41□□□□□ -1.06
KPNA1-201ENST00000344337 TGS1Q96RS0 853 aaKnown RBP8.41□□□□□ -1.06
KPNA1-201ENST00000344337 NBPF3Q9H094 633 aa8.41□□□□□ -1.06
KPNA1-201ENST00000344337 RNF17Q9BXT8 1623 aaKnown RBP8.41□□□□□ -1.06
KPNA1-201ENST00000344337 HNRNPDLO14979 420 aaKnown RBP8.4□□□□□ -1.06
KPNA1-201ENST00000344337 SLC8A1P32418 973 aa8.4□□□□□ -1.06
KPNA1-201ENST00000344337 LIFRP42702 1097 aa8.4□□□□□ -1.06
KPNA1-201ENST00000344337 SLC29A2Q14542 456 aa8.4□□□□□ -1.06
KPNA1-201ENST00000344337 PTPAQ15257 358 aa8.4□□□□□ -1.06
KPNA1-201ENST00000344337 NBPF20Q3BBV1 942 aa8.4□□□□□ -1.06
KPNA1-201ENST00000344337 PRUNE1Q86TP1 453 aa8.4□□□□□ -1.06
KPNA1-201ENST00000344337 WDR66Q8TBY9 1149 aa8.4□□□□□ -1.06
KPNA1-201ENST00000344337 EPS8L3Q8TE67 593 aaKnown RBP8.4□□□□□ -1.06
KPNA1-201ENST00000344337 SCYL1Q96KG9 808 aa8.4□□□□□ -1.06
KPNA1-201ENST00000344337 TAF1DQ9H5J8 278 aaPredicted RBP8.4□□□□□ -1.06
KPNA1-201ENST00000344337 OSGEPQ9NPF4 335 aa8.4□□□□□ -1.06
KPNA1-201ENST00000344337 HEY1Q9Y5J3 304 aa8.4□□□□□ -1.06
KPNA1-201ENST00000344337 ZCCHC18P0CG32 403 aa8.4□□□□□ -1.06
KPNA1-201ENST00000344337 TROVE2P10155 538 aaKnown RBP eCLIP8.4□□□□□ -1.06
KPNA1-201ENST00000344337 MYBP10242 640 aa8.4□□□□□ -1.06
KPNA1-201ENST00000344337 PDE6CP51160 858 aa8.4□□□□□ -1.06
KPNA1-201ENST00000344337 PMS2P54278 862 aa8.4□□□□□ -1.06
KPNA1-201ENST00000344337 PDXDC1Q6P996 788 aa8.4□□□□□ -1.06
KPNA1-201ENST00000344337 KDELC2Q7Z4H8 507 aa8.4□□□□□ -1.06
KPNA1-201ENST00000344337 ZSWIM2Q8NEG5 633 aa8.4□□□□□ -1.06
KPNA1-201ENST00000344337 CXorf38Q8TB03 319 aa8.4□□□□□ -1.06
KPNA1-201ENST00000344337 RNF34Q969K3 372 aa8.4□□□□□ -1.06
KPNA1-201ENST00000344337 TSC22D3Q99576 134 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms