RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 BPIFB4P59827 614 aa11.76□□□□□ -0.53
RPL28-201ENST00000344063 PSMD6Q15008 389 aa11.76□□□□□ -0.53
RPL28-201ENST00000344063 NBPF9Q3BBW0 867 aa11.76□□□□□ -0.53
RPL28-201ENST00000344063 NAALADL2Q58DX5 795 aa11.76□□□□□ -0.53
RPL28-201ENST00000344063 RHOT2Q8IXI1 618 aa11.76□□□□□ -0.53
RPL28-201ENST00000344063 TXNDC16Q9P2K2 825 aa11.76□□□□□ -0.53
RPL28-201ENST00000344063 PI4KBQ9UBF8 816 aa11.76□□□□□ -0.53
RPL28-201ENST00000344063 AMACRQ9UHK6 382 aa11.76□□□□□ -0.53
RPL28-201ENST00000344063 PDS5AQ29RF7 1337 aaKnown RBP11.76□□□□□ -0.53
RPL28-201ENST00000344063 MEGF6O75095 1541 aa11.76□□□□□ -0.53
RPL28-201ENST00000344063 TROVE2P10155 538 aaKnown RBP eCLIP11.76□□□□□ -0.53
RPL28-201ENST00000344063 SLMAPQ14BN4 828 aa11.76□□□□□ -0.53
RPL28-201ENST00000344063 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.76□□□□□ -0.53
RPL28-201ENST00000344063 CYFIP2Q96F07 1278 aa11.76□□□□□ -0.53
RPL28-201ENST00000344063 ZNF577Q9BSK1 485 aa11.76□□□□□ -0.53
RPL28-201ENST00000344063 COA1Q9GZY4 146 aa11.76□□□□□ -0.53
RPL28-201ENST00000344063 ZNF18P17022 549 aa11.76□□□□□ -0.53
RPL28-201ENST00000344063 DR1Q01658 176 aa11.76□□□□□ -0.53
RPL28-201ENST00000344063 ZNF211Q13398 564 aaPredicted RBP11.76□□□□□ -0.53
RPL28-201ENST00000344063 SYDE2Q5VT97 1194 aa11.76□□□□□ -0.53
RPL28-201ENST00000344063 LRRC8CQ8TDW0 803 aa11.76□□□□□ -0.53
RPL28-201ENST00000344063 ACCSQ96QU6 501 aa11.76□□□□□ -0.53
RPL28-201ENST00000344063 TMEM260Q9NX78 707 aa11.76□□□□□ -0.53
RPL28-201ENST00000344063 CD44P16070 742 aaKnown RBP11.76□□□□□ -0.53
RPL28-201ENST00000344063 CFAP157Q5JU67 520 aa11.76□□□□□ -0.53
RPL28-201ENST00000344063 ZNF653Q96CK0 615 aa11.76□□□□□ -0.53
RPL28-201ENST00000344063 CHMP6Q96FZ7 201 aa11.76□□□□□ -0.53
RPL28-201ENST00000344063 TAF1DQ9H5J8 278 aaPredicted RBP11.76□□□□□ -0.53
RPL28-201ENST00000344063 MYO5BQ9ULV0 1848 aa11.76□□□□□ -0.53
RPL28-201ENST00000344063 PFDN1O60925 122 aa11.75□□□□□ -0.53
RPL28-201ENST00000344063 TMED2Q15363 201 aa11.75□□□□□ -0.53
RPL28-201ENST00000344063 PHLDB3Q6NSJ2 640 aa11.75□□□□□ -0.53
RPL28-201ENST00000344063 LARGE2Q8N3Y3 721 aa11.75□□□□□ -0.53
RPL28-201ENST00000344063 KIF2BQ8N4N8 673 aa11.75□□□□□ -0.53
RPL28-201ENST00000344063 TRIM11Q96F44 468 aa11.75□□□□□ -0.53
RPL28-201ENST00000344063 E9PMD0 336 aa11.75□□□□□ -0.53
RPL28-201ENST00000344063 MSH2P43246 934 aa11.75□□□□□ -0.53
RPL28-201ENST00000344063 NSFP46459 744 aaKnown RBP11.75□□□□□ -0.53
RPL28-201ENST00000344063 PTK2Q05397 1052 aa11.75□□□□□ -0.53
RPL28-201ENST00000344063 TBC1D9BQ66K14 1250 aa11.75□□□□□ -0.53
RPL28-201ENST00000344063 NAIF1Q69YI7 327 aaPredicted RBP11.75□□□□□ -0.53
RPL28-201ENST00000344063 FOXP4Q8IVH2 680 aaPredicted RBP11.75□□□□□ -0.53
RPL28-201ENST00000344063 CDAN1Q8IWY9 1227 aa11.75□□□□□ -0.53
RPL28-201ENST00000344063 ARHGAP24Q8N264 748 aa11.75□□□□□ -0.53
RPL28-201ENST00000344063 FAM20AQ96MK3 541 aa11.75□□□□□ -0.53
RPL28-201ENST00000344063 LACRTQ9GZZ8 138 aa11.75□□□□□ -0.53
RPL28-201ENST00000344063 GOLPH3Q9H4A6 298 aa11.75□□□□□ -0.53
RPL28-201ENST00000344063 RAB20Q9NX57 234 aa11.75□□□□□ -0.53
RPL28-201ENST00000344063 A0A1W2PQJ5 194 aa11.75□□□□□ -0.53
RPL28-201ENST00000344063 TULP2O00295 520 aa11.75□□□□□ -0.53
RPL28-201ENST00000344063 CAMTA2O94983 1202 aa11.75□□□□□ -0.53
RPL28-201ENST00000344063 TDP2O95551 362 aa11.75□□□□□ -0.53
RPL28-201ENST00000344063 PLEKP08567 350 aaPredicted RBP11.75□□□□□ -0.53
RPL28-201ENST00000344063 PDHBP11177 359 aa11.75□□□□□ -0.53
RPL28-201ENST00000344063 ALAS1P13196 640 aa11.75□□□□□ -0.53
RPL28-201ENST00000344063 STK4Q13043 487 aa11.75□□□□□ -0.53
RPL28-201ENST00000344063 DMP1Q13316 513 aaPredicted RBP11.75□□□□□ -0.53
RPL28-201ENST00000344063 ALCAMQ13740 583 aa11.75□□□□□ -0.53
RPL28-201ENST00000344063 RCN2Q14257 317 aa11.75□□□□□ -0.53
RPL28-201ENST00000344063 NLGN1Q8N2Q7 840 aa11.75□□□□□ -0.53
RPL28-201ENST00000344063 DCAF4Q8WV16 495 aa11.75□□□□□ -0.53
RPL28-201ENST00000344063 SEC16BQ96JE7 1060 aa11.75□□□□□ -0.53
RPL28-201ENST00000344063 FAM81BQ96LP2 452 aa11.75□□□□□ -0.53
RPL28-201ENST00000344063 OSBPL1AQ9BXW6 950 aa11.75□□□□□ -0.53
RPL28-201ENST00000344063 IRAK4Q9NWZ3 460 aa11.75□□□□□ -0.53
RPL28-201ENST00000344063 MIF4GDA9UHW6 222 aaKnown RBP11.75□□□□□ -0.53
RPL28-201ENST00000344063 PPIP5K2O43314 1243 aa11.75□□□□□ -0.53
RPL28-201ENST00000344063 ECEL1O95672 775 aa11.75□□□□□ -0.53
RPL28-201ENST00000344063 CD19P15391 556 aa11.75□□□□□ -0.53
RPL28-201ENST00000344063 LMNB2Q03252 620 aa11.75□□□□□ -0.53
RPL28-201ENST00000344063 PDE1CQ14123 709 aaPredicted RBP11.75□□□□□ -0.53
RPL28-201ENST00000344063 LGSNQ5TDP6 509 aa11.75□□□□□ -0.53
RPL28-201ENST00000344063 SFR1Q86XK3 245 aa11.75□□□□□ -0.53
RPL28-201ENST00000344063 MDM1Q8TC05 714 aa11.75□□□□□ -0.53
RPL28-201ENST00000344063 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.75□□□□□ -0.53
RPL28-201ENST00000344063 VCX3BQ9H321 246 aa11.75□□□□□ -0.53
RPL28-201ENST00000344063 ZNF335Q9H4Z2 1342 aaPredicted RBP11.74□□□□□ -0.53
RPL28-201ENST00000344063 SART1O43290 800 aaKnown RBP11.74□□□□□ -0.53
RPL28-201ENST00000344063 NR3C1P04150 777 aa11.74□□□□□ -0.53
RPL28-201ENST00000344063 LIG4P49917 911 aa11.74□□□□□ -0.53
RPL28-201ENST00000344063 MXI1P50539 228 aa11.74□□□□□ -0.53
RPL28-201ENST00000344063 PTGISQ16647 500 aa11.74□□□□□ -0.53
RPL28-201ENST00000344063 KNOP1Q1ED39 458 aaKnown RBP11.74□□□□□ -0.53
RPL28-201ENST00000344063 CDKAL1Q5VV42 579 aa11.74□□□□□ -0.53
RPL28-201ENST00000344063 PPP1R21Q6ZMI0 780 aa11.74□□□□□ -0.53
RPL28-201ENST00000344063 SDCCAG8Q86SQ7 713 aaPredicted RBP11.74□□□□□ -0.53
RPL28-201ENST00000344063 PDCD7Q8N8D1 485 aaKnown RBP11.74□□□□□ -0.53
RPL28-201ENST00000344063 ECT2Q9H8V3 914 aa11.74□□□□□ -0.53
RPL28-201ENST00000344063 SCOCQ9UIL1 159 aa11.74□□□□□ -0.53
RPL28-201ENST00000344063 RICTORQ6R327 1708 aa11.74□□□□□ -0.53
RPL28-201ENST00000344063 DLATP10515 647 aaKnown RBP11.74□□□□□ -0.53
RPL28-201ENST00000344063 MKRN4PQ13434 485 aaPredicted RBP11.74□□□□□ -0.53
RPL28-201ENST00000344063 CYB5D1Q6P9G0 228 aa11.74□□□□□ -0.53
RPL28-201ENST00000344063 PHLDB2Q86SQ0 1253 aa11.74□□□□□ -0.53
RPL28-201ENST00000344063 CCDC89Q8N998 374 aa11.74□□□□□ -0.53
RPL28-201ENST00000344063 DEPTORQ8TB45 409 aa11.74□□□□□ -0.53
RPL28-201ENST00000344063 ERGIC2Q96RQ1 377 aa11.74□□□□□ -0.53
RPL28-201ENST00000344063 PICK1Q9NRD5 415 aa11.74□□□□□ -0.53
RPL28-201ENST00000344063 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.74□□□□□ -0.53
RPL28-201ENST00000344063 POTEB3A0JP26 581 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms