RNA–Protein interactions for RNA: ENST00000343958.8

FGD6-201, Transcript of FYVE, RhoGEF and PH domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FGD6, Length 9,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD6-201ENST00000343958 NCOA3Q9Y6Q9 1424 aa9.36□□□□□ -0.91
FGD6-201ENST00000343958 TLR3O15455 904 aaKnown RBP9.36□□□□□ -0.91
FGD6-201ENST00000343958 RWDD2BP57060 319 aa9.36□□□□□ -0.91
FGD6-201ENST00000343958 DARS2Q6PI48 645 aaKnown RBP9.36□□□□□ -0.91
FGD6-201ENST00000343958 RIOK1Q9BRS2 568 aaKnown RBP9.36□□□□□ -0.91
FGD6-201ENST00000343958 IRX4P78413 519 aa9.36□□□□□ -0.91
FGD6-201ENST00000343958 IL9RQ01113 521 aa9.36□□□□□ -0.91
FGD6-201ENST00000343958 DRAP1Q14919 205 aaPredicted RBP9.36□□□□□ -0.91
FGD6-201ENST00000343958 HSPH1Q92598 858 aa9.36□□□□□ -0.91
FGD6-201ENST00000343958 MS4A14Q96JA4 679 aa9.36□□□□□ -0.91
FGD6-201ENST00000343958 ELAC2Q9BQ52 826 aaKnown RBP9.36□□□□□ -0.91
FGD6-201ENST00000343958 HDLBPQ00341 1268 aaKnown RBP9.36□□□□□ -0.91
FGD6-201ENST00000343958 PPP4R3CPQ6ZMV5 832 aa9.36□□□□□ -0.91
FGD6-201ENST00000343958 SPATA24Q86W54 205 aa9.36□□□□□ -0.91
FGD6-201ENST00000343958 SPATS2Q86XZ4 545 aaKnown RBP9.36□□□□□ -0.91
FGD6-201ENST00000343958 SAAL1Q96ER3 474 aa9.36□□□□□ -0.91
FGD6-201ENST00000343958 PPP2R5AQ15172 486 aa9.35□□□□□ -0.91
FGD6-201ENST00000343958 GLYCTKQ8IVS8 523 aa9.35□□□□□ -0.91
FGD6-201ENST00000343958 C7orf31Q8N865 590 aa9.35□□□□□ -0.91
FGD6-201ENST00000343958 TCP11Q8WWU5 503 aa9.35□□□□□ -0.91
FGD6-201ENST00000343958 RGL1Q9NZL6 768 aa9.35□□□□□ -0.91
FGD6-201ENST00000343958 QRICH2Q9H0J4 1663 aa9.35□□□□□ -0.91
FGD6-201ENST00000343958 A0A087WUV0 522 aaPredicted RBP9.35□□□□□ -0.91
FGD6-201ENST00000343958 STXBP3O00186 592 aa9.35□□□□□ -0.91
FGD6-201ENST00000343958 ACSL3O95573 720 aa9.35□□□□□ -0.91
FGD6-201ENST00000343958 PLS3P13797 630 aa9.35□□□□□ -0.91
FGD6-201ENST00000343958 MUM1Q2TAK8 710 aa9.35□□□□□ -0.91
FGD6-201ENST00000343958 RAB3IPQ96QF0 476 aaPredicted RBP9.35□□□□□ -0.91
FGD6-201ENST00000343958 EIF2AK1Q9BQI3 630 aaKnown RBP9.35□□□□□ -0.91
FGD6-201ENST00000343958 G3BP2Q9UN86 482 aaKnown RBP9.35□□□□□ -0.91
FGD6-201ENST00000343958 PPRC1Q5VV67 1664 aaKnown RBP9.35□□□□□ -0.91
FGD6-201ENST00000343958 MAP2K2P36507 400 aa9.35□□□□□ -0.91
FGD6-201ENST00000343958 ARHGAP24Q8N264 748 aa9.35□□□□□ -0.91
FGD6-201ENST00000343958 CFAP61Q8NHU2 1237 aa9.35□□□□□ -0.91
FGD6-201ENST00000343958 KCNB2Q92953 911 aa9.35□□□□□ -0.91
FGD6-201ENST00000343958 CDC42BPBQ9Y5S2 1711 aa9.35□□□□□ -0.91
FGD6-201ENST00000343958 A6NJR5 290 aa9.35□□□□□ -0.91
FGD6-201ENST00000343958 CD44P16070 742 aaKnown RBP9.35□□□□□ -0.91
FGD6-201ENST00000343958 STK4Q13043 487 aa9.35□□□□□ -0.91
FGD6-201ENST00000343958 NR1I3Q14994 352 aa9.35□□□□□ -0.91
FGD6-201ENST00000343958 RINT1Q6NUQ1 792 aa9.35□□□□□ -0.91
FGD6-201ENST00000343958 TBC1D16Q8TBP0 767 aa9.35□□□□□ -0.91
FGD6-201ENST00000343958 WHAMMQ8TF30 809 aa9.35□□□□□ -0.91
FGD6-201ENST00000343958 TRIM11Q96F44 468 aa9.35□□□□□ -0.91
FGD6-201ENST00000343958 MYMKA6NI61 221 aa9.35□□□□□ -0.91
FGD6-201ENST00000343958 INHBAP08476 426 aa9.35□□□□□ -0.91
FGD6-201ENST00000343958 RCN2Q14257 317 aa9.35□□□□□ -0.91
FGD6-201ENST00000343958 LMBRD2Q68DH5 695 aaPredicted RBP9.35□□□□□ -0.91
FGD6-201ENST00000343958 PDXDC2PQ6P474 469 aa9.35□□□□□ -0.91
FGD6-201ENST00000343958 CEP170BQ9Y4F5 1589 aaPredicted RBP9.35□□□□□ -0.91
FGD6-201ENST00000343958 NEXMIFQ5QGS0 1516 aa9.35□□□□□ -0.91
FGD6-201ENST00000343958 PXDNLA1KZ92 1463 aa9.35□□□□□ -0.91
FGD6-201ENST00000343958 CNTNAP5Q8WYK1 1306 aa9.35□□□□□ -0.91
FGD6-201ENST00000343958 SUN1O94901 812 aa9.35□□□□□ -0.91
FGD6-201ENST00000343958 RASA1P20936 1047 aa9.35□□□□□ -0.91
FGD6-201ENST00000343958 SARNPP82979 210 aaKnown RBP9.35□□□□□ -0.91
FGD6-201ENST00000343958 CCDC125Q86Z20 511 aa9.35□□□□□ -0.91
FGD6-201ENST00000343958 RNF25Q96BH1 459 aaPredicted RBP9.35□□□□□ -0.91
FGD6-201ENST00000343958 FAM149B1Q96BN6 582 aa9.35□□□□□ -0.91
FGD6-201ENST00000343958 HEXIM2Q96MH2 286 aaKnown RBP9.35□□□□□ -0.91
FGD6-201ENST00000343958 CALN1Q9BXU9 219 aa9.35□□□□□ -0.91
FGD6-201ENST00000343958 CROCC2H7BZ55 1655 aa9.35□□□□□ -0.91
FGD6-201ENST00000343958 SLC12A2P55011 1212 aa9.34□□□□□ -0.91
FGD6-201ENST00000343958 MTMR1Q13613 665 aa9.34□□□□□ -0.91
FGD6-201ENST00000343958 PPP1R18Q6NYC8 613 aa9.34□□□□□ -0.91
FGD6-201ENST00000343958 C11orf70Q9BRQ4 267 aa9.34□□□□□ -0.91
FGD6-201ENST00000343958 ZNF277Q9NRM2 450 aaPredicted RBP9.34□□□□□ -0.91
FGD6-201ENST00000343958 TADA3O75528 432 aa9.34□□□□□ -0.91
FGD6-201ENST00000343958 MSH2P43246 934 aa9.34□□□□□ -0.91
FGD6-201ENST00000343958 CDO1Q16878 200 aa9.34□□□□□ -0.91
FGD6-201ENST00000343958 ADD3Q9UEY8 706 aaKnown RBP9.34□□□□□ -0.91
FGD6-201ENST00000343958 SH2D3AQ9BRG2 576 aa9.34□□□□□ -0.91
FGD6-201ENST00000343958 SAYSD1Q9NPB0 183 aa9.34□□□□□ -0.91
FGD6-201ENST00000343958 AFF2P51816 1311 aa9.34□□□□□ -0.91
FGD6-201ENST00000343958 PPP1R3GB7ZBB8 358 aa9.34□□□□□ -0.91
FGD6-201ENST00000343958 HIP1RO75146 1068 aa9.34□□□□□ -0.91
FGD6-201ENST00000343958 RASSF2P50749 326 aa9.34□□□□□ -0.91
FGD6-201ENST00000343958 GUF1Q8N442 669 aaKnown RBP9.34□□□□□ -0.91
FGD6-201ENST00000343958 NSMCE1Q8WV22 266 aa9.34□□□□□ -0.91
FGD6-201ENST00000343958 A0A1W2PQC6 194 aa9.34□□□□□ -0.91
FGD6-201ENST00000343958 MYBP10242 640 aa9.34□□□□□ -0.91
FGD6-201ENST00000343958 Q3C1V9 767 aa9.34□□□□□ -0.91
FGD6-201ENST00000343958 TBC1D1Q86TI0 1168 aaPredicted RBP9.34□□□□□ -0.91
FGD6-201ENST00000343958 EFCAB13Q8IY85 973 aa9.34□□□□□ -0.91
FGD6-201ENST00000343958 SRGNP10124 158 aa9.34□□□□□ -0.91
FGD6-201ENST00000343958 SF3B3Q15393 1217 aaKnown RBP9.34□□□□□ -0.91
FGD6-201ENST00000343958 SWSAP1Q6NVH7 229 aa9.34□□□□□ -0.91
FGD6-201ENST00000343958 KCTD6Q8NC69 237 aa9.34□□□□□ -0.91
FGD6-201ENST00000343958 CCNYQ8ND76 341 aa9.34□□□□□ -0.91
FGD6-201ENST00000343958 MLXIPLQ9NP71 852 aa9.34□□□□□ -0.91
FGD6-201ENST00000343958 PFDN4Q9NQP4 134 aa9.34□□□□□ -0.91
FGD6-201ENST00000343958 GPC5P78333 572 aa9.34□□□□□ -0.91
FGD6-201ENST00000343958 SBK1Q52WX2 424 aa9.34□□□□□ -0.91
FGD6-201ENST00000343958 EHD2Q9NZN4 543 aa9.34□□□□□ -0.91
FGD6-201ENST00000343958 ANAPC7Q9UJX3 599 aa9.34□□□□□ -0.91
FGD6-201ENST00000343958 ZNF233A6NK53 670 aa9.34□□□□□ -0.92
FGD6-201ENST00000343958 VAMP7P51809 220 aa9.34□□□□□ -0.92
FGD6-201ENST00000343958 PTPAQ15257 358 aa9.34□□□□□ -0.92
FGD6-201ENST00000343958 ZNF710Q8N1W2 664 aa9.34□□□□□ -0.92
FGD6-201ENST00000343958 NACA2Q9H009 215 aa9.34□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms