RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 LINC01465Q8N7H1 131 aa8.24□□□□□ -1.09
ZNF540-202ENST00000343599 OR6J1Q8NGC5 347 aa8.24□□□□□ -1.09
ZNF540-202ENST00000343599 USP26Q9BXU7 913 aa8.24□□□□□ -1.09
ZNF540-202ENST00000343599 S1PR5Q9H228 398 aa8.24□□□□□ -1.09
ZNF540-202ENST00000343599 GABBR1Q9UBS5 961 aa8.24□□□□□ -1.09
ZNF540-202ENST00000343599 JAG2Q9Y219 1238 aa8.24□□□□□ -1.09
ZNF540-202ENST00000343599 DOCK5Q9H7D0 1870 aa8.24□□□□□ -1.09
ZNF540-202ENST00000343599 FOSP01100 380 aaPredicted RBP8.24□□□□□ -1.09
ZNF540-202ENST00000343599 RAB27AP51159 221 aa8.24□□□□□ -1.09
ZNF540-202ENST00000343599 PPARAQ07869 468 aa8.24□□□□□ -1.09
ZNF540-202ENST00000343599 KCNA1Q09470 495 aa8.24□□□□□ -1.09
ZNF540-202ENST00000343599 GNPTABQ3T906 1256 aa8.24□□□□□ -1.09
ZNF540-202ENST00000343599 IFNL3Q8IZI9 196 aa8.24□□□□□ -1.09
ZNF540-202ENST00000343599 DHX38Q92620 1227 aaKnown RBP8.24□□□□□ -1.09
ZNF540-202ENST00000343599 NAP1L4Q99733 375 aaKnown RBP8.24□□□□□ -1.09
ZNF540-202ENST00000343599 CHRDQ9H2X0 955 aa8.24□□□□□ -1.09
ZNF540-202ENST00000343599 CCDC163A0A0D9SF12 145 aa8.23□□□□□ -1.09
ZNF540-202ENST00000343599 ZRANB2O95218 330 aaKnown RBP eCLIP8.23□□□□□ -1.09
ZNF540-202ENST00000343599 IFIT2P09913 472 aaKnown RBP8.23□□□□□ -1.09
ZNF540-202ENST00000343599 RPS9P46781 194 aaKnown RBP8.23□□□□□ -1.09
ZNF540-202ENST00000343599 DSC3Q14574 896 aa8.23□□□□□ -1.09
ZNF540-202ENST00000343599 PPP2R5AQ15172 486 aa8.23□□□□□ -1.09
ZNF540-202ENST00000343599 Q7L0L9 218 aa8.23□□□□□ -1.09
ZNF540-202ENST00000343599 C11orf74Q86VG3 221 aa8.23□□□□□ -1.09
ZNF540-202ENST00000343599 TMEM192Q8IY95 271 aa8.23□□□□□ -1.09
ZNF540-202ENST00000343599 LSM14AQ8ND56 463 aaKnown RBP8.23□□□□□ -1.09
ZNF540-202ENST00000343599 GTF3C6Q969F1 213 aa8.23□□□□□ -1.09
ZNF540-202ENST00000343599 CEP295NLQ96MC4 621 aa8.23□□□□□ -1.09
ZNF540-202ENST00000343599 PAGR1Q9BTK6 254 aa8.23□□□□□ -1.09
ZNF540-202ENST00000343599 RGS18Q9NS28 235 aa8.23□□□□□ -1.09
ZNF540-202ENST00000343599 MIA3Q5JRA6 1907 aa8.23□□□□□ -1.09
ZNF540-202ENST00000343599 TNRC6BQ9UPQ9 1833 aaKnown RBP8.23□□□□□ -1.09
ZNF540-202ENST00000343599 ATP8B1O43520 1251 aa8.23□□□□□ -1.09
ZNF540-202ENST00000343599 RPS6KA5O75582 802 aa8.23□□□□□ -1.09
ZNF540-202ENST00000343599 DGKIO75912 1065 aa8.23□□□□□ -1.09
ZNF540-202ENST00000343599 IVLP07476 585 aa8.23□□□□□ -1.09
ZNF540-202ENST00000343599 CSF2RAP15509 400 aa8.23□□□□□ -1.09
ZNF540-202ENST00000343599 PKP1Q13835 747 aa8.23□□□□□ -1.09
ZNF540-202ENST00000343599 MFSD10Q14728 455 aa8.23□□□□□ -1.09
ZNF540-202ENST00000343599 GNASQ5JWF2 1037 aa8.23□□□□□ -1.09
ZNF540-202ENST00000343599 FAM83BQ5T0W9 1011 aa8.23□□□□□ -1.09
ZNF540-202ENST00000343599 DPH6Q7L8W6 267 aa8.23□□□□□ -1.09
ZNF540-202ENST00000343599 ANKRD35Q8N283 1001 aa8.23□□□□□ -1.09
ZNF540-202ENST00000343599 RTKNQ9BST9 563 aa8.23□□□□□ -1.09
ZNF540-202ENST00000343599 NFKBIZQ9BYH8 718 aa8.23□□□□□ -1.09
ZNF540-202ENST00000343599 WDR11Q9BZH6 1224 aa8.23□□□□□ -1.09
ZNF540-202ENST00000343599 WNT16Q9UBV4 365 aa8.23□□□□□ -1.09
ZNF540-202ENST00000343599 CTDP1Q9Y5B0 961 aaPredicted RBP8.23□□□□□ -1.09
ZNF540-202ENST00000343599 SURF6O75683 361 aaKnown RBP8.23□□□□□ -1.09
ZNF540-202ENST00000343599 DYNLL1P63167 89 aaKnown RBP8.23□□□□□ -1.09
ZNF540-202ENST00000343599 AP3B2Q13367 1082 aa8.23□□□□□ -1.09
ZNF540-202ENST00000343599 GRM4Q14833 912 aa8.23□□□□□ -1.09
ZNF540-202ENST00000343599 RNF168Q8IYW5 571 aaPredicted RBP8.23□□□□□ -1.09
ZNF540-202ENST00000343599 OXER1Q8TDS5 423 aa8.23□□□□□ -1.09
ZNF540-202ENST00000343599 FAM167AQ96KS9 214 aa8.23□□□□□ -1.09
ZNF540-202ENST00000343599 ZSCAN16Q9H4T2 348 aaPredicted RBP8.23□□□□□ -1.09
ZNF540-202ENST00000343599 MRVI1Q9Y6F6 885 aa8.23□□□□□ -1.09
ZNF540-202ENST00000343599 FAM221BA6H8Z2 402 aa8.22□□□□□ -1.09
ZNF540-202ENST00000343599 TMEM221A6NGB7 291 aa8.22□□□□□ -1.09
ZNF540-202ENST00000343599 M0R296 226 aa8.22□□□□□ -1.09
ZNF540-202ENST00000343599 ELF2Q15723 593 aa8.22□□□□□ -1.09
ZNF540-202ENST00000343599 DNAJC14Q6Y2X3 702 aaPredicted RBP8.22□□□□□ -1.09
ZNF540-202ENST00000343599 NLRX1Q86UT6 975 aa8.22□□□□□ -1.09
ZNF540-202ENST00000343599 FBXO11Q86XK2 927 aa8.22□□□□□ -1.09
ZNF540-202ENST00000343599 EXOC4Q96A65 974 aa8.22□□□□□ -1.09
ZNF540-202ENST00000343599 FNIP2Q9P278 1114 aa8.22□□□□□ -1.09
ZNF540-202ENST00000343599 KCNH3Q9ULD8 1083 aa8.22□□□□□ -1.09
ZNF540-202ENST00000343599 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.22□□□□□ -1.09
ZNF540-202ENST00000343599 SLC4A4Q9Y6R1 1079 aa8.22□□□□□ -1.09
ZNF540-202ENST00000343599 PFKLP17858 780 aa8.22□□□□□ -1.09
ZNF540-202ENST00000343599 CORO7P57737 925 aa8.22□□□□□ -1.09
ZNF540-202ENST00000343599 PRKCQQ04759 706 aa8.22□□□□□ -1.09
ZNF540-202ENST00000343599 RNF207Q6ZRF8 634 aa8.22□□□□□ -1.09
ZNF540-202ENST00000343599 REXO1L1PQ8IX06 675 aa8.22□□□□□ -1.09
ZNF540-202ENST00000343599 TMEM57Q8N5G2 664 aa8.22□□□□□ -1.09
ZNF540-202ENST00000343599 E2F7Q96AV8 911 aa8.22□□□□□ -1.09
ZNF540-202ENST00000343599 C16orf45Q96MC5 204 aaPredicted RBP8.22□□□□□ -1.09
ZNF540-202ENST00000343599 MBOAT7Q96N66 472 aa8.22□□□□□ -1.09
ZNF540-202ENST00000343599 C16orf70Q9BSU1 422 aa8.22□□□□□ -1.09
ZNF540-202ENST00000343599 PRKD2Q9BZL6 878 aa8.22□□□□□ -1.09
ZNF540-202ENST00000343599 GPHNQ9NQX3 736 aaPredicted RBP8.22□□□□□ -1.09
ZNF540-202ENST00000343599 PXMP2Q9NR77 195 aa8.22□□□□□ -1.09
ZNF540-202ENST00000343599 C17orf102A2RUQ5 167 aa8.21□□□□□ -1.09
ZNF540-202ENST00000343599 PALM3A6NDB9 673 aaPredicted RBP8.21□□□□□ -1.09
ZNF540-202ENST00000343599 EIF3CLB5ME19 914 aaKnown RBP8.21□□□□□ -1.09
ZNF540-202ENST00000343599 MBD4O95243 580 aa8.21□□□□□ -1.09
ZNF540-202ENST00000343599 AXLP30530 894 aa8.21□□□□□ -1.09
ZNF540-202ENST00000343599 PI4K2BQ8TCG2 481 aa8.21□□□□□ -1.09
ZNF540-202ENST00000343599 FAXDC2Q96IV6 333 aa8.21□□□□□ -1.09
ZNF540-202ENST00000343599 PCMTD1Q96MG8 357 aaPredicted RBP8.21□□□□□ -1.09
ZNF540-202ENST00000343599 EIF3CQ99613 913 aaKnown RBP8.21□□□□□ -1.09
ZNF540-202ENST00000343599 HERC2P3Q9BVR0 1158 aa8.21□□□□□ -1.09
ZNF540-202ENST00000343599 H0YHG0 523 aa8.21□□□□□ -1.1
ZNF540-202ENST00000343599 MPHOSPH10O00566 681 aaKnown RBP8.21□□□□□ -1.1
ZNF540-202ENST00000343599 SGSM2O43147 1006 aa8.21□□□□□ -1.1
ZNF540-202ENST00000343599 PDHBP11177 359 aa8.21□□□□□ -1.1
ZNF540-202ENST00000343599 ACTN2P35609 894 aa8.21□□□□□ -1.1
ZNF540-202ENST00000343599 IRX1P78414 480 aaPredicted RBP8.21□□□□□ -1.1
ZNF540-202ENST00000343599 SARNPP82979 210 aaKnown RBP8.21□□□□□ -1.1
ZNF540-202ENST00000343599 CEP135Q66GS9 1140 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms