RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 ACTRT1Q8TDG2 376 aa8.83□□□□□ -1
ATG4A-201ENST00000343524 ASAP3Q8TDY4 903 aa8.83□□□□□ -1
ATG4A-201ENST00000343524 PIGOQ8TEQ8 1089 aa8.83□□□□□ -1
ATG4A-201ENST00000343524 GRAMD1AQ96CP6 724 aa8.83□□□□□ -1
ATG4A-201ENST00000343524 OLFM3Q96PB7 478 aa8.83□□□□□ -1
ATG4A-201ENST00000343524 TMEM237Q96Q45 408 aa8.83□□□□□ -1
ATG4A-201ENST00000343524 PSMB7Q99436 277 aa8.83□□□□□ -1
ATG4A-201ENST00000343524 NAP1L3Q99457 506 aaPredicted RBP8.83□□□□□ -1
ATG4A-201ENST00000343524 MAGEF1Q9HAY2 307 aa8.83□□□□□ -1
ATG4A-201ENST00000343524 AGPAT5Q9NUQ2 364 aa8.83□□□□□ -1
ATG4A-201ENST00000343524 ABCF3Q9NUQ8 709 aa8.83□□□□□ -1
ATG4A-201ENST00000343524 IL1RAPL1Q9NZN1 696 aa8.83□□□□□ -1
ATG4A-201ENST00000343524 AIPL1Q9NZN9 384 aa8.83□□□□□ -1
ATG4A-201ENST00000343524 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.83□□□□□ -1
ATG4A-201ENST00000343524 COMMD3-BMI1R4GMX3 469 aa8.83□□□□□ -1
ATG4A-201ENST00000343524 AFDNP55196 1824 aaKnown RBP8.83□□□□□ -1
ATG4A-201ENST00000343524 HEG1Q9ULI3 1381 aa8.83□□□□□ -1
ATG4A-201ENST00000343524 BTNL10A8MVZ5 291 aa8.82□□□□□ -1
ATG4A-201ENST00000343524 PGRMC1O00264 195 aaKnown RBP8.82□□□□□ -1
ATG4A-201ENST00000343524 RGS16O15492 202 aaPredicted RBP8.82□□□□□ -1
ATG4A-201ENST00000343524 NCK2O43639 380 aa8.82□□□□□ -1
ATG4A-201ENST00000343524 FGFR1OPO95684 399 aaKnown RBP8.82□□□□□ -1
ATG4A-201ENST00000343524 CHGBP05060 677 aa8.82□□□□□ -1
ATG4A-201ENST00000343524 FAM163BP0C2L3 166 aa8.82□□□□□ -1
ATG4A-201ENST00000343524 KRT2P35908 639 aa8.82□□□□□ -1
ATG4A-201ENST00000343524 EIF4A3P38919 411 aaKnown RBP8.82□□□□□ -1
ATG4A-201ENST00000343524 IL15P40933 162 aaPredicted RBP8.82□□□□□ -1
ATG4A-201ENST00000343524 MTIF2P46199 727 aaKnown RBP8.82□□□□□ -1
ATG4A-201ENST00000343524 MAP7Q14244 749 aa8.82□□□□□ -1
ATG4A-201ENST00000343524 PABPC1LQ4VXU2 614 aaKnown RBP8.82□□□□□ -1
ATG4A-201ENST00000343524 C6orf118Q5T5N4 469 aa8.82□□□□□ -1
ATG4A-201ENST00000343524 ARMC3Q5W041 872 aa8.82□□□□□ -1
ATG4A-201ENST00000343524 DENND2CQ68D51 928 aa8.82□□□□□ -1
ATG4A-201ENST00000343524 PDXDC2PQ6P474 469 aa8.82□□□□□ -1
ATG4A-201ENST00000343524 TOM1L2Q6ZVM7 507 aa8.82□□□□□ -1
ATG4A-201ENST00000343524 C2CD5Q86YS7 1000 aa8.82□□□□□ -1
ATG4A-201ENST00000343524 IRF2BP1Q8IU81 584 aa8.82□□□□□ -1
ATG4A-201ENST00000343524 OR2W6PQ8NHA6 318 aa8.82□□□□□ -1
ATG4A-201ENST00000343524 PRCCQ92733 491 aaPredicted RBP8.82□□□□□ -1
ATG4A-201ENST00000343524 PTPRN2Q92932 1015 aa8.82□□□□□ -1
ATG4A-201ENST00000343524 CCDC97Q96F63 343 aaPredicted RBP8.82□□□□□ -1
ATG4A-201ENST00000343524 RPS6KC1Q96S38 1066 aa8.82□□□□□ -1
ATG4A-201ENST00000343524 NDNQ99608 321 aa8.82□□□□□ -1
ATG4A-201ENST00000343524 SYT15Q9BQS2 421 aa8.82□□□□□ -1
ATG4A-201ENST00000343524 CENPKQ9BS16 269 aa8.82□□□□□ -1
ATG4A-201ENST00000343524 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.82□□□□□ -1
ATG4A-201ENST00000343524 LRMDAQ9H2I8 198 aa8.82□□□□□ -1
ATG4A-201ENST00000343524 CNNM2Q9H8M5 875 aa8.82□□□□□ -1
ATG4A-201ENST00000343524 PCMTD2Q9NV79 361 aa8.82□□□□□ -1
ATG4A-201ENST00000343524 SMARCAL1Q9NZC9 954 aa8.82□□□□□ -1
ATG4A-201ENST00000343524 EHD2Q9NZN4 543 aa8.82□□□□□ -1
ATG4A-201ENST00000343524 DLGAP2Q9P1A6 1054 aa8.82□□□□□ -1
ATG4A-201ENST00000343524 ZNF232Q9UNY5 417 aa8.82□□□□□ -1
ATG4A-201ENST00000343524 WDR37Q9Y2I8 494 aa8.82□□□□□ -1
ATG4A-201ENST00000343524 UTP11Q9Y3A2 253 aaKnown RBP8.82□□□□□ -1
ATG4A-201ENST00000343524 ATP8B3O60423 1300 aa8.82□□□□□ -1
ATG4A-201ENST00000343524 A0A087X0B3 334 aa8.82□□□□□ -1
ATG4A-201ENST00000343524 A0A0G2JLW4 131 aa8.82□□□□□ -1
ATG4A-201ENST00000343524 NVLO15381 856 aaKnown RBP8.82□□□□□ -1
ATG4A-201ENST00000343524 UNC5CO95185 931 aa8.82□□□□□ -1
ATG4A-201ENST00000343524 PDHA1P08559 390 aa8.82□□□□□ -1
ATG4A-201ENST00000343524 VHLP40337 213 aa8.82□□□□□ -1
ATG4A-201ENST00000343524 STAT6P42226 847 aa8.82□□□□□ -1
ATG4A-201ENST00000343524 PRCPP42785 496 aa8.82□□□□□ -1
ATG4A-201ENST00000343524 TRAPPC10P48553 1259 aa8.82□□□□□ -1
ATG4A-201ENST00000343524 ACVR2BQ13705 512 aa8.82□□□□□ -1
ATG4A-201ENST00000343524 RTN1Q16799 776 aa8.82□□□□□ -1
ATG4A-201ENST00000343524 TMEM67Q5HYA8 995 aa8.82□□□□□ -1
ATG4A-201ENST00000343524 SPDYAQ5MJ70 313 aa8.82□□□□□ -1
ATG4A-201ENST00000343524 C10orf76Q5T2E6 689 aa8.82□□□□□ -1
ATG4A-201ENST00000343524 RNF43Q68DV7 783 aa8.82□□□□□ -1
ATG4A-201ENST00000343524 OR52E8Q6IFG1 317 aa8.82□□□□□ -1
ATG4A-201ENST00000343524 CSGALNACT2Q8N6G5 542 aa8.82□□□□□ -1
ATG4A-201ENST00000343524 KLHDC4Q8TBB5 520 aa8.82□□□□□ -1
ATG4A-201ENST00000343524 SEC14L1Q92503 715 aa8.82□□□□□ -1
ATG4A-201ENST00000343524 NCSTNQ92542 709 aa8.82□□□□□ -1
ATG4A-201ENST00000343524 SYN2Q92777 582 aaPredicted RBP8.82□□□□□ -1
ATG4A-201ENST00000343524 EPSTI1Q96J88 318 aa8.82□□□□□ -1
ATG4A-201ENST00000343524 FMO2Q99518 471 aa8.82□□□□□ -1
ATG4A-201ENST00000343524 TMEM109Q9BVC6 243 aa8.82□□□□□ -1
ATG4A-201ENST00000343524 NOC4LQ9BVI4 516 aaKnown RBP8.82□□□□□ -1
ATG4A-201ENST00000343524 ARHGAP20Q9P2F6 1191 aa8.82□□□□□ -1
ATG4A-201ENST00000343524 KLHL14Q9P2G3 628 aa8.82□□□□□ -1
ATG4A-201ENST00000343524 PNMA2Q9UL42 364 aa8.82□□□□□ -1
ATG4A-201ENST00000343524 G3BP2Q9UN86 482 aaKnown RBP8.82□□□□□ -1
ATG4A-201ENST00000343524 DAAM1Q9Y4D1 1078 aa8.82□□□□□ -1
ATG4A-201ENST00000343524 NDUFB9Q9Y6M9 179 aa8.82□□□□□ -1
ATG4A-201ENST00000343524 BACH1O14867 736 aa8.81□□□□□ -1
ATG4A-201ENST00000343524 TPBGLP0DKB5 382 aa8.81□□□□□ -1
ATG4A-201ENST00000343524 PDE6BP35913 854 aa8.81□□□□□ -1
ATG4A-201ENST00000343524 RFC5P40937 340 aa8.81□□□□□ -1
ATG4A-201ENST00000343524 DHX9Q08211 1270 aaKnown RBP8.81□□□□□ -1
ATG4A-201ENST00000343524 PABPC4Q13310 644 aaKnown RBP eCLIP8.81□□□□□ -1
ATG4A-201ENST00000343524 NAB2Q15742 525 aa8.81□□□□□ -1
ATG4A-201ENST00000343524 SLC9C1Q4G0N8 1177 aa8.81□□□□□ -1
ATG4A-201ENST00000343524 AKAP4Q5JQC9 854 aa8.81□□□□□ -1
ATG4A-201ENST00000343524 RBM26Q5T8P6 1007 aaKnown RBP8.81□□□□□ -1
ATG4A-201ENST00000343524 CEP128Q6ZU80 1094 aa8.81□□□□□ -1
ATG4A-201ENST00000343524 USP49Q70CQ1 688 aa8.81□□□□□ -1
ATG4A-201ENST00000343524 INTS8Q75QN2 995 aaKnown RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms