RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 ASTN1O14525 1302 aa20.47■□□□□ 0.87
HOXA9-201ENST00000343483 ZC2HC1CQ53FD0 456 aaPredicted RBP20.47■□□□□ 0.87
HOXA9-201ENST00000343483 ODR4Q5SWX8 454 aa20.47■□□□□ 0.87
HOXA9-201ENST00000343483 TREML2Q5T2D2 321 aa20.47■□□□□ 0.87
HOXA9-201ENST00000343483 XRRA1Q6P2D8 792 aa20.47■□□□□ 0.87
HOXA9-201ENST00000343483 PADI6Q6TGC4 694 aa20.47■□□□□ 0.87
HOXA9-201ENST00000343483 FAM178BQ8IXR5 827 aa20.47■□□□□ 0.87
HOXA9-201ENST00000343483 A1CFQ9NQ94 594 aaKnown RBP20.47■□□□□ 0.87
HOXA9-201ENST00000343483 CYP39A1Q9NYL5 469 aa20.47■□□□□ 0.87
HOXA9-201ENST00000343483 RLFQ13129 1914 aa20.47■□□□□ 0.87
HOXA9-201ENST00000343483 EIF3DO15371 548 aaKnown RBP eCLIP20.46■□□□□ 0.87
HOXA9-201ENST00000343483 HIP1RO75146 1068 aa20.46■□□□□ 0.87
HOXA9-201ENST00000343483 NR3C1P04150 777 aa20.46■□□□□ 0.87
HOXA9-201ENST00000343483 GUCY2CP25092 1073 aa20.46■□□□□ 0.87
HOXA9-201ENST00000343483 ZNF131P52739 623 aa20.46■□□□□ 0.87
HOXA9-201ENST00000343483 MAEAQ7L5Y9 396 aa20.46■□□□□ 0.87
HOXA9-201ENST00000343483 TRMT1LQ7Z2T5 733 aaKnown RBP20.46■□□□□ 0.87
HOXA9-201ENST00000343483 SEL1LQ9UBV2 794 aa20.46■□□□□ 0.87
HOXA9-201ENST00000343483 MYPNQ86TC9 1320 aa20.46■□□□□ 0.87
HOXA9-201ENST00000343483 NEK11Q8NG66 645 aa20.46■□□□□ 0.87
HOXA9-201ENST00000343483 CCDC43Q96MW1 224 aaKnown RBP20.46■□□□□ 0.87
HOXA9-201ENST00000343483 COL11A1P12107 1806 aaPredicted RBP20.46■□□□□ 0.87
HOXA9-201ENST00000343483 WDR64B1ANS9 1081 aa20.45■□□□□ 0.86
HOXA9-201ENST00000343483 CCNE2O96020 404 aa20.45■□□□□ 0.86
HOXA9-201ENST00000343483 RPL13P26373 211 aaKnown RBP20.45■□□□□ 0.86
HOXA9-201ENST00000343483 IREB2P48200 963 aaKnown RBP20.45■□□□□ 0.86
HOXA9-201ENST00000343483 KRT76Q01546 638 aa20.45■□□□□ 0.86
HOXA9-201ENST00000343483 UGCGQ16739 394 aa20.45■□□□□ 0.86
HOXA9-201ENST00000343483 NLRX1Q86UT6 975 aa20.45■□□□□ 0.86
HOXA9-201ENST00000343483 KSR1Q8IVT5 923 aa20.45■□□□□ 0.86
HOXA9-201ENST00000343483 ARMCX3Q9UH62 379 aaPredicted RBP20.45■□□□□ 0.86
HOXA9-201ENST00000343483 FAM184BQ9ULE4 1060 aa20.45■□□□□ 0.86
HOXA9-201ENST00000343483 CLIC2O15247 247 aa20.44■□□□□ 0.86
HOXA9-201ENST00000343483 YWHABP31946 246 aaKnown RBP20.44■□□□□ 0.86
HOXA9-201ENST00000343483 ARHGAP25P42331 645 aa20.44■□□□□ 0.86
HOXA9-201ENST00000343483 JAK3P52333 1124 aa20.44■□□□□ 0.86
HOXA9-201ENST00000343483 KCNMA1Q12791 1236 aa20.44■□□□□ 0.86
HOXA9-201ENST00000343483 STXBP4Q6ZWJ1 553 aa20.44■□□□□ 0.86
HOXA9-201ENST00000343483 ZNF720Q7Z2F6 126 aa20.44■□□□□ 0.86
HOXA9-201ENST00000343483 GPRASP2Q96D09 838 aa20.44■□□□□ 0.86
HOXA9-201ENST00000343483 FIZ1Q96SL8 496 aa20.44■□□□□ 0.86
HOXA9-201ENST00000343483 SH2D3AQ9BRG2 576 aa20.44■□□□□ 0.86
HOXA9-201ENST00000343483 CRACR2AQ9BSW2 395 aa20.44■□□□□ 0.86
HOXA9-201ENST00000343483 IKZF4Q9H2S9 585 aa20.44■□□□□ 0.86
HOXA9-201ENST00000343483 NHEJ1Q9H9Q4 299 aaPredicted RBP20.44■□□□□ 0.86
HOXA9-201ENST00000343483 ELP3Q9H9T3 547 aa20.44■□□□□ 0.86
HOXA9-201ENST00000343483 DBR1Q9UK59 544 aaKnown RBP20.44■□□□□ 0.86
HOXA9-201ENST00000343483 ZMYM2Q9UBW7 1377 aa20.44■□□□□ 0.86
HOXA9-201ENST00000343483 AKAP3O75969 853 aa20.44■□□□□ 0.86
HOXA9-201ENST00000343483 ABL1P00519 1130 aa20.44■□□□□ 0.86
HOXA9-201ENST00000343483 RARRES1P49788 294 aa20.44■□□□□ 0.86
HOXA9-201ENST00000343483 CLCN6P51797 869 aa20.44■□□□□ 0.86
HOXA9-201ENST00000343483 C1QTNF8P60827 252 aa20.44■□□□□ 0.86
HOXA9-201ENST00000343483 GADL1Q6ZQY3 521 aa20.44■□□□□ 0.86
HOXA9-201ENST00000343483 RRAGAQ7L523 313 aa20.44■□□□□ 0.86
HOXA9-201ENST00000343483 CACNA2D4Q7Z3S7 1137 aa20.44■□□□□ 0.86
HOXA9-201ENST00000343483 FRMD5Q7Z6J6 570 aa20.44■□□□□ 0.86
HOXA9-201ENST00000343483 SLC35F6Q8N357 371 aa20.44■□□□□ 0.86
HOXA9-201ENST00000343483 OTUD5Q96G74 571 aa20.44■□□□□ 0.86
HOXA9-201ENST00000343483 INPP4AQ96PE3 977 aaPredicted RBP20.44■□□□□ 0.86
HOXA9-201ENST00000343483 REXO2Q9Y3B8 237 aaKnown RBP20.44■□□□□ 0.86
HOXA9-201ENST00000343483 CTAGE9A4FU28 777 aa20.43■□□□□ 0.86
HOXA9-201ENST00000343483 TMEM150BA6NC51 233 aa20.43■□□□□ 0.86
HOXA9-201ENST00000343483 TGFB1I1O43294 461 aa20.43■□□□□ 0.86
HOXA9-201ENST00000343483 PEX10O60683 326 aa20.43■□□□□ 0.86
HOXA9-201ENST00000343483 USO1O60763 962 aaKnown RBP20.43■□□□□ 0.86
HOXA9-201ENST00000343483 SFNP31947 248 aa20.43■□□□□ 0.86
HOXA9-201ENST00000343483 CYLC1P35663 651 aaPredicted RBP20.43■□□□□ 0.86
HOXA9-201ENST00000343483 KCNH2Q12809 1159 aa20.43■□□□□ 0.86
HOXA9-201ENST00000343483 MAPK7Q13164 816 aa20.43■□□□□ 0.86
HOXA9-201ENST00000343483 UTP14CQ5TAP6 766 aaKnown RBP20.43■□□□□ 0.86
HOXA9-201ENST00000343483 PNMA8AQ86V59 439 aaPredicted RBP20.43■□□□□ 0.86
HOXA9-201ENST00000343483 DAW1Q8N136 415 aa20.43■□□□□ 0.86
HOXA9-201ENST00000343483 ARGLU1Q9NWB6 273 aaPredicted RBP20.43■□□□□ 0.86
HOXA9-201ENST00000343483 ZNF446Q9NWS9 450 aa20.43■□□□□ 0.86
HOXA9-201ENST00000343483 LRRC53A6NM62 1247 aa20.42■□□□□ 0.86
HOXA9-201ENST00000343483 LYPLA2O95372 231 aa20.42■□□□□ 0.86
HOXA9-201ENST00000343483 PSMC5P62195 406 aa20.42■□□□□ 0.86
HOXA9-201ENST00000343483 TEX35Q5T0J7 233 aa20.42■□□□□ 0.86
HOXA9-201ENST00000343483 USP50Q70EL3 339 aaPredicted RBP20.42■□□□□ 0.86
HOXA9-201ENST00000343483 GPIHBP1Q8IV16 184 aa20.42■□□□□ 0.86
HOXA9-201ENST00000343483 LSM14BQ9BX40 385 aaKnown RBP20.42■□□□□ 0.86
HOXA9-201ENST00000343483 MYO1AQ9UBC5 1043 aa20.42■□□□□ 0.86
HOXA9-201ENST00000343483 PLAGL2Q9UPG8 496 aa20.42■□□□□ 0.86
HOXA9-201ENST00000343483 IRF6O14896 467 aa20.42■□□□□ 0.86
HOXA9-201ENST00000343483 EPB41P11171 864 aaKnown RBP20.42■□□□□ 0.86
HOXA9-201ENST00000343483 XRCC5P13010 732 aaKnown RBP20.42■□□□□ 0.86
HOXA9-201ENST00000343483 CASP4P49662 377 aa20.42■□□□□ 0.86
HOXA9-201ENST00000343483 TTLL12Q14166 644 aaPredicted RBP20.42■□□□□ 0.86
HOXA9-201ENST00000343483 DCAF17Q5H9S7 520 aaPredicted RBP20.42■□□□□ 0.86
HOXA9-201ENST00000343483 MOB2Q70IA6 237 aa20.42■□□□□ 0.86
HOXA9-201ENST00000343483 RSRC2Q7L4I2 434 aaKnown RBP20.42■□□□□ 0.86
HOXA9-201ENST00000343483 SMAP1Q8IYB5 467 aaPredicted RBP20.42■□□□□ 0.86
HOXA9-201ENST00000343483 CCDC170Q8IYT3 715 aa20.42■□□□□ 0.86
HOXA9-201ENST00000343483 CLMNQ96JQ2 1002 aa20.42■□□□□ 0.86
HOXA9-201ENST00000343483 PCDHB13Q9Y5F0 798 aa20.42■□□□□ 0.86
HOXA9-201ENST00000343483 SLC16A3O15427 465 aaKnown RBP20.41■□□□□ 0.86
HOXA9-201ENST00000343483 MAFGO15525 162 aa20.41■□□□□ 0.86
HOXA9-201ENST00000343483 RGS20O76081 388 aa20.41■□□□□ 0.86
HOXA9-201ENST00000343483 IPO7O95373 1038 aaKnown RBP20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms