RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 LACRTQ9GZZ8 138 aa7.77□□□□□ -1.17
VCAN-202ENST00000342785 GPR75-ASB3A0A0A6YYF3 556 aa7.77□□□□□ -1.17
VCAN-202ENST00000342785 PRELPP51888 382 aa7.77□□□□□ -1.17
VCAN-202ENST00000342785 CLNS1AP54105 237 aaKnown RBP7.77□□□□□ -1.17
VCAN-202ENST00000342785 SNX16P57768 344 aa7.77□□□□□ -1.17
VCAN-202ENST00000342785 TRIP13Q15645 432 aaPredicted RBP7.77□□□□□ -1.17
VCAN-202ENST00000342785 CFAP157Q5JU67 520 aa7.77□□□□□ -1.17
VCAN-202ENST00000342785 TACO1Q9BSH4 297 aaKnown RBP7.77□□□□□ -1.17
VCAN-202ENST00000342785 SUN1O94901 812 aa7.77□□□□□ -1.17
VCAN-202ENST00000342785 TNNC2P02585 160 aa7.77□□□□□ -1.17
VCAN-202ENST00000342785 PIK3CAP42336 1068 aa7.77□□□□□ -1.17
VCAN-202ENST00000342785 SCYL2Q6P3W7 929 aa7.77□□□□□ -1.17
VCAN-202ENST00000342785 ARMC9Q7Z3E5 817 aa7.77□□□□□ -1.17
VCAN-202ENST00000342785 ZNF354CQ86Y25 554 aa7.77□□□□□ -1.17
VCAN-202ENST00000342785 SPATA31A1Q5TZJ5 1347 aa7.77□□□□□ -1.17
VCAN-202ENST00000342785 PALM3A6NDB9 673 aaPredicted RBP7.77□□□□□ -1.17
VCAN-202ENST00000342785 NMT1P30419 496 aaKnown RBP7.77□□□□□ -1.17
VCAN-202ENST00000342785 HSPA1LP34931 641 aa7.77□□□□□ -1.17
VCAN-202ENST00000342785 RASA3Q14644 834 aa7.77□□□□□ -1.17
VCAN-202ENST00000342785 CCDC14Q49A88 953 aa7.77□□□□□ -1.17
VCAN-202ENST00000342785 MTERF2Q49AM1 385 aa7.77□□□□□ -1.17
VCAN-202ENST00000342785 ZNF746Q6NUN9 644 aaPredicted RBP7.77□□□□□ -1.17
VCAN-202ENST00000342785 CASC4Q6P4E1 433 aa7.77□□□□□ -1.17
VCAN-202ENST00000342785 KBTBD4Q9NVX7 518 aa7.77□□□□□ -1.17
VCAN-202ENST00000342785 MYOM1P52179 1685 aa7.77□□□□□ -1.17
VCAN-202ENST00000342785 NDC80O14777 642 aa7.77□□□□□ -1.17
VCAN-202ENST00000342785 SART1O43290 800 aaKnown RBP7.77□□□□□ -1.17
VCAN-202ENST00000342785 TROVE2P10155 538 aaKnown RBP eCLIP7.77□□□□□ -1.17
VCAN-202ENST00000342785 MAP2K2P36507 400 aa7.77□□□□□ -1.17
VCAN-202ENST00000342785 PLA2G4AP47712 749 aa7.77□□□□□ -1.17
VCAN-202ENST00000342785 KLK7P49862 253 aa7.77□□□□□ -1.17
VCAN-202ENST00000342785 CDHR1Q96JP9 859 aa7.77□□□□□ -1.17
VCAN-202ENST00000342785 FUT8Q9BYC5 575 aa7.77□□□□□ -1.17
VCAN-202ENST00000342785 TRIM6Q9C030 488 aaPredicted RBP7.77□□□□□ -1.17
VCAN-202ENST00000342785 CNOT10Q9H9A5 744 aaKnown RBP7.77□□□□□ -1.17
VCAN-202ENST00000342785 DNAJC17Q9NVM6 304 aaKnown RBP7.77□□□□□ -1.17
VCAN-202ENST00000342785 SEL1LQ9UBV2 794 aa7.77□□□□□ -1.17
VCAN-202ENST00000342785 ANAPC5Q9UJX4 755 aa7.77□□□□□ -1.17
VCAN-202ENST00000342785 MAP2P11137 1827 aaKnown RBP7.76□□□□□ -1.17
VCAN-202ENST00000342785 GOLGA8SH3BPF8 625 aa7.76□□□□□ -1.17
VCAN-202ENST00000342785 IPO5O00410 1097 aaKnown RBP7.76□□□□□ -1.17
VCAN-202ENST00000342785 LMNB2Q03252 620 aa7.76□□□□□ -1.17
VCAN-202ENST00000342785 CEP55Q53EZ4 464 aa7.76□□□□□ -1.17
VCAN-202ENST00000342785 BSPRYQ5W0U4 402 aa7.76□□□□□ -1.17
VCAN-202ENST00000342785 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.76□□□□□ -1.17
VCAN-202ENST00000342785 ZNF341Q9BYN7 854 aa7.76□□□□□ -1.17
VCAN-202ENST00000342785 VIPAS39Q9H9C1 493 aa7.76□□□□□ -1.17
VCAN-202ENST00000342785 JMJD4Q9H9V9 463 aa7.76□□□□□ -1.17
VCAN-202ENST00000342785 SMARCAL1Q9NZC9 954 aa7.76□□□□□ -1.17
VCAN-202ENST00000342785 INO80B-WBP1J3KQ70 363 aa7.76□□□□□ -1.17
VCAN-202ENST00000342785 C21orf2O43822 256 aa7.76□□□□□ -1.17
VCAN-202ENST00000342785 EYA4O95677 639 aa7.76□□□□□ -1.17
VCAN-202ENST00000342785 NDUFB10O96000 172 aa7.76□□□□□ -1.17
VCAN-202ENST00000342785 ITIH3Q06033 890 aa7.76□□□□□ -1.17
VCAN-202ENST00000342785 TTI2Q6NXR4 508 aa7.76□□□□□ -1.17
VCAN-202ENST00000342785 BANK1Q8NDB2 785 aa7.76□□□□□ -1.17
VCAN-202ENST00000342785 TCP11Q8WWU5 503 aa7.76□□□□□ -1.17
VCAN-202ENST00000342785 EIF2AK1Q9BQI3 630 aaKnown RBP7.76□□□□□ -1.17
VCAN-202ENST00000342785 INO80BQ9C086 356 aaPredicted RBP7.76□□□□□ -1.17
VCAN-202ENST00000342785 NPHP3-ACAD11A0A0J9YXS1 232 aa7.76□□□□□ -1.17
VCAN-202ENST00000342785 ZNF233A6NK53 670 aa7.76□□□□□ -1.17
VCAN-202ENST00000342785 P4HA1P13674 534 aa7.76□□□□□ -1.17
VCAN-202ENST00000342785 UCHL3P15374 230 aa7.76□□□□□ -1.17
VCAN-202ENST00000342785 SARSP49591 514 aaKnown RBP7.76□□□□□ -1.17
VCAN-202ENST00000342785 YARSP54577 528 aaKnown RBP7.76□□□□□ -1.17
VCAN-202ENST00000342785 CCDC62Q6P9F0 684 aa7.76□□□□□ -1.17
VCAN-202ENST00000342785 FRMD5Q7Z6J6 570 aa7.76□□□□□ -1.17
VCAN-202ENST00000342785 HNRNPLLQ8WVV9 542 aaKnown RBP7.76□□□□□ -1.17
VCAN-202ENST00000342785 TAF1DQ9H5J8 278 aaPredicted RBP7.76□□□□□ -1.17
VCAN-202ENST00000342785 MRPL47Q9HD33 250 aaKnown RBP7.76□□□□□ -1.17
VCAN-202ENST00000342785 CNOT8Q9UFF9 292 aaKnown RBP7.76□□□□□ -1.17
VCAN-202ENST00000342785 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.76□□□□□ -1.17
VCAN-202ENST00000342785 CSADQ9Y600 493 aa7.76□□□□□ -1.17
VCAN-202ENST00000342785 FAM205AQ6ZU69 1335 aa7.76□□□□□ -1.17
VCAN-202ENST00000342785 DAPK3O43293 454 aa7.76□□□□□ -1.17
VCAN-202ENST00000342785 STAM2O75886 525 aa7.76□□□□□ -1.17
VCAN-202ENST00000342785 ACTN1P12814 892 aa7.76□□□□□ -1.17
VCAN-202ENST00000342785 SLC9A1P19634 815 aa7.76□□□□□ -1.17
VCAN-202ENST00000342785 GPC5P78333 572 aa7.76□□□□□ -1.17
VCAN-202ENST00000342785 EDRF1Q3B7T1 1238 aa7.76□□□□□ -1.17
VCAN-202ENST00000342785 RMDN3Q96TC7 470 aa7.76□□□□□ -1.17
VCAN-202ENST00000342785 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.76□□□□□ -1.17
VCAN-202ENST00000342785 AMACRQ9UHK6 382 aa7.76□□□□□ -1.17
VCAN-202ENST00000342785 SUGT1Q9Y2Z0 365 aa7.76□□□□□ -1.17
VCAN-202ENST00000342785 FHOD1Q9Y613 1164 aa7.76□□□□□ -1.17
VCAN-202ENST00000342785 LRRD1A4D1F6 860 aa7.76□□□□□ -1.17
VCAN-202ENST00000342785 I3L4J1 428 aa7.76□□□□□ -1.17
VCAN-202ENST00000342785 HIP1RO75146 1068 aa7.76□□□□□ -1.17
VCAN-202ENST00000342785 RASSF2P50749 326 aa7.76□□□□□ -1.17
VCAN-202ENST00000342785 HIBCHQ6NVY1 386 aaPredicted RBP7.76□□□□□ -1.17
VCAN-202ENST00000342785 TRIM65Q6PJ69 517 aa7.76□□□□□ -1.17
VCAN-202ENST00000342785 RFFLQ8WZ73 363 aa7.76□□□□□ -1.17
VCAN-202ENST00000342785 PNKPQ96T60 521 aa7.76□□□□□ -1.17
VCAN-202ENST00000342785 PPP1R12CQ9BZL4 782 aa7.76□□□□□ -1.17
VCAN-202ENST00000342785 TBK1Q9UHD2 729 aa7.76□□□□□ -1.17
VCAN-202ENST00000342785 GRID2IPA4D2P6 1211 aa7.75□□□□□ -1.17
VCAN-202ENST00000342785 K7ERI5 159 aa7.75□□□□□ -1.17
VCAN-202ENST00000342785 SLC16A4O15374 487 aa7.75□□□□□ -1.17
VCAN-202ENST00000342785 ACSL3O95573 720 aa7.75□□□□□ -1.17
VCAN-202ENST00000342785 SMARCA1P28370 1054 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms