RNA–Protein interactions for RNA: ENST00000341594.9

SYNE1-201, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNE1, Length 26,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-201ENST00000341594 CCND1P24385 295 aa3.82□□□□□ -1.8
SYNE1-201ENST00000341594 CHMP7Q8WUX9 453 aaPredicted RBP3.82□□□□□ -1.8
SYNE1-201ENST00000341594 PTPRKQ15262 1439 aa3.82□□□□□ -1.8
SYNE1-201ENST00000341594 POTEB3A0JP26 581 aa3.82□□□□□ -1.8
SYNE1-201ENST00000341594 CCDC169A6NNP5 214 aa3.82□□□□□ -1.8
SYNE1-201ENST00000341594 AKR1B15C9JRZ8 316 aaPredicted RBP3.82□□□□□ -1.8
SYNE1-201ENST00000341594 RASGRF1Q13972 1273 aa3.82□□□□□ -1.8
SYNE1-201ENST00000341594 POTEBQ6S5H4 581 aa3.82□□□□□ -1.8
SYNE1-201ENST00000341594 TNNC1P63316 161 aa3.82□□□□□ -1.8
SYNE1-201ENST00000341594 MFN1Q8IWA4 741 aa3.82□□□□□ -1.8
SYNE1-201ENST00000341594 MREGQ8N565 214 aa3.82□□□□□ -1.8
SYNE1-201ENST00000341594 PWWP2AQ96N64 755 aa3.82□□□□□ -1.8
SYNE1-201ENST00000341594 WDR24Q96S15 920 aa3.82□□□□□ -1.8
SYNE1-201ENST00000341594 KRT12Q99456 494 aa3.82□□□□□ -1.8
SYNE1-201ENST00000341594 STIM2Q9P246 746 aa3.82□□□□□ -1.8
SYNE1-201ENST00000341594 C2CD2LO14523 706 aa3.82□□□□□ -1.8
SYNE1-201ENST00000341594 FESP07332 822 aa3.82□□□□□ -1.8
SYNE1-201ENST00000341594 CCDC159P0C7I6 412 aa3.82□□□□□ -1.8
SYNE1-201ENST00000341594 TMEM126BQ8IUX1 230 aa3.82□□□□□ -1.8
SYNE1-201ENST00000341594 TRIM7Q9C029 511 aa3.82□□□□□ -1.8
SYNE1-201ENST00000341594 DENND2AQ9ULE3 1009 aa3.82□□□□□ -1.8
SYNE1-201ENST00000341594 CORO1CQ9ULV4 474 aaPredicted RBP3.82□□□□□ -1.8
SYNE1-201ENST00000341594 EEF2P13639 858 aaKnown RBP3.82□□□□□ -1.8
SYNE1-201ENST00000341594 COG7P83436 770 aa3.82□□□□□ -1.8
SYNE1-201ENST00000341594 MRC2Q9UBG0 1479 aa3.82□□□□□ -1.8
SYNE1-201ENST00000341594 PRPF6O94906 941 aaKnown RBP3.82□□□□□ -1.8
SYNE1-201ENST00000341594 ZWINTO95229 277 aa3.82□□□□□ -1.8
SYNE1-201ENST00000341594 LETM2Q2VYF4 491 aa3.82□□□□□ -1.8
SYNE1-201ENST00000341594 PRR16Q569H4 304 aa3.82□□□□□ -1.8
SYNE1-201ENST00000341594 PLSCR2Q9NRY7 297 aa3.82□□□□□ -1.8
SYNE1-201ENST00000341594 EVLQ9UI08 416 aaPredicted RBP3.82□□□□□ -1.8
SYNE1-201ENST00000341594 FCER2P06734 321 aa3.82□□□□□ -1.8
SYNE1-201ENST00000341594 SLC45A4Q5BKX6 768 aa3.82□□□□□ -1.8
SYNE1-201ENST00000341594 TTLL11Q8NHH1 800 aa3.82□□□□□ -1.8
SYNE1-201ENST00000341594 SH2D3AQ9BRG2 576 aa3.82□□□□□ -1.8
SYNE1-201ENST00000341594 ALKQ9UM73 1620 aa3.82□□□□□ -1.8
SYNE1-201ENST00000341594 PCNX2A6NKB5 2137 aa3.82□□□□□ -1.8
SYNE1-201ENST00000341594 FAM186AA6NE01 2351 aa3.82□□□□□ -1.8
SYNE1-201ENST00000341594 CAND2O75155 1236 aa3.82□□□□□ -1.8
SYNE1-201ENST00000341594 PIK3CAP42336 1068 aa3.82□□□□□ -1.8
SYNE1-201ENST00000341594 TUBA3CQ13748 450 aa3.82□□□□□ -1.8
SYNE1-201ENST00000341594 TYW1BQ6NUM6 668 aa3.82□□□□□ -1.8
SYNE1-201ENST00000341594 MIR1-1HGQ9H1L0 117 aa3.82□□□□□ -1.8
SYNE1-201ENST00000341594 F13A1P00488 732 aa3.82□□□□□ -1.8
SYNE1-201ENST00000341594 NSMFQ6X4W1 530 aa3.82□□□□□ -1.8
SYNE1-201ENST00000341594 FRMD6Q96NE9 622 aa3.82□□□□□ -1.8
SYNE1-201ENST00000341594 MKNK2Q9HBH9 465 aa3.82□□□□□ -1.8
SYNE1-201ENST00000341594 SEC63Q9UGP8 760 aaKnown RBP3.82□□□□□ -1.8
SYNE1-201ENST00000341594 TPCN1Q9ULQ1 816 aa3.82□□□□□ -1.8
SYNE1-201ENST00000341594 IDH3BO43837 385 aa3.81□□□□□ -1.8
SYNE1-201ENST00000341594 TSPAN9O75954 239 aa3.81□□□□□ -1.8
SYNE1-201ENST00000341594 FBXO38Q6PIJ6 1188 aa3.81□□□□□ -1.8
SYNE1-201ENST00000341594 LRRC31Q6UY01 552 aa3.81□□□□□ -1.8
SYNE1-201ENST00000341594 ALG1Q9BT22 464 aa3.81□□□□□ -1.8
SYNE1-201ENST00000341594 CCDC68Q9H2F9 335 aa3.81□□□□□ -1.8
SYNE1-201ENST00000341594 FGFR1OP2Q9NVK5 253 aa3.81□□□□□ -1.8
SYNE1-201ENST00000341594 RP1L1Q8IWN7 2480 aaPredicted RBP3.81□□□□□ -1.8
SYNE1-201ENST00000341594 SYNRGQ9UMZ2 1314 aa3.81□□□□□ -1.8
SYNE1-201ENST00000341594 O00370 1275 aa3.81□□□□□ -1.8
SYNE1-201ENST00000341594 CHMLP26374 656 aa3.81□□□□□ -1.8
SYNE1-201ENST00000341594 KRT27Q7Z3Y8 459 aa3.81□□□□□ -1.8
SYNE1-201ENST00000341594 LRRC49Q8IUZ0 686 aa3.81□□□□□ -1.8
SYNE1-201ENST00000341594 GIMAP4Q9NUV9 329 aa3.81□□□□□ -1.8
SYNE1-201ENST00000341594 KIAA1468Q9P260 1216 aa3.81□□□□□ -1.8
SYNE1-201ENST00000341594 TBX4P57082 545 aa3.81□□□□□ -1.8
SYNE1-201ENST00000341594 RPS6P62753 249 aaKnown RBP3.81□□□□□ -1.8
SYNE1-201ENST00000341594 ROR2Q01974 943 aaKnown RBP3.81□□□□□ -1.8
SYNE1-201ENST00000341594 MAGEE1Q9HCI5 957 aa3.81□□□□□ -1.8
SYNE1-201ENST00000341594 TIMMDC1Q9NPL8 285 aa3.81□□□□□ -1.8
SYNE1-201ENST00000341594 DISC1Q9NRI5 854 aa3.81□□□□□ -1.8
SYNE1-201ENST00000341594 C3P01024 1663 aa3.81□□□□□ -1.8
SYNE1-201ENST00000341594 GOLGA8QA0A0J9YX86 632 aa3.81□□□□□ -1.8
SYNE1-201ENST00000341594 GOLGA8OA6NCC3 632 aa3.81□□□□□ -1.8
SYNE1-201ENST00000341594 GOLGA8NF8WBI6 632 aa3.81□□□□□ -1.8
SYNE1-201ENST00000341594 GOLPH3LQ9H4A5 285 aa3.81□□□□□ -1.8
SYNE1-201ENST00000341594 PCIF1Q9H4Z3 704 aa3.81□□□□□ -1.8
SYNE1-201ENST00000341594 SENP2Q9HC62 589 aa3.81□□□□□ -1.8
SYNE1-201ENST00000341594 METTL5Q9NRN9 209 aaKnown RBP3.81□□□□□ -1.8
SYNE1-201ENST00000341594 ADORA1P30542 326 aa3.81□□□□□ -1.8
SYNE1-201ENST00000341594 ITGA9Q13797 1035 aa3.81□□□□□ -1.8
SYNE1-201ENST00000341594 SLC35F6Q8N357 371 aa3.81□□□□□ -1.8
SYNE1-201ENST00000341594 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.81□□□□□ -1.8
SYNE1-201ENST00000341594 RERGLQ9H628 205 aa3.81□□□□□ -1.8
SYNE1-201ENST00000341594 FBXL5Q9UKA1 691 aa3.81□□□□□ -1.8
SYNE1-201ENST00000341594 SYCP3Q8IZU3 236 aa3.81□□□□□ -1.8
SYNE1-201ENST00000341594 NR1H4Q96RI1 486 aaPredicted RBP3.81□□□□□ -1.8
SYNE1-201ENST00000341594 ARHGAP10A1A4S6 786 aa3.81□□□□□ -1.8
SYNE1-201ENST00000341594 GRID2IPA4D2P6 1211 aa3.81□□□□□ -1.8
SYNE1-201ENST00000341594 PECAM1P16284 738 aaPredicted RBP3.81□□□□□ -1.8
SYNE1-201ENST00000341594 STK4Q13043 487 aa3.81□□□□□ -1.8
SYNE1-201ENST00000341594 FAM186BQ8IYM0 893 aa3.81□□□□□ -1.8
SYNE1-201ENST00000341594 KRT23Q9C075 422 aa3.81□□□□□ -1.8
SYNE1-201ENST00000341594 MRPL11Q9Y3B7 192 aaKnown RBP3.81□□□□□ -1.8
SYNE1-201ENST00000341594 ZBTB11O95625 1053 aaPredicted RBP3.81□□□□□ -1.8
SYNE1-201ENST00000341594 CPA2P48052 419 aa3.81□□□□□ -1.8
SYNE1-201ENST00000341594 RRAGAQ7L523 313 aa3.81□□□□□ -1.8
SYNE1-201ENST00000341594 AFAP1Q8N556 730 aa3.81□□□□□ -1.8
SYNE1-201ENST00000341594 DRAXINQ8NBI3 349 aaPredicted RBP3.81□□□□□ -1.8
SYNE1-201ENST00000341594 RALGAPA2Q2PPJ7 1873 aa3.81□□□□□ -1.8
SYNE1-201ENST00000341594 C5P01031 1676 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms