RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 DLEC1Q9Y238 1755 aa12.9□□□□□ -0.34
RTN3-203ENST00000341307 ADAMTS3O15072 1205 aa12.9□□□□□ -0.34
RTN3-203ENST00000341307 TSPY3P0CV98 308 aa12.9□□□□□ -0.34
RTN3-203ENST00000341307 TSPY8P0CW00 308 aa12.9□□□□□ -0.34
RTN3-203ENST00000341307 RARAP10276 462 aa12.9□□□□□ -0.34
RTN3-203ENST00000341307 ATP6V1C1P21283 382 aa12.9□□□□□ -0.34
RTN3-203ENST00000341307 SCNN1DP51172 638 aa12.9□□□□□ -0.34
RTN3-203ENST00000341307 RASSF7Q02833 373 aa12.9□□□□□ -0.34
RTN3-203ENST00000341307 DPP8Q6V1X1 898 aaPredicted RBP12.9□□□□□ -0.34
RTN3-203ENST00000341307 ARHGAP27Q6ZUM4 889 aa12.9□□□□□ -0.34
RTN3-203ENST00000341307 STAG2Q8N3U4 1231 aa12.9□□□□□ -0.34
RTN3-203ENST00000341307 AGAP3Q96P47 875 aa12.9□□□□□ -0.34
RTN3-203ENST00000341307 NUP88Q99567 741 aaPredicted RBP12.9□□□□□ -0.34
RTN3-203ENST00000341307 SPATA7Q9P0W8 599 aa12.9□□□□□ -0.34
RTN3-203ENST00000341307 DLGAP2Q9P1A6 1054 aa12.9□□□□□ -0.34
RTN3-203ENST00000341307 KCNH3Q9ULD8 1083 aa12.9□□□□□ -0.34
RTN3-203ENST00000341307 ZMYND8Q9ULU4 1186 aaPredicted RBP12.9□□□□□ -0.34
RTN3-203ENST00000341307 FLT1P17948 1338 aa12.9□□□□□ -0.35
RTN3-203ENST00000341307 ESYT3A0FGR9 886 aa12.89□□□□□ -0.35
RTN3-203ENST00000341307 IGF2BP3O00425 579 aaKnown RBP eCLIP12.89□□□□□ -0.35
RTN3-203ENST00000341307 PRPF3O43395 683 aaKnown RBP12.89□□□□□ -0.35
RTN3-203ENST00000341307 DDAH1O94760 285 aa12.89□□□□□ -0.35
RTN3-203ENST00000341307 KRT9P35527 623 aa12.89□□□□□ -0.35
RTN3-203ENST00000341307 PPP2R2AP63151 447 aa12.89□□□□□ -0.35
RTN3-203ENST00000341307 POSTNQ15063 836 aa12.89□□□□□ -0.35
RTN3-203ENST00000341307 CMPK2Q5EBM0 449 aa12.89□□□□□ -0.35
RTN3-203ENST00000341307 ZNF662Q6ZS27 426 aa12.89□□□□□ -0.35
RTN3-203ENST00000341307 APBB1IPQ7Z5R6 666 aaPredicted RBP12.89□□□□□ -0.35
RTN3-203ENST00000341307 TMCO1Q9UM00 188 aa12.89□□□□□ -0.35
RTN3-203ENST00000341307 STX8Q9UNK0 236 aa12.89□□□□□ -0.35
RTN3-203ENST00000341307 DAGLAQ9Y4D2 1042 aa12.89□□□□□ -0.35
RTN3-203ENST00000341307 GMEB1Q9Y692 573 aa12.89□□□□□ -0.35
RTN3-203ENST00000341307 CNTNAP5Q8WYK1 1306 aa12.89□□□□□ -0.35
RTN3-203ENST00000341307 NAV1Q8NEY1 1877 aa12.89□□□□□ -0.35
RTN3-203ENST00000341307 MYH6P13533 1939 aa12.89□□□□□ -0.35
RTN3-203ENST00000341307 CDK5RAP2Q96SN8 1893 aa12.89□□□□□ -0.35
RTN3-203ENST00000341307 WNT7AO00755 349 aa12.89□□□□□ -0.35
RTN3-203ENST00000341307 PPP6R2O75170 966 aa12.89□□□□□ -0.35
RTN3-203ENST00000341307 ERCC5P28715 1186 aaPredicted RBP12.89□□□□□ -0.35
RTN3-203ENST00000341307 ZNF444Q8N0Y2 327 aaPredicted RBP12.89□□□□□ -0.35
RTN3-203ENST00000341307 NOC3LQ8WTT2 800 aaKnown RBP12.89□□□□□ -0.35
RTN3-203ENST00000341307 C7orf43Q8WVR3 580 aa12.89□□□□□ -0.35
RTN3-203ENST00000341307 PURBQ96QR8 312 aaKnown RBP12.89□□□□□ -0.35
RTN3-203ENST00000341307 FOXP1Q9H334 677 aaPredicted RBP12.89□□□□□ -0.35
RTN3-203ENST00000341307 DBNDD1Q9H9R9 158 aa12.89□□□□□ -0.35
RTN3-203ENST00000341307 NKX1-2Q9UD57 310 aaPredicted RBP12.89□□□□□ -0.35
RTN3-203ENST00000341307 DUSP10Q9Y6W6 482 aa12.89□□□□□ -0.35
RTN3-203ENST00000341307 H0YGN5 161 aa12.88□□□□□ -0.35
RTN3-203ENST00000341307 CALM1P0DP23 149 aa12.88□□□□□ -0.35
RTN3-203ENST00000341307 CALM2P0DP24 149 aa12.88□□□□□ -0.35
RTN3-203ENST00000341307 CALM3P0DP25 149 aa12.88□□□□□ -0.35
RTN3-203ENST00000341307 NAT1P18440 290 aa12.88□□□□□ -0.35
RTN3-203ENST00000341307 RASA1P20936 1047 aa12.88□□□□□ -0.35
RTN3-203ENST00000341307 SF3A3Q12874 501 aaKnown RBP eCLIP12.88□□□□□ -0.35
RTN3-203ENST00000341307 BTG3Q14201 252 aaPredicted RBP12.88□□□□□ -0.35
RTN3-203ENST00000341307 ITIH4Q14624 930 aa12.88□□□□□ -0.35
RTN3-203ENST00000341307 KIAA0753Q2KHM9 967 aa12.88□□□□□ -0.35
RTN3-203ENST00000341307 SPATA1Q5VX52 437 aa12.88□□□□□ -0.35
RTN3-203ENST00000341307 C8orf74Q6P047 294 aa12.88□□□□□ -0.35
RTN3-203ENST00000341307 PNMA1Q8ND90 353 aa12.88□□□□□ -0.35
RTN3-203ENST00000341307 CHMP6Q96FZ7 201 aa12.88□□□□□ -0.35
RTN3-203ENST00000341307 ABCF3Q9NUQ8 709 aa12.88□□□□□ -0.35
RTN3-203ENST00000341307 TSKSQ9UJT2 592 aa12.88□□□□□ -0.35
RTN3-203ENST00000341307 NFS1Q9Y697 457 aa12.88□□□□□ -0.35
RTN3-203ENST00000341307 PALM3A6NDB9 673 aaPredicted RBP12.88□□□□□ -0.35
RTN3-203ENST00000341307 FAM200BP0CF97 657 aa12.88□□□□□ -0.35
RTN3-203ENST00000341307 SLURP2P0DP57 97 aa12.88□□□□□ -0.35
RTN3-203ENST00000341307 FUT4P22083 530 aa12.88□□□□□ -0.35
RTN3-203ENST00000341307 PCK1P35558 622 aa12.88□□□□□ -0.35
RTN3-203ENST00000341307 STX17P56962 302 aa12.88□□□□□ -0.35
RTN3-203ENST00000341307 KLC1Q07866 573 aa12.88□□□□□ -0.35
RTN3-203ENST00000341307 PPP2R5BQ15173 497 aa12.88□□□□□ -0.35
RTN3-203ENST00000341307 STYK1Q6J9G0 422 aa12.88□□□□□ -0.35
RTN3-203ENST00000341307 TRPM8Q7Z2W7 1104 aa12.88□□□□□ -0.35
RTN3-203ENST00000341307 GRAMD1CQ8IYS0 662 aa12.88□□□□□ -0.35
RTN3-203ENST00000341307 OR2W6PQ8NHA6 318 aa12.88□□□□□ -0.35
RTN3-203ENST00000341307 AZIN2Q96A70 460 aa12.88□□□□□ -0.35
RTN3-203ENST00000341307 CTAGE1Q96RT6 745 aa12.88□□□□□ -0.35
RTN3-203ENST00000341307 PHF20Q9BVI0 1012 aa12.88□□□□□ -0.35
RTN3-203ENST00000341307 COA1Q9GZY4 146 aa12.88□□□□□ -0.35
RTN3-203ENST00000341307 CPVLQ9H3G5 476 aa12.88□□□□□ -0.35
RTN3-203ENST00000341307 TUBGCP4Q9UGJ1 667 aa12.88□□□□□ -0.35
RTN3-203ENST00000341307 TMEM98Q9Y2Y6 226 aa12.88□□□□□ -0.35
RTN3-203ENST00000341307 ROBO3Q96MS0 1386 aa12.87□□□□□ -0.35
RTN3-203ENST00000341307 FAM205AQ6ZU69 1335 aa12.87□□□□□ -0.35
RTN3-203ENST00000341307 GCOM1H8Y6P7 765 aaPredicted RBP12.87□□□□□ -0.35
RTN3-203ENST00000341307 KRT86O43790 486 aa12.87□□□□□ -0.35
RTN3-203ENST00000341307 CAPN15O75808 1086 aa12.87□□□□□ -0.35
RTN3-203ENST00000341307 MYZAPP0CAP1 466 aa12.87□□□□□ -0.35
RTN3-203ENST00000341307 GOLGA8HP0CJ92 632 aa12.87□□□□□ -0.35
RTN3-203ENST00000341307 CD44P16070 742 aaKnown RBP12.87□□□□□ -0.35
RTN3-203ENST00000341307 CCT6AP40227 531 aaKnown RBP12.87□□□□□ -0.35
RTN3-203ENST00000341307 CDK8P49336 464 aa12.87□□□□□ -0.35
RTN3-203ENST00000341307 PIGWQ7Z7B1 504 aa12.87□□□□□ -0.35
RTN3-203ENST00000341307 IFT20Q8IY31 132 aa12.87□□□□□ -0.35
RTN3-203ENST00000341307 SMYD1Q8NB12 490 aa12.87□□□□□ -0.35
RTN3-203ENST00000341307 IFT81Q8WYA0 676 aa12.87□□□□□ -0.35
RTN3-203ENST00000341307 ZNF317Q96PQ6 595 aaPredicted RBP12.87□□□□□ -0.35
RTN3-203ENST00000341307 PLCB1Q9NQ66 1216 aa12.87□□□□□ -0.35
RTN3-203ENST00000341307 RBM12Q9NTZ6 932 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms